Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_C16
(675 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1) (... 324 2e-89
At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putativ... 323 8e-89
At5g66140.1 68418.m08332 20S proteasome alpha subunit D2 (PAD2) ... 167 8e-42
At3g51260.1 68416.m05611 20S proteasome alpha subunit D (PAD1) 161 5e-40
At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1) (... 159 1e-39
At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2) ... 144 5e-35
At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1) ... 142 1e-34
At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1) ... 142 1e-34
At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2) ... 141 3e-34
At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1) ... 130 1e-30
At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2) ... 129 2e-30
At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1) (... 124 5e-29
At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid t... 48 6e-06
At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL... 37 0.014
At4g31300.1 68417.m04441 20S proteasome beta subunit A (PBA1) (P... 34 0.100
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 34 0.100
At2g27680.1 68415.m03354 aldo/keto reductase family protein cont... 31 0.70
At1g27880.1 68414.m03416 ATP-dependent DNA helicase, putative si... 31 0.70
At3g01560.1 68416.m00086 proline-rich family protein contains pr... 31 0.93
At2g36800.1 68415.m04513 UDP-glucoronosyl/UDP-glucosyl transfera... 30 1.2
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 30 1.2
At5g26200.1 68418.m03118 mitochondrial substrate carrier family ... 29 2.1
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 29 2.1
At2g38410.1 68415.m04718 VHS domain-containing protein / GAT dom... 29 2.1
At2g36750.1 68415.m04508 UDP-glucoronosyl/UDP-glucosyl transfera... 29 2.1
At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family... 29 3.8
At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family... 29 3.8
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 29 3.8
At3g10720.2 68416.m01291 pectinesterase, putative contains simil... 29 3.8
At5g67460.1 68418.m08505 glycosyl hydrolase family protein 17 si... 28 5.0
At4g35560.1 68417.m05053 expressed protein 28 5.0
At1g70985.1 68414.m08189 hydroxyproline-rich glycoprotein family... 28 5.0
At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic... 28 5.0
At3g47500.1 68416.m05166 Dof-type zinc finger domain-containing ... 28 6.6
At2g36790.1 68415.m04512 UDP-glucoronosyl/UDP-glucosyl transfera... 28 6.6
At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic... 28 6.6
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 27 8.7
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 27 8.7
At4g24020.1 68417.m03452 RWP-RK domain-containing protein simila... 27 8.7
At4g23882.1 68417.m03434 heavy-metal-associated domain-containin... 27 8.7
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 27 8.7
At4g14290.1 68417.m02202 expressed protein contains Interpro ent... 27 8.7
At3g04370.1 68416.m00462 hypothetical protein contains Pfam prof... 27 8.7
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 27 8.7
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 27 8.7
At1g10620.1 68414.m01204 protein kinase family protein contains ... 27 8.7
>At1g16470.1 68414.m01970 20S proteasome alpha subunit B (PAB1)
(PRC3) identical to proteasome subunit alpha type 2
SP:O23708, GI:6093778; identical to cDNA proteasome
subunit prc3 GI:2511573
Length = 235
Score = 324 bits (797), Expect = 2e-89
Identities = 154/226 (68%), Positives = 188/226 (83%), Gaps = 1/226 (0%)
Frame = +1
Query: 1 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 180
+YSFSLTTFSPSGKLVQIE+AL AV +G TS+GIKASNGVVIATE K SIL DE SV K
Sbjct: 5 QYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQK 64
Query: 181 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 360
++ +T +IG+VYSGMGPD+R+LV ++RK A+QY +Y EPIP QLV+ ATVMQE+TQS
Sbjct: 65 IQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQS 124
Query: 361 GGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLEL 540
GGVRPFGVSLL+ G+++ P L+Q DPSG+YF+WKA+AMGKN +N KTFLEKRYTED+EL
Sbjct: 125 GGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMEL 184
Query: 541 DDAVHTAILTLKEGFEGQMTADNIEVGICDASG-FRRLEPAHVKDY 675
DDA+HTAILTLKEGFEG++++ NIE+G A FR L PA + DY
Sbjct: 185 DDAIHTAILTLKEGFEGEISSKNIEIGKIGADKVFRVLTPAEIDDY 230
>At1g79210.1 68414.m09235 20S proteasome alpha subunit B, putative
nearly identical to SP|O23708 Proteasome subunit alpha
type 2 (EC 3.4.25.1) (20S proteasome alpha subunit B)
{Arabidopsis thaliana} and to At1g16470
Length = 235
Score = 323 bits (793), Expect = 8e-89
Identities = 154/226 (68%), Positives = 187/226 (82%), Gaps = 1/226 (0%)
Frame = +1
Query: 1 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 180
+YSFSLTTFSPSGKLVQIE+AL AV +G TS+GIKASNGVVIATE K SIL DE SV K
Sbjct: 5 QYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQK 64
Query: 181 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 360
++ +T +IG VYSGMGPD+R+LV ++RK A+QY +Y EPIP QLV+ ATVMQE+TQS
Sbjct: 65 IQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQS 124
Query: 361 GGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLEL 540
GGVRPFGVSLL+ G+++ P L+Q DPSG+YF+WKA+AMGKN +N KTFLEKRYTED+EL
Sbjct: 125 GGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMEL 184
Query: 541 DDAVHTAILTLKEGFEGQMTADNIEVG-ICDASGFRRLEPAHVKDY 675
DDA+HTAILTLKEGFEG++++ NIE+G I FR L PA + DY
Sbjct: 185 DDAIHTAILTLKEGFEGEISSKNIEIGKIGTDKVFRVLTPAEIDDY 230
>At5g66140.1 68418.m08332 20S proteasome alpha subunit D2 (PAD2)
(PRS1) (PRC6) identical to SP|O24616 Proteasome subunit
alpha type 7-2 (EC 3.4.25.1) (20S proteasome alpha
subunit D2) {Arabidopsis thaliana}
Length = 250
Score = 167 bits (405), Expect = 8e-42
Identities = 90/226 (39%), Positives = 131/226 (57%), Gaps = 4/226 (1%)
Frame = +1
Query: 1 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 180
RY ++T FSP G L Q+EYAL AV G +VG++ ++ VV+A E K L D S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 181 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 360
+ + HI + +G+ D R+L+ +AR Q + L +P+ + + +A + Q+YTQS
Sbjct: 63 IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQS 122
Query: 361 GGVRPFGVSLLICGWE--NDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDL 534
GGVRPFG+S LI G++ + P L+Q DPSG + AWKA A G+N N+ + FLEK Y E
Sbjct: 123 GGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKES- 181
Query: 535 ELDDAVHTAILTLKEGFEGQMTADNIEVGIC--DASGFRRLEPAHV 666
+ + AI L E E NIEV + + +G R+LE A +
Sbjct: 182 SGQETIKLAIRALLEVVES--GGKNIEVAVMTREETGLRQLEEAEI 225
>At3g51260.1 68416.m05611 20S proteasome alpha subunit D (PAD1)
Length = 250
Score = 161 bits (390), Expect = 5e-40
Identities = 86/210 (40%), Positives = 121/210 (57%), Gaps = 2/210 (0%)
Frame = +1
Query: 1 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 180
RY ++T FSP G L Q+EYAL AV G +VG++ ++ VV+A E K L D S K
Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARK 62
Query: 181 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 360
+ + HI + +G+ D R+L+ +AR Q + L +P+ + + +A + Q+YTQS
Sbjct: 63 IVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQS 122
Query: 361 GGVRPFGVSLLICGWE--NDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDL 534
GGVRPFG+S LI G++ P L+Q DPSG + AWKA A G+N N+ + FLEK Y E
Sbjct: 123 GGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESA 182
Query: 535 ELDDAVHTAILTLKEGFEGQMTADNIEVGI 624
+ V AI L E E NIEV +
Sbjct: 183 G-QETVKLAIRALLEVVES--GGKNIEVAV 209
>At3g22110.1 68416.m02791 20S proteasome alpha subunit C (PAC1)
(PRC9) identical to GB:AAC32057 from [Arabidopsis
thaliana] (Genetics (1998) 149 (2), 677-692); identical
to cDNA proteasome subunit prc9 GI:2511583
Length = 250
Score = 159 bits (387), Expect = 1e-39
Identities = 80/209 (38%), Positives = 120/209 (57%), Gaps = 3/209 (1%)
Frame = +1
Query: 1 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKS-ILYDEHSVN 177
RY T FSP G+L Q+EYA+ A+ G+++GI + +GVV+ E K S +L S
Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAE 63
Query: 178 KVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQ 357
K+ I H+ +G+ D +L+ AR AQ+Y MY EP+P QLVQ + Q YTQ
Sbjct: 64 KMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQ 123
Query: 358 SGGVRPFGVSLLICGWENDRPY-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDL 534
GG+RPFGVS L GW+ + L+ DPSG Y WKA A+G N ++ L++ Y +D
Sbjct: 124 FGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDDA 183
Query: 535 ELDDAVHTAILTLKEGFEG-QMTADNIEV 618
++AV A+ L + + +T++ +E+
Sbjct: 184 TREEAVELALKVLTKTMDSTSLTSEKLEL 212
>At2g05840.1 68415.m00632 20S proteasome alpha subunit A2 (PAA2)
identical to GB:AF043519
Length = 246
Score = 144 bits (349), Expect = 5e-35
Identities = 82/230 (35%), Positives = 125/230 (54%), Gaps = 6/230 (2%)
Frame = +1
Query: 4 YSFSLTTFSPSGKLVQIEYALAAV-AAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 180
Y +T FSP G+L Q+EYA AV AAG TS+G++ + V + T+ K L D+ SV+
Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSH 68
Query: 181 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 360
+ +T ++G++ +GM D R LV QAR A ++ Y +P L + +A Q YTQ
Sbjct: 69 LFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQH 128
Query: 361 GGVRPFGVSLLICGWENDR-PYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED-- 531
+RP GV ++ G + +R P L++CDP+G ++ KAT+ G FLEK+ E+
Sbjct: 129 AYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPA 188
Query: 532 LELDDAVHTAILTLKEGFEGQMTADNIEVGICDASG--FRRLEPAHVKDY 675
D+ V TAI L+ + A IEVG+ A FR L + ++
Sbjct: 189 FTYDETVQTAISALQSVLQEDFKATEIEVGVVRADDPLFRSLRTEEIDEH 238
>At5g35590.1 68418.m04237 20S proteasome alpha subunit A1 (PAA1)
(PRC1) identical to proteasome subunit alpha type 6-1
SP:O81146 GI:12643647 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc1 GI:2511587
Length = 246
Score = 142 bits (345), Expect = 1e-34
Identities = 83/230 (36%), Positives = 123/230 (53%), Gaps = 6/230 (2%)
Frame = +1
Query: 4 YSFSLTTFSPSGKLVQIEYALAAV-AAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 180
Y +T FSP G+L Q+EYA AV AG TS+G++ + V + T+ K L D+ SV
Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTH 68
Query: 181 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 360
+ IT +IG+V +G+ D R LV QAR A ++ Y +P L + +A Q YTQ
Sbjct: 69 LFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQH 128
Query: 361 GGVRPFGVSLLICGW-ENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTED-- 531
+RP GV ++ G E + P L++CDP+G ++ KAT+ G FLEK+ E+
Sbjct: 129 AYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPS 188
Query: 532 LELDDAVHTAILTLKEGFEGQMTADNIEVGICDASG--FRRLEPAHVKDY 675
D+ V TAI L+ + A IEVG+ A FR L ++++
Sbjct: 189 FTFDETVQTAISALQSVLQEDFKATEIEVGVVRAENPEFRALTTEEIEEH 238
>At1g53850.1 68414.m06129 20S proteasome alpha subunit E1 (PAE1)
identical to 20S proteasome subunit PAE1 GI:3421087 from
[Arabidopsis thaliana]
Length = 237
Score = 142 bits (345), Expect = 1e-34
Identities = 76/208 (36%), Positives = 115/208 (55%), Gaps = 3/208 (1%)
Frame = +1
Query: 4 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 183
Y + TFSP G+L Q+EYA+ A+ G T++G+K GVV+A E + S L + SV K+
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKI 67
Query: 184 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPI---PTAQLVQRVATVMQEYT 354
I HIG SG+ D R LV AR Q + Y EP+ T Q + +A E
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGE 127
Query: 355 QSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDL 534
+ RPFGVSLLI G + + P L+ DPSG ++ A A+G + L++++ +DL
Sbjct: 128 EESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDL 187
Query: 535 ELDDAVHTAILTLKEGFEGQMTADNIEV 618
L +A A+ LK+ E ++T +N+++
Sbjct: 188 SLQEAETIAVSILKQVMEEKVTPNNVDI 215
>At3g14290.1 68416.m01808 20S proteasome alpha subunit E2 (PAE2)
identical to 20S proteasome subunit PAE2 GB:AAC32061
from [Arabidopsis thaliana]
Length = 237
Score = 141 bits (342), Expect = 3e-34
Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 3/208 (1%)
Frame = +1
Query: 4 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 183
Y + TFSP G+L Q+EYA+ A+ G T++G+K GVV+A E + S L + SV K+
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKI 67
Query: 184 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPI---PTAQLVQRVATVMQEYT 354
I HIG SG+ D R LV AR Q + Y EP+ T Q + +A E
Sbjct: 68 MEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGE 127
Query: 355 QSGGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDL 534
+ RPFGVSLLI G + + P L+ DPSG ++ A A+G + L++++ +D+
Sbjct: 128 EESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDI 187
Query: 535 ELDDAVHTAILTLKEGFEGQMTADNIEV 618
L +A A+ LK+ E ++T +N+++
Sbjct: 188 TLQEAETIAVSILKQVMEEKVTPNNVDI 215
>At5g42790.1 68418.m05212 20S proteasome alpha subunit F1 (PAF1)
(gb|AAC32062.1)
Length = 278
Score = 130 bits (313), Expect = 1e-30
Identities = 74/226 (32%), Positives = 121/226 (53%), Gaps = 2/226 (0%)
Frame = +1
Query: 1 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 180
+Y +TT+SP+G+L Q+EYA+ AV G ++G+++ + VV+A NK +S L H K
Sbjct: 5 QYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL-SSHQ-RK 62
Query: 181 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 360
+ + HIG+ +G+ D R+L R + + Y P+P +LV +A Q TQ
Sbjct: 63 IFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQR 122
Query: 361 GGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTE--DL 534
RP+GV LL+ G + +L+ PSG YF ++A A+G KT+LE+R+ D
Sbjct: 123 SWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFGDS 182
Query: 535 ELDDAVHTAILTLKEGFEGQMTADNIEVGICDASGFRRLEPAHVKD 672
+D + AIL ++E +G + ++ +C + EP H D
Sbjct: 183 SREDLIKDAILAVRETLQG----ETLKSSLCTVAILGVDEPFHFLD 224
>At1g47250.1 68414.m05231 20S proteasome alpha subunit F2 (PAF2)
(PRC2B) (PRS1) identical to GB:AAC32063 from
[Arabidopsis thaliana] (Genetics 149 (2), 677-692
(1998)); identical to cDNA proteasome subunit prc2b
GI:2511585
Length = 277
Score = 129 bits (311), Expect = 2e-30
Identities = 72/226 (31%), Positives = 122/226 (53%), Gaps = 2/226 (0%)
Frame = +1
Query: 1 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNK 180
+Y +TT+SP+G+L Q+EYA+ AV G ++G+++ + VV+A NK +S L H K
Sbjct: 5 QYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL-SSHQ-RK 62
Query: 181 VEMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQS 360
+ + HIG+ +G+ D R+L R + + Y P+P +LV +A Q TQ
Sbjct: 63 IFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQR 122
Query: 361 GGVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYT--EDL 534
RP+GV LL+ G + +L+ PSG YF ++A A+G KT+LE+++ ++
Sbjct: 123 SWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQES 182
Query: 535 ELDDAVHTAILTLKEGFEGQMTADNIEVGICDASGFRRLEPAHVKD 672
+D + AI+ ++E +G + ++ +C S EP H D
Sbjct: 183 SKEDLIKDAIMAIRETLQG----ETLKSSLCTVSVLGVDEPFHFLD 224
>At2g27020.1 68415.m03244 20S proteasome alpha subunit G (PAG1)
(PRC8) identical to proteasome subunit alpha type 3
SP:O23715, GI:12644056 from [Arabidopsis thaliana];
identical to cDNA proteasome subunit prc8 GI:2511591
Length = 249
Score = 124 bits (299), Expect = 5e-29
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 2/213 (0%)
Frame = +1
Query: 4 YSFSLTTFSPSGKLVQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKV 183
Y S+TTFSP G++ QIEYA AV GT VGIK +G+V+ E S + S ++
Sbjct: 8 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVVGIKCKDGIVMGVEKLIASKMMLPGSNRRI 67
Query: 184 EMITGHIGMVYSGMGPDYRLLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSG 363
+ H GM +G+ D R +V +A+ A+ Y +Y + +P +L +RVA+ + T
Sbjct: 68 HSVHRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYW 127
Query: 364 GVRPFGVSLLICGWENDRPYLFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELD 543
+RPFG +++ G++ D P L+ +PSG + + A+GK KT +EK ++
Sbjct: 128 WLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGKQAAKTEIEKLNLSEMTCK 187
Query: 544 DAV-HTAILTLKEGFEGQMTADNIEVG-ICDAS 636
+ V A + K E + A +E+ IC+ S
Sbjct: 188 EGVIEVAKIIYKLHDEAKDKAFELEMSWICEES 220
>At4g15160.1 68417.m02327 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 428
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Frame = +1
Query: 241 LLVTQARKMAQQYYLMYHEPIPTAQLVQRVATVMQEYTQSGGVRPFGVSLLICGWENDRP 420
+LV +A+ ++ E T++L+Q +++ + Y V + + GW+ +
Sbjct: 312 MLVLPLEFLAKDGVVLVGEKKVTSKLLQTSSSMEKMYKIDDHV-----ACAVAGWDRNHG 366
Query: 421 Y-LFQCDPSGAYFAWKATAMGKNFNNGKTFLEKRYTEDLELDDAVHTAILTLKE 579
+ L+ DPSG Y W+A A+G N ++ L++ Y +D ++ V AI L +
Sbjct: 367 FQLYMSDPSGNYGGWQAAAVGANNQAAQSILKQDYKDDATREEVVQLAIKVLSK 420
>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
(PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
(EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
{Arabidopsis thaliana}; contains Pfam profiles: PF00614
phospholipase D.active site motif, PF00168 C2 domain
Length = 1083
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -3
Query: 664 REPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFP 509
R P P + YP Y PPSS+P PP + ++P P P Y + P
Sbjct: 7 RYPYPYGQYPYPYPYPAPYRPPSSEP-YPPPPTNQYSAPYYPYPPPPYATPP 57
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = -3
Query: 670 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQH 545
PS EP P T ++ P YPP PP AS P QH
Sbjct: 28 PSSEPYPPPPTN-QYSAPYYPYPPPPYATPPPYASPPPPHQH 68
>At4g31300.1 68417.m04441 20S proteasome beta subunit A (PBA1)
(PRCD) identical to cDNA proteasome subunit prcd
GI:2511593
Length = 233
Score = 33.9 bits (74), Expect = 0.100
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Frame = +1
Query: 82 GGTSVGIKASNGVVIATENKHKSILY-DEHSVNKVEMITGHIGMVYSGMGPDYRLLVTQA 258
G T +G+ + GVV+ +++ + +Y + +K+ +T ++ + SG D +++
Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYV 71
Query: 259 RKMAQQYYLMYHEPIP---TAQLVQRVATVMQEYTQSG 363
R Q+ + + +P +A L++ +A + Q+G
Sbjct: 72 RYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTG 109
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 33.9 bits (74), Expect = 0.100
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -3
Query: 670 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPR 524
PS +PV G P PP P+ PP+ S SPC P P P+
Sbjct: 18 PSSKPVAPPGPS-----PCPSPPPKPQPKPPPAPSPSPCPSPPPKPQPK 61
>At2g27680.1 68415.m03354 aldo/keto reductase family protein
contains Pfam profile PF00248: oxidoreductase, aldo/keto
reductase family
Length = 384
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 46 VQIEYALAAVAAGGTSVGIKASNGVVIATENKHKSILYDEHSVNKVEMIT 195
V + Y L GG+ +G++ I N S++ DE VN ++ +T
Sbjct: 315 VAVRYVLDQQGVGGSMIGVRLGLAEHIQDANAIFSLVLDEEDVNSIQEVT 364
>At1g27880.1 68414.m03416 ATP-dependent DNA helicase, putative
similar to SP|O94761 ATP-dependent DNA helicase Q4
(RecQ4) {Homo sapiens}; contains Pfam profiles PF00270:
DEAD/DEAH box helicase, PF00271: Helicase conserved
C-terminal domain
Length = 911
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 673 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDP 527
+P R+ P S +L+ P ++ PP S T S+ P HP P+P
Sbjct: 15 TPPRDSFPSSPPQLQS--PAKHVPPVSRKMTSSSSRSKPKAPTHPPPNP 61
>At3g01560.1 68416.m00086 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 511
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -3
Query: 664 REPVPVSGTRLRHK--YPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFPG 506
++P P SG + Y ++ YPP+ + PP+ S +P Q + P P+ + + G
Sbjct: 327 QQPPPSSGYNPEEQPPYQMQSYPPNPPRQQPPAGS-TPSQQFYNPPQPQPSMYDG 380
>At2g36800.1 68415.m04513 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 495
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 574 KEGFEGQMTADNIEVGICDASGFRRLEPAHVKDY 675
K+ F+G + A+ G+ + F+ LEPA+ KDY
Sbjct: 207 KDIFDGMVEANETSYGVI-VNSFQELEPAYAKDY 239
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -3
Query: 673 SPSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFP 509
S +P+PVS + L++ P PSS+ + P + P PV PR S P
Sbjct: 435 SQRSKPLPVSQS-LQNSNPFPVSQPSSNSKPFPVSQPQPASNPFPVSQPRPNSQP 488
>At5g26200.1 68418.m03118 mitochondrial substrate carrier family
protein contains Pfam profile: PF00153 mitochondrial
carrier protein
Length = 342
Score = 29.5 bits (63), Expect = 2.1
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Frame = +1
Query: 1 RYSFSLTTFSPSGKLVQIEYALAAVAAGGTSV------GIKASNGVVIATENKHKSILYD 162
RY S +G V ++ AA A+G +++ IK V+ A EN + +
Sbjct: 233 RYKHSYNHKEDAGGSVVVQALSAATASGCSALVTMPVDTIKTRLQVLDAEENGRRRAMTV 292
Query: 163 EHSVNKVEMITGHIGMVYSGMGPDYRLLVTQARKMAQQY 279
SV + M G +G Y G+GP + + A M Y
Sbjct: 293 MQSVKSL-MKEGGVGACYRGLGPRWVSMSMSATTMITTY 330
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = -3
Query: 604 PPSSDPR--TPPSASGSPCGQHHPVPDPRYTSFP 509
PP DP+ TPP+ +P P P P+ TS P
Sbjct: 46 PPQPDPQPPTPPTFQPAPPANDQPPPPPQSTSPP 79
>At2g38410.1 68415.m04718 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 671
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 601 PSSDPRTPPSASGSPCGQHHPVPDPRYTSF 512
PSS P PP A +P P PR+ S+
Sbjct: 449 PSSQPSPPPPAGSDQNTHIYPQPQPRFDSY 478
>At2g36750.1 68415.m04508 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 491
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 574 KEGFEGQMTADNIEVGICDASGFRRLEPAHVKDY 675
K+ +G DN G+ + F LEPA+V+DY
Sbjct: 203 KDFLDGMTEGDNTSYGVI-VNTFEELEPAYVRDY 235
>At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 199
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 670 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGS--PCGQHHPVP 533
P ++ P SG ++P + YPPS P+ PP ++ S P G + P P
Sbjct: 151 PPQQGYPPSGYP---QHPPQGYPPSGYPQNPPPSAYSQYPPGAYPPPP 195
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 619 PLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFP 509
P + YPPS P+ PP P G P Y+ +P
Sbjct: 152 PQQGYPPSGYPQHPPQGY-PPSGYPQNPPPSAYSQYP 187
>At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 255
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 670 PSREPVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGS--PCGQHHPVP 533
P ++ P SG ++P + YPPS P+ PP ++ S P G + P P
Sbjct: 207 PPQQGYPPSGYP---QHPPQGYPPSGYPQNPPPSAYSQYPPGAYPPPP 251
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 619 PLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFP 509
P + YPPS P+ PP P G P Y+ +P
Sbjct: 208 PQQGYPPSGYPQHPPQGY-PPSGYPQNPPPSAYSQYP 243
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 7/57 (12%)
Frame = -3
Query: 652 PVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPC-----GQHH--PVPDPRYTSFPGT 503
PV+ T H + R PP P PP P G HH P P P T+ P T
Sbjct: 136 PVTTTTAGHHHHRRSPPPPPPPPPPPPTITPPVTTTTTGHHHHRPPPPPPATTTPIT 192
>At3g10720.2 68416.m01291 pectinesterase, putative contains
similarity to pectinesterase from Vitis vinifera
GI:15081598, Prunus persica SP|Q43062; contains Pfam
profile PF01095 pectinesterase
Length = 619
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = -3
Query: 670 PSREPV--PVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPR 524
PS+ P PV P + PPS P PPS S SP P P+
Sbjct: 40 PSQLPFEPPVESPFFPPSQPPIFVPPSQPPSLPPSQSQSPSLACKSTPYPK 90
>At5g67460.1 68418.m08505 glycosyl hydrolase family protein 17
similar to beta-1,3-glucanase GI:6714534 from [Salix
gilgiana]
Length = 380
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -3
Query: 673 SPSREPVPVSGTRLRHKYP-LRYYP-PSSDP-RTPPSASGSPCGQHHPVPDPR 524
SPS E P+ + P + Y+P PS P + S PC +HP P P+
Sbjct: 230 SPSPETSPIHSSIGSPSPPTIPYFPEPSQSPMESNQGISLPPCLPYHPAPSPQ 282
>At4g35560.1 68417.m05053 expressed protein
Length = 917
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +1
Query: 34 SGKLVQIEYALAAVAAGGTSVGIKASNGVVI 126
S +++Q+EY + +A+ G+ V + SNG ++
Sbjct: 76 SNQVIQLEYTIPYLASNGSRVSVGYSNGDIL 106
>At1g70985.1 68414.m08189 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 135
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -3
Query: 658 PVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYTSFP 509
P+P++GT P YYP + PPS+S P ++P P P Y P
Sbjct: 36 PLPIAGTGSTQ--PAGYYPQPTGYYPPPSSSNVP---NYPSP-PYYGGNP 79
>At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic
isozyme 2 / transaminase A (ASP4) identical to aspartate
aminotransferase, cytoplasmic isozyme 2 SP:P46646
[Arabidopsis thaliana]
Length = 405
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +3
Query: 234 LSSARHTSQENGPTVLPDVPRADTHSAVGPASGDRHARIYSIRRRPSFRRFVTDLRLGER 413
LS+ + ++E P VL V RA+ A S D+ + P F + T L LG+
Sbjct: 34 LSAGTYRTEEGKPLVLDVVRRAEQQLA-NDLSRDKE--YLPLNGLPEFNKLSTKLILGDD 90
Query: 414 SPLL 425
SP L
Sbjct: 91 SPAL 94
>At3g47500.1 68416.m05166 Dof-type zinc finger domain-containing
protein identical to H-protein promoter binding
factor-2a GI:3386546 from [Arabidopsis thaliana]
Length = 448
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 622 YPLRYYPPSSDPRTPPSASGSPCGQ 548
YP+ +YP + P PP S SP Q
Sbjct: 314 YPMPFYPYWTIPMLPPHQSSSPISQ 338
>At2g36790.1 68415.m04512 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 495
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 574 KEGFEGQMTADNIEVGICDASGFRRLEPAHVKDY 675
KE E + AD G+ + F+ LEPA+ KD+
Sbjct: 207 KEILEDMVEADKTSYGVI-VNSFQELEPAYAKDF 239
>At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic
isozyme 2 / transaminase A (ASP4) identical to aspartate
aminotransferase, cytoplasmic isozyme 2 SP:P46646
[Arabidopsis thaliana]
Length = 403
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +3
Query: 234 LSSARHTSQENGPTVLPDVPRADTHSAVGPASGDRHARIYSIRRRPSFRRFVTDLRLGER 413
LS+ + ++E P VL V RA+ A D + P F + T L LG+
Sbjct: 34 LSAGTYRTEEGKPLVLDVVRRAEQQLA-----NDLDKEYLPLNGLPEFNKLSTKLILGDD 88
Query: 414 SPLL 425
SP L
Sbjct: 89 SPAL 92
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +3
Query: 186 NDYWPYRNGVLRHGP*LSSARHTSQENGPTVLPDVPRADTH-SAVGPASGDRHARI-YSI 359
+DY YRN GP A S E P L R D H PA+ +R A + + I
Sbjct: 698 DDYGEYRNSSCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEI 757
Query: 360 RRR 368
++R
Sbjct: 758 QKR 760
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = -3
Query: 652 PVSGTRLRHKYPLRYYPPS--SDPRTPPSASGSPCGQHHPVPDPRYTSFP 509
PV+ R P+ PP S P PP P H P P P Y+ P
Sbjct: 511 PVTKRRSPPPAPVNSPPPPVYSPPPPPPPVHSPPPPVHSPPPPPVYSPPP 560
>At4g24020.1 68417.m03452 RWP-RK domain-containing protein similar
to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 959
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 505 FLEKRYTEDLELDDAVHTAILTLKEGFEGQMTADNIEVG 621
FL T+D E D + + ++T+KE F+ A ++ G
Sbjct: 470 FLPSSITDDQEQDLLLGSILVTMKEHFQSLRVASGVDFG 508
>At4g23882.1 68417.m03434 heavy-metal-associated domain-containing
protein
Length = 284
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -3
Query: 619 PLRYYPPSSDP-RTPPSASGSPCGQHHPVPDPRYTSFP 509
P+ Y PPS P R PP +G+ Q P P Y P
Sbjct: 238 PIPYPPPSFFPGRPPPPYTGAGMFQSAPPQSPPYFPVP 275
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Frame = -3
Query: 667 SREPVPVSGTRLRHKYPLRYY----PPSSDPRTPPSASGSPCGQHHPVPDP 527
S +P P L P +Y PP + +PP S PC ++ P P P
Sbjct: 712 SPQPPPPPHYSLPPPTPTYHYISPPPPPTPIHSPPPQSHPPCIEYSPPPPP 762
>At4g14290.1 68417.m02202 expressed protein contains Interpro entry
IPR000379
Length = 534
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 252 TSQENGP--TVLPDVPRADTHSAVGPASGDRHARIYSIRRRPS 374
TS+ N T P++ +DT SA GP + AR+ S+ PS
Sbjct: 473 TSEGNAAASTTEPELALSDTDSASGPTPCNHDARLSSVASVPS 515
>At3g04370.1 68416.m00462 hypothetical protein contains Pfam profile
PF01657: Domain of unknown function
Length = 332
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 430 QCDPSGAYFAWKATAMGKNFNNGKTFL 510
QCDP A KAT N++N FL
Sbjct: 38 QCDPLDANILQKATTKSPNYSNQNLFL 64
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -3
Query: 628 HKYPLRYYPPSSDPRTPPSASGSPCGQHHPVP 533
H + + PP+S P T P +P H P P
Sbjct: 440 HHHVVHSPPPASSPPTSPPVHSTPSPVHKPQP 471
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -3
Query: 610 YYPPSSDPRTPPSASGSPCGQHHPVPDPRY 521
YYPP + PP P Q P P P Y
Sbjct: 696 YYPPVTQSPPPPPVYYLPVTQSPPPPSPVY 725
>At1g10620.1 68414.m01204 protein kinase family protein contains
serine/threonine protein kinases active-site signature,
PROSITE:PS00108
Length = 718
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = -3
Query: 658 PVPVSGTRLRHKYPLRYYPPSSDPRTPPSASGSPCGQHHPVPDPRYT 518
P P + + P PP + P +PP + P P P P+ T
Sbjct: 60 PPPATAAQPPPNQPPNTTPPPTPPSSPPPSITPPPSPPQPQPPPQST 106
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,792,690
Number of Sequences: 28952
Number of extensions: 367228
Number of successful extensions: 1503
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1461
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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