Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_C16
(675 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39285| Best HMM Match : Proteasome (HMM E-Value=0) 136 2e-32
SB_47434| Best HMM Match : Proteasome (HMM E-Value=4.3e-17) 95 3e-20
SB_31216| Best HMM Match : Proteasome (HMM E-Value=2.8e-35) 77 1e-14
SB_40084| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 9e-10
SB_40821| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_46004| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_40390| Best HMM Match : BON (HMM E-Value=0.68) 31 1.1
SB_59068| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_19824| Best HMM Match : zf-C2H2 (HMM E-Value=1.4e-26) 30 1.5
SB_10931| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_56940| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.4
SB_22569| Best HMM Match : NAF (HMM E-Value=6.2) 29 3.4
SB_16120| Best HMM Match : efhand (HMM E-Value=0.0059) 29 3.4
SB_38811| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 29 4.5
SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35) 29 4.5
SB_1748| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_17008| Best HMM Match : Galactosyl_T (HMM E-Value=3.6e-30) 29 4.5
SB_14695| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_57821| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_50741| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_166| Best HMM Match : Myb_DNA-binding (HMM E-Value=6.7) 28 6.0
SB_58926| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_54622| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42) 28 7.9
SB_20998| Best HMM Match : Extensin_2 (HMM E-Value=0.002) 28 7.9
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_58418| Best HMM Match : DUF1110 (HMM E-Value=3.7) 28 7.9
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_15475| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 28 7.9
SB_14403| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_39285| Best HMM Match : Proteasome (HMM E-Value=0)
Length = 215
Score = 136 bits (328), Expect = 2e-32
Identities = 66/160 (41%), Positives = 96/160 (60%), Gaps = 1/160 (0%)
Frame = +1
Query: 4 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 183
Y ++T FSP G L Q+EYA AV G T+VG++ +N VV+ E K + L + +V K+
Sbjct: 5 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGNNIVVLGVERKAVAKLQEPRTVRKI 64
Query: 184 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSG 363
+ H+ M ++G+ D R+LV +AR Q + L +P+ + + +AT+ Q YTQS
Sbjct: 65 CTLDDHVLMAFAGLTADARILVNKARVECQSHKLTVEDPVTLEYITRFIATLKQRYTQSN 124
Query: 364 GVRPFGVSLLICGWEND-RPYLFQCDPSGAYFAWKATAMG 480
G RPFG+S LI G++ D P L+Q DPSG Y AWK G
Sbjct: 125 GRRPFGISTLIVGFDFDGTPRLYQTDPSGTYHAWKVVQSG 164
>SB_47434| Best HMM Match : Proteasome (HMM E-Value=4.3e-17)
Length = 308
Score = 95.5 bits (227), Expect = 3e-20
Identities = 49/132 (37%), Positives = 72/132 (54%)
Frame = +1
Query: 1 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 180
RY S + FSP G++ Q+EYA AV GT++ I+ +GVV E S LY+ + +
Sbjct: 136 RYDLSASQFSPDGRVFQVEYANKAVENSGTAIAIRCKDGVVFGVEKLVLSKLYEYGANKR 195
Query: 181 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 360
+ I HIGM +G+ D R +V AR+ A Y +Y PIP LV RV+ + +T
Sbjct: 196 IFHIDTHIGMAIAGLIADSRQIVATAREEAANYRSVYGSPIPLKYLVNRVSGFIHAFTLY 255
Query: 361 GGVRPFGVSLLI 396
+RPFG + +
Sbjct: 256 SAMRPFGCRIYV 267
>SB_31216| Best HMM Match : Proteasome (HMM E-Value=2.8e-35)
Length = 224
Score = 77.4 bits (182), Expect = 1e-14
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 6/223 (2%)
Frame = +1
Query: 16 LTTFSPSGKLVQIEYALAAVAAGG-TSVGIKASNGVVIATENKHKSILYDEHSVNKVEMI 192
+T FSP G+L + GG TSVGI+ ++ V+ T+ KV +
Sbjct: 13 ITIFSPEGRLYPSRVCFSGDQPGGLTSVGIRGADSAVVVTQK-------------KVPLP 59
Query: 193 TGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSGGVR 372
D R V +AR A + + IP L +R+A + Q YTQ+ +R
Sbjct: 60 IPQA---------DSRSQVQRARYEAANWKYKFGYEIPVDMLCKRIADISQVYTQNAEMR 110
Query: 373 PFGVSLLICGWENDR-PYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED--LELD 543
P G +++ G + ++ P L++ DP+G + +KA ++G +FLEK+ + +
Sbjct: 111 PLGCGMILIGIDEEKGPQLYKTDPAGYFCGFKACSVGVKQTEANSFLEKKVKKKHAWTFN 170
Query: 544 DAVHTAILTLKEGFEGQMTADNIEVGI--CDASGFRRLEPAHV 666
+ V TAI L +EVG+ D FR+L A +
Sbjct: 171 ETVETAISCLSSVLSADFKPSELEVGVVSMDNPRFRKLTEAEI 213
>SB_40084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 60.9 bits (141), Expect = 9e-10
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = +1
Query: 364 GVRPFGVSLLICGWENDRPYLFQCDPSGAY 453
GVRPFGVSLL+ GW++DRPYLFQCDPS ++
Sbjct: 2 GVRPFGVSLLVAGWDDDRPYLFQCDPSESF 31
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = +1
Query: 577 EGFEGQMTADNIEVGICDASGFRRLEPAHVKDY 675
E FEGQMT DNIE+G+C+ +GFRRL P VKDY
Sbjct: 29 ESFEGQMTEDNIELGVCNENGFRRLTPPEVKDY 61
>SB_40821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Frame = +1
Query: 418 PYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTE---DLELDDAVHTAILTLKEGF- 585
P++FQ PS YF KA A+G + +T+LEK Y + D E ++ + + L+E
Sbjct: 4 PHIFQTCPSANYFDCKAMAIGARSQSARTYLEK-YLDAFGDCEPEELIKHGLKALRETLP 62
Query: 586 -EGQMTADNIEVGI 624
E ++T N +G+
Sbjct: 63 NEQELTTKNCSIGL 76
>SB_46004| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 78
Score = 35.5 bits (78), Expect = 0.040
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 232 DYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFG 381
D R V +AR A + + IP L +RVA + Q YTQ+ +RP G
Sbjct: 27 DSRSQVQRARYEAANWKYKFGYEIPVDMLCKRVADISQVYTQNAEMRPLG 76
>SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = -3
Query: 661 EPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSF 512
+P P G H P Y T P A G P GQH P P Y +
Sbjct: 603 QPSPPHGGHPHHPPPTGYPGGYPGTHTAPPAGGYPTGQHPPPPPAGYPGY 652
>SB_40390| Best HMM Match : BON (HMM E-Value=0.68)
Length = 561
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 324 ASGDRHARIYSIRRRPSFRRFVTDLRLGERSPLLIPVRSVGRVLRLEG 467
A G + + S +RR SF + TD G+ SPL S R+LRL G
Sbjct: 194 AIGHESSSVMSSKRRRSFLDYDTDPTSGQTSPL--SPSSASRILRLPG 239
>SB_59068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = -3
Query: 658 PVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVP 533
P P SG L H YP PSS P S SG C HP P
Sbjct: 93 PPPPSGRCLAHPYPFSQKAPSSTTSPPLSPSGR-C-LAHPYP 132
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = -3
Query: 673 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPR 524
S + P+ SG L H YP PSS PP C HP P R
Sbjct: 114 STTSPPLSPSGRCLAHPYPFSQKAPSSTTSPPPPG----CYLAHPYPFSR 159
>SB_19824| Best HMM Match : zf-C2H2 (HMM E-Value=1.4e-26)
Length = 550
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 215 TPAWALIIVCSSHKPGKWPNSTT 283
TP +I+ + +PGKWPN+TT
Sbjct: 260 TPQGQIILTQETLEPGKWPNNTT 282
>SB_10931| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/61 (19%), Positives = 27/61 (44%)
Frame = +1
Query: 391 LICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILT 570
+ICGW+ P L+ D G + + ++G ++ Y D+ ++A + +
Sbjct: 154 MICGWDKKGPGLYYVDSDGTRLSNQMFSVGSGSTYAYGVMDSGYKYDMSPEEAYDLGVRS 213
Query: 571 L 573
+
Sbjct: 214 I 214
>SB_56940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1981
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = -1
Query: 636 ACVTNTHFDIIRRHLTLEPLLQRQDRRVDSIIQFQILGIPLFQER 502
AC TNT F+ + LTL+P + R++S + F LG+ L + +
Sbjct: 1660 ACFTNTSFNYLGNSLTLQPNNRVDLSRMESALSF--LGLDLTENQ 1702
>SB_49284| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1041
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Frame = -3
Query: 661 EPVPVSGTRLRHKYPLRYYPPSSDP----RTP--PSASGSPCGQHHPVP 533
EP+P + T + K ++Y PP P ++P PS +G+P + HP P
Sbjct: 394 EPIP-NATPIMAKDAVKYEPPQQQPQQQRQSPPQPSPTGAPPQRPHPPP 441
>SB_22569| Best HMM Match : NAF (HMM E-Value=6.2)
Length = 307
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 240 SARHTSQENGPTVLPDVPRADTHSAV 317
+++HT+QENG LPD+ +T+ AV
Sbjct: 108 NSKHTAQENGLLNLPDITLRNTNLAV 133
>SB_16120| Best HMM Match : efhand (HMM E-Value=0.0059)
Length = 399
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -3
Query: 652 PVSG--TRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 527
PV G T RH Y YY SS +P ++ P G HH P P
Sbjct: 258 PVDGIITGHRHTYHYHYYTSSSSLPSPQTSP--PGGWHHYRPSP 299
>SB_38811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 619 PLRYYPPSSDPRTPPSASGSPCG-QHHPVPDPRYTSFPG 506
P Y PP+++P P G+P G Q P +P + FPG
Sbjct: 480 PQAYCPPTNNPMFRP-FPGNPQGYQQPPTNNPMFRPFPG 517
>SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 3/57 (5%)
Frame = -3
Query: 670 PSREPVPVSGTRLRH---KYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFP 509
P P P +G + H K L PP + PP P +H P P +S P
Sbjct: 700 PLPPPPPPTGIDIPHSPSKDDLPLPPPPEEVSLPPPDESPPSSKHPPTVSPSSSSAP 756
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 604 PPSSDPRTPPSASGSPCGQHHPVP 533
PP+S P P SG P Q HP P
Sbjct: 90 PPTSQPYGAPPTSGYPGYQQHPPP 113
>SB_30707| Best HMM Match : ARID (HMM E-Value=4e-35)
Length = 1338
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 463 KATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKEGFEGQMTADNIE 615
+A G F+ KT +DLE DA+H +L + G E + + D +E
Sbjct: 1178 QADPTGLEFHTEKTDENLLKEDDLETKDALHKDVLNEERGIEKENSFDWLE 1228
>SB_1748| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -3
Query: 673 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQH 545
SPS PVS R + P R+ PR P P +H
Sbjct: 449 SPSPAKTPVSMRTAREESPYRWLTEKKSPRPEPQGCDYPDNEH 491
>SB_17008| Best HMM Match : Galactosyl_T (HMM E-Value=3.6e-30)
Length = 508
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -3
Query: 670 PSREPVPV-SGTRLRHKYPLRYYPP 599
P R P+ + TR R+ YP RYYPP
Sbjct: 470 PYRYYPPIDTTTRYRYYYPYRYYPP 494
>SB_14695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = -3
Query: 670 PSREPVPVSGTRLRHKYPLRYY---PPSSDPRTPPSASGSPCGQHHPVP 533
P P+PV ++ YP +Y PP P PPS SP ++ +P
Sbjct: 128 PYPGPLPVLSPQVYRGYPFQYPGTPPPPMYPAFPPSFPSSPPPEYPGLP 176
>SB_57821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -3
Query: 613 RYYPPSSDPRT-PPSASGSPCGQ-HHPVPDPRYTSFP 509
R YP DP PS G P P DPRY S+P
Sbjct: 571 RRYPARPDPMGYSPSEMGVPSSPLPRPASDPRYGSYP 607
>SB_50741| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/78 (28%), Positives = 31/78 (39%)
Frame = +1
Query: 397 CGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLK 576
C W P + P A+ AW +A G L KR D +T L +
Sbjct: 459 CCWPTATPSI----PDPAFDAWTDSAAEGTPITGIVALRKRKPSG-SCADTFNTIALQTR 513
Query: 577 EGFEGQMTADNIEVGICD 630
EG E Q+ +++ G CD
Sbjct: 514 EGTERQVKTCSLKDGRCD 531
>SB_166| Best HMM Match : Myb_DNA-binding (HMM E-Value=6.7)
Length = 380
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 25 FSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 183
+ +GKLV E+ + A TSV + ++T LY +H VNKV
Sbjct: 210 YGTTGKLVNDEFRVMR-ALNATSVATSLLSNTNVSTPLNGTFFLYRDHLVNKV 261
>SB_58926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2371
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = +3
Query: 186 NDYWPYRNGVLRHGP*LSSARHTSQENGPTVLPDVPRADTHSAVGPASGDRHARIYSIRR 365
ND++ G L G SA + E L V R + G +GD+ ++YS+ +
Sbjct: 2070 NDFYSASAGRLYDGSSWCSATSSQAEYLQVDLGRVTRVTGIATQGSPTGDKWVKLYSVEQ 2129
Query: 366 RPSFRRFVTDLRLGERS 416
F T+ GE S
Sbjct: 2130 SDD-GHFFTEYTAGESS 2145
>SB_54622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = -3
Query: 664 REPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFP 509
R PV V RL + R +S+P S PCGQ+ P PR+ P
Sbjct: 42 RHPVHVQALRLSRGFSGRAVFSASNPSF--FLSSFPCGQYAPGVAPRFLQGP 91
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/42 (30%), Positives = 18/42 (42%)
Frame = -3
Query: 664 REPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHP 539
R +P + + K PL YPP + P+T P P P
Sbjct: 639 RPSLPGTPPETKTKPPLAPYPPKTSPKTTPKPHIPPAPSRPP 680
>SB_28550| Best HMM Match : Fer2_2 (HMM E-Value=2.49992e-42)
Length = 1644
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +1
Query: 154 LYDEHSVNKVEMITGHIGM-VYSGMGP 231
L +EHS NKV+M+ G+ G +Y GP
Sbjct: 367 LLEEHSNNKVKMVGGNTGKGIYKKDGP 393
>SB_20998| Best HMM Match : Extensin_2 (HMM E-Value=0.002)
Length = 765
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -3
Query: 613 RYYPPSSDPRTPPSASGSPCGQHHPV--PDPRY 521
RYYP +P++ SG+P +H+P P PRY
Sbjct: 182 RYYP-YGNPQSRYYPSGNPQSRHYPSGNPQPRY 213
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Frame = -3
Query: 673 SPSREPVPVSGTR---LRHKYPLRYYPPS--SDPRTPPSASGSPCGQHHPVPDPRYT 518
SPSR+PVP T+ +R +P PS +DP+ PS + PV +P T
Sbjct: 1917 SPSRDPVPTRFTKSVPVRTSFPTWNPVPSRTADPKISPSTRKRTLSK-RPVNEPAVT 1972
>SB_58418| Best HMM Match : DUF1110 (HMM E-Value=3.7)
Length = 474
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 619 PLRYYPPSSDPRTPPSASGSPCGQHHPVPDPR 524
PLR Y +D T +AS P H PDPR
Sbjct: 433 PLRCYTKDADASTILAASKQPTQLHPDGPDPR 464
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = -3
Query: 670 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPR 524
P R+P P + P + PP S+P PP P PVP PR
Sbjct: 1043 PPRKPSPPPSA-VPIPPPRKPSPPPSEPAPPPRQPPPP-STSQPVPPPR 1089
>SB_15475| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 417
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 45 SSNRICFSGCSSRRHFRWHKSVQWCCD 125
+SN SG S R R H S WC D
Sbjct: 41 NSNITASSGSGSAREARLHNSAAWCSD 67
>SB_14403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = -3
Query: 664 REPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFP 509
R PV V RL + R +S+P S PCGQ+ P PR+ P
Sbjct: 42 RHPVHVQALRLSRGFSGRAVFSASNPSF--FLSSFPCGQYAPGVAPRFLQGP 91
>SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 604 PPSSDPRTPPSASGSPCGQHHPVPDP 527
PPS+ TP S +PC P P P
Sbjct: 357 PPSTPAPTPAPLSSTPCAPFAPPPPP 382
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,847,266
Number of Sequences: 59808
Number of extensions: 537089
Number of successful extensions: 1767
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1739
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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