Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_C12
(361 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 109 1e-23
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 108 2e-23
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 102 2e-21
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 101 3e-21
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 97 1e-19
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 96 1e-19
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 91 4e-18
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 89 2e-17
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 88 4e-17
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 87 9e-17
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 85 5e-16
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 85 5e-16
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 82 3e-15
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 81 4e-15
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 79 3e-14
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 78 5e-14
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 77 1e-13
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 76 2e-13
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 75 4e-13
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 72 4e-12
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 71 8e-12
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 70 1e-11
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 68 6e-11
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 65 4e-10
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 63 1e-09
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 62 3e-09
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 60 2e-08
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 58 5e-08
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 58 6e-08
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 57 8e-08
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 52 3e-06
UniRef50_P19952 Cluster: 30S ribosomal protein S19e; n=5; Haloba... 46 2e-04
UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein ... 37 0.12
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 34 0.86
UniRef50_Q18US9 Cluster: Metal dependent phosphohydrolase; n=5; ... 33 1.1
UniRef50_A2QTP5 Cluster: Catalytic activity: Acylaminoacyl-pepti... 33 1.5
UniRef50_A3DE10 Cluster: Putative uncharacterized protein; n=1; ... 32 2.6
UniRef50_Q6CNX2 Cluster: Similar to sgd|S0002268 Saccharomyces c... 32 2.6
UniRef50_Q5C1K4 Cluster: SJCHGC05228 protein; n=1; Schistosoma j... 31 4.6
UniRef50_Q83AG5 Cluster: DNA ligase, ATP-dependent; n=4; Coxiell... 31 6.1
UniRef50_A0E988 Cluster: Chromosome undetermined scaffold_84, wh... 31 6.1
UniRef50_A0CYC0 Cluster: Chromosome undetermined scaffold_31, wh... 31 6.1
UniRef50_UPI000023D465 Cluster: hypothetical protein FG10402.1; ... 31 8.0
UniRef50_Q4QBV6 Cluster: DNA primase small subunit, putative; n=... 31 8.0
UniRef50_A2FEJ5 Cluster: Putative uncharacterized protein; n=1; ... 31 8.0
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 109 bits (263), Expect = 1e-23
Identities = 49/85 (57%), Positives = 64/85 (75%)
Frame = +2
Query: 107 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 286
M VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 287 LRHIYIRSPVGVKTVTKIFGGRKRN 361
RH+Y+R GV ++TKI+GGR+RN
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRN 85
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 108 bits (260), Expect = 2e-23
Identities = 47/81 (58%), Positives = 62/81 (76%)
Frame = +2
Query: 119 TVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 298
TVKDV + VK +AHLK+ GK+++P+ +D+VKTARFKEL PYDPDW+Y R A+I R I
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67
Query: 299 YIRSPVGVKTVTKIFGGRKRN 361
Y+R +GV KI+GGR+RN
Sbjct: 68 YLRQGIGVGGFQKIYGGRQRN 88
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 102 bits (244), Expect = 2e-21
Identities = 45/81 (55%), Positives = 57/81 (70%)
Frame = +2
Query: 107 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 286
M V+VKDV+ K + AA LK+ GK+ P +D+VKT KELAPYDPDW+YVR AAI
Sbjct: 1 MAGVSVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAI 60
Query: 287 LRHIYIRSPVGVKTVTKIFGG 349
RHIY+R VGV + K++GG
Sbjct: 61 ARHIYLRKQVGVGRLCKVYGG 81
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 101 bits (243), Expect = 3e-21
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = +2
Query: 107 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 286
M V+VKDV+ VK +A LKK GKV++PD D+VK + +LAPY+PDWFYVRCAAI
Sbjct: 1 MAPVSVKDVDGHVFVKALAQFLKKTGKVRLPDWTDVVKLSSANQLAPYNPDWFYVRCAAI 60
Query: 287 LRHIYIRSPVGVKTVTKIFGGRKRN 361
LRH+YIR P G+ + K F +KRN
Sbjct: 61 LRHLYIR-PTGLTGLCKAFSRKKRN 84
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 96.7 bits (230), Expect = 1e-19
Identities = 40/85 (47%), Positives = 61/85 (71%)
Frame = +2
Query: 104 MMRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAA 283
++R VTV+DV+ + +K A HLK+ GK+++P D+VKTA FKE +P DPDW+Y+R A+
Sbjct: 9 VVRGVTVRDVKPAEFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPDWYYIRAAS 68
Query: 284 ILRHIYIRSPVGVKTVTKIFGGRKR 358
I R +Y+R GV ++ K++GG R
Sbjct: 69 IARKVYLRQYTGVGSLKKVYGGAAR 93
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 96.3 bits (229), Expect = 1e-19
Identities = 41/80 (51%), Positives = 56/80 (70%)
Frame = +2
Query: 119 TVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 298
TVKDV + V T A+HLK++G +++P +D +KTA +ELAPYDPDW Y+R A+I R +
Sbjct: 12 TVKDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDPDWLYIRIASIARKL 71
Query: 299 YIRSPVGVKTVTKIFGGRKR 358
YIR +G KI+G RKR
Sbjct: 72 YIRGGIGTGEFRKIYGDRKR 91
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 91.5 bits (217), Expect = 4e-18
Identities = 40/76 (52%), Positives = 54/76 (71%)
Frame = +2
Query: 131 VEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 310
++Q +IV+ +A LKK GKVKVP+ DLVK KELAP D DW+YVR A++ R +YIRS
Sbjct: 10 IDQHEIVRQIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRS 69
Query: 311 PVGVKTVTKIFGGRKR 358
P GV + +++G KR
Sbjct: 70 PTGVGALRRVYGSNKR 85
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 89.0 bits (211), Expect = 2e-17
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 20/101 (19%)
Frame = +2
Query: 119 TVKDVEQDKIVKTVAAHLKKIGKV--------------------KVPDHMDLVKTARFKE 238
TVKDV + VK +AHLK+ GK+ ++P+ +D+VKTARFKE
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKLFVASQELLLLGNLRISFYQMELPEWVDIVKTARFKE 67
Query: 239 LAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRN 361
L PYDPDW+Y R A+I R IY+R +GV KI+GGR+RN
Sbjct: 68 LPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRN 108
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 88.2 bits (209), Expect = 4e-17
Identities = 38/87 (43%), Positives = 53/87 (60%)
Frame = +2
Query: 101 YMMRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCA 280
Y + ++KD D VK A H+K G ++ P +D KT+ KELAP DPDWFY+R A
Sbjct: 21 YRRLNTSLKDCNPDLFVKAFAEHMKLKGYLECPKRLDYAKTSVAKELAPQDPDWFYIRAA 80
Query: 281 AILRHIYIRSPVGVKTVTKIFGGRKRN 361
A+LRH+Y GV + K++ +KRN
Sbjct: 81 AVLRHLYFHPDSGVDRLRKVYSSKKRN 107
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 87.0 bits (206), Expect = 9e-17
Identities = 38/83 (45%), Positives = 54/83 (65%)
Frame = +2
Query: 113 SVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILR 292
+VT+KDV + + T A LKK G+V++P D+ KTA ++EL P +PDW Y R A + R
Sbjct: 5 AVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLAR 64
Query: 293 HIYIRSPVGVKTVTKIFGGRKRN 361
+YIR GV T ++FGG +RN
Sbjct: 65 KVYIRGGDGVATYRRVFGGNRRN 87
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 84.6 bits (200), Expect = 5e-16
Identities = 38/81 (46%), Positives = 55/81 (67%)
Frame = +2
Query: 119 TVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 298
T KDV +++ A LKK GK+ +P+ +D VKTA KEL P + DW Y+R A+ILRH+
Sbjct: 18 TAKDVPAGILIEKFAQQLKKGGKMTMPEWVDHVKTASSKELPPQNSDWLYIRAASILRHL 77
Query: 299 YIRSPVGVKTVTKIFGGRKRN 361
Y+R VGV ++K +G ++RN
Sbjct: 78 YVRPNVGVGALSKFYGRKQRN 98
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 84.6 bits (200), Expect = 5e-16
Identities = 36/82 (43%), Positives = 57/82 (69%)
Frame = +2
Query: 110 RSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAIL 289
+ T+KDV + +KT A H K+ GK+ VP+ +++K++ +E AP +PDW+Y+RCAA+L
Sbjct: 27 KGATLKDVSAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNPDWYYIRCAAVL 86
Query: 290 RHIYIRSPVGVKTVTKIFGGRK 355
R IY+R VG ++K FG +K
Sbjct: 87 RAIYLRPGVGYGGLSKRFGNKK 108
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 81.8 bits (193), Expect = 3e-15
Identities = 34/75 (45%), Positives = 50/75 (66%)
Frame = +2
Query: 122 VKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 301
+KDV +K A HLKK GK+++P+ +D VKT KELAP +PDW Y+R AAI R +Y
Sbjct: 7 IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVY 66
Query: 302 IRSPVGVKTVTKIFG 346
+ + +GV + + +G
Sbjct: 67 LNNGIGVMALRRAYG 81
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 81.4 bits (192), Expect = 4e-15
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = +2
Query: 119 TVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 298
TV DV D ++ VA LK KVK P+ ++ VKT KE P +PDW+YVR AA+LR +
Sbjct: 3 TVYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRV 62
Query: 299 YIRSPVGVKTVTKIFGGRK 355
YI PVGV ++ +GG+K
Sbjct: 63 YIDGPVGVNSLRTHYGGKK 81
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 78.6 bits (185), Expect = 3e-14
Identities = 37/79 (46%), Positives = 50/79 (63%)
Frame = +2
Query: 119 TVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 298
TV DV D +V+ VA LK+I ++K P+ VKT R KE P DW+Y R A+ILR +
Sbjct: 3 TVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRV 62
Query: 299 YIRSPVGVKTVTKIFGGRK 355
YI PVG++ + +GGRK
Sbjct: 63 YIDGPVGIERLRTYYGGRK 81
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 77.8 bits (183), Expect = 5e-14
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Frame = +2
Query: 5 RQGAYFGEATWFLIKYKCXXXXXXXXXXXXKVYMMRSVTVKDVE---QDKIVKTVAAHLK 175
R G Y + W L K K + +++ ++DVE K + +A LK
Sbjct: 40 RGGIYLIDGIWMLRKGHSWISSLSPVRAYGKSH--QNLQIEDVEILTAQKFIAAYSAFLK 97
Query: 176 KIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRK 355
+ GK+ +P +D VKT+ EL P D DW+YVR AA+ RHIY+R VGV + K+ G K
Sbjct: 98 RQGKLPIPGWVDTVKTSCSNELPPQDSDWYYVRAAAVARHIYMRKTVGVGRLRKVHGSTK 157
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 76.6 bits (180), Expect = 1e-13
Identities = 36/81 (44%), Positives = 48/81 (59%)
Frame = +2
Query: 119 TVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 298
TVKDV ++ A +LKK K+K+P+ +VKT KE +P D DW YVR AA+ R I
Sbjct: 57 TVKDVPAQDFIRGYAEYLKKNNKIKIPEWASIVKTGLGKETSPIDQDWMYVRAAALARKI 116
Query: 299 YIRSPVGVKTVTKIFGGRKRN 361
Y+R GV +T +FG N
Sbjct: 117 YVRGHWGVGNLTHMFGSVNDN 137
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 75.8 bits (178), Expect = 2e-13
Identities = 33/79 (41%), Positives = 48/79 (60%)
Frame = +2
Query: 119 TVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 298
TV DV D +++ VA LKK ++K P KT KE+ P DPDW++ R AA+LR +
Sbjct: 3 TVYDVPADHLIRKVAEELKKRQEIKPPAWAAFAKTGVHKEMPPEDPDWWFTRAAAVLRRV 62
Query: 299 YIRSPVGVKTVTKIFGGRK 355
Y+ P+GV+ + +GG K
Sbjct: 63 YVDGPLGVERMRSFYGGSK 81
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 74.9 bits (176), Expect = 4e-13
Identities = 32/79 (40%), Positives = 47/79 (59%)
Frame = +2
Query: 119 TVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 298
TVKDV ++ A+HLKK K+ +P+ T+ +ELAP D DW Y+R AA+ R +
Sbjct: 9 TVKDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARKV 68
Query: 299 YIRSPVGVKTVTKIFGGRK 355
Y++ G+ T+ IFG K
Sbjct: 69 YLKPHTGISTLKHIFGSNK 87
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 71.7 bits (168), Expect = 4e-12
Identities = 32/75 (42%), Positives = 47/75 (62%)
Frame = +2
Query: 131 VEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 310
V ++V+ +A LK ++K P+ VKT R KE P DPDW+Y+R A+ILR +Y+
Sbjct: 7 VPGSELVERLAEKLKDFEEIKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILRRVYMDG 66
Query: 311 PVGVKTVTKIFGGRK 355
PVGV + +GGR+
Sbjct: 67 PVGVSRLRTYYGGRQ 81
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 70.5 bits (165), Expect = 8e-12
Identities = 31/86 (36%), Positives = 48/86 (55%)
Frame = +2
Query: 101 YMMRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCA 280
Y + ++ D + D + A ++ + P +D VKT+ KELAP DP WFY+R A
Sbjct: 21 YRRFNTSLNDCQPDVFIAAFAQQMELKNYIDPPKWIDYVKTSCAKELAPQDPKWFYIRSA 80
Query: 281 AILRHIYIRSPVGVKTVTKIFGGRKR 358
AILRH+Y G+ + +++ RKR
Sbjct: 81 AILRHLYFHPDEGIGRLRRVYASRKR 106
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 70.1 bits (164), Expect = 1e-11
Identities = 35/80 (43%), Positives = 48/80 (60%)
Frame = +2
Query: 119 TVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 298
TV DV D ++K VA LK + V P+ VKT KE +P DW+Y+R A+I R +
Sbjct: 3 TVYDVPADLLIKRVAERLKDM--VAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRV 60
Query: 299 YIRSPVGVKTVTKIFGGRKR 358
YI PVG++ + +GGRKR
Sbjct: 61 YIDGPVGIERLRTFYGGRKR 80
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 67.7 bits (158), Expect = 6e-11
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = +2
Query: 137 QDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRH 295
Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPY+ +WFY R A+ RH
Sbjct: 156 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYEENWFYTRAASTARH 208
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 64.9 bits (151), Expect = 4e-10
Identities = 30/79 (37%), Positives = 47/79 (59%)
Frame = +2
Query: 116 VTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRH 295
V+VK V D ++ V+ LK+ K+K P+ + VKT KE P DW YVR A++LR
Sbjct: 2 VSVKYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRK 61
Query: 296 IYIRSPVGVKTVTKIFGGR 352
+YI +G+ ++ +GG+
Sbjct: 62 LYINGYLGISRMSSEYGGK 80
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 63.3 bits (147), Expect = 1e-09
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +2
Query: 122 VKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 301
+KDV+ + + A +LK K+ P + VKT + ++LAP D DW++++ ++ILR +Y
Sbjct: 50 IKDVDAELFISAYAKYLKLHNKITFPKWCNFVKTGKGRKLAPLDEDWYFIKTSSILRRLY 109
Query: 302 IRSPVGVKTVTKIFGGRKR 358
I +GV + + F ++R
Sbjct: 110 IHPDIGVGFLRRQFSYKQR 128
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 62.1 bits (144), Expect = 3e-09
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +2
Query: 116 VTVKDVEQDKIVKTVAAHLK-KIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILR 292
V +V D +++ VA LK K +VK P KT KE P D DW+YVR A+ILR
Sbjct: 2 VNALEVPADLLIRRVARKLKEKYPQVKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILR 61
Query: 293 HIY-IRSPVGVKTVTKIFGGRK 355
+Y P+G++T I+GGR+
Sbjct: 62 KLYKSPEPIGIETFRTIYGGRQ 83
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 59.7 bits (138), Expect = 2e-08
Identities = 28/81 (34%), Positives = 49/81 (60%)
Frame = +2
Query: 116 VTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRH 295
VT+ DV D +++ VAA L+ ++ PD ++ K+ KEL P D++YVR A++LR
Sbjct: 14 VTIYDVPGDALIEEVAARLED--RIDEPDWVEFAKSGAGKELPPEQEDFWYVRSASLLRK 71
Query: 296 IYIRSPVGVKTVTKIFGGRKR 358
+ P+G++ + +G +KR
Sbjct: 72 VAQNEPIGIERLATEYGSKKR 92
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 58.0 bits (134), Expect = 5e-08
Identities = 27/78 (34%), Positives = 43/78 (55%)
Frame = +2
Query: 122 VKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 301
V DV D ++ +A LK + P + VKT + P + DW++ RCA+I+R IY
Sbjct: 4 VYDVPADVLIGKLAEILKN-EDIPAPSWIPFVKTGAHADKPPQNRDWWHTRCASIMRKIY 62
Query: 302 IRSPVGVKTVTKIFGGRK 355
+ P+G+ + K +GG K
Sbjct: 63 LHGPIGINELRKDYGGGK 80
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 57.6 bits (133), Expect = 6e-08
Identities = 24/78 (30%), Positives = 44/78 (56%)
Frame = +2
Query: 125 KDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 304
+++ D +V +A H + ++ P+ DLVKTA K+LAP + +W+Y+R AA+ R IY+
Sbjct: 14 REIAADVLVNALAKHYQDTQVIRNPEWADLVKTASLKQLAPANNNWWYIRAAAVTRQIYL 73
Query: 305 RSPVGVKTVTKIFGGRKR 358
+ + +G +
Sbjct: 74 HHDASLSGLAFHYGANMK 91
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 57.2 bits (132), Expect = 8e-08
Identities = 21/79 (26%), Positives = 47/79 (59%)
Frame = +2
Query: 122 VKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 301
+KD+ +D + A L+K G++ +P +++ K++ K+ +P +W + R A+I+ Y
Sbjct: 5 LKDIPKDVFINYYAEFLEKSGQINIPSWIEICKSSSLKKYSPNQSNWIFKRMASIIIKFY 64
Query: 302 IRSPVGVKTVTKIFGGRKR 358
I +G + + +I+ G+K+
Sbjct: 65 IYKKLGTRQLVRIYNGKKK 83
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 52.0 bits (119), Expect = 3e-06
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +2
Query: 140 DKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPVG 319
D ++ +A LKK ++ PD + VKT + P D W++ RCA+++R IY+ P+G
Sbjct: 4 DVLIGRLAEILKK-EELPRPDWVPFVKTGVHADKPPQDRAWWHTRCASLMRKIYLHGPIG 62
Query: 320 VKTVTKIFGGRK 355
+ + +GG K
Sbjct: 63 INGLRSEYGGGK 74
>UniRef50_P19952 Cluster: 30S ribosomal protein S19e; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S19e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 153
Score = 46.4 bits (105), Expect = 2e-04
Identities = 22/80 (27%), Positives = 42/80 (52%)
Frame = +2
Query: 119 TVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 298
T+ DV +++++ + L ++ PD + KT +EL P D++ R A++LR +
Sbjct: 3 TLYDVPPEELIEALTETLADEDDIEAPDWAEFTKTGVDRELPPEQEDFWTRRAASLLRKV 62
Query: 299 YIRSPVGVKTVTKIFGGRKR 358
+ PVGV + +G K+
Sbjct: 63 AVDGPVGVNALRSEYGTSKQ 82
>UniRef50_UPI0000E22B1D Cluster: PREDICTED: hypothetical protein
isoform 1; n=2; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 1 - Pan troglodytes
Length = 180
Score = 36.7 bits (81), Expect = 0.12
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = -1
Query: 322 NSNRRADIDVTQYSSTAYIKPIRVIGSQFLETSCLYQVHMIWNLHFADLFQVSGYSFDDF 143
N + ++ V + S++ ++P+ ++GS+ L VH + LF+ S D+
Sbjct: 86 NPSATPEVQVPRCGSSSRVEPVLIVGSKLFVLGQLDGVHPFGDFQLPGLFEEGCQSSDEL 145
Query: 142 VLFNILHCNGTH 107
+L ++ + N H
Sbjct: 146 LLVHVFYSNSRH 157
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 33.9 bits (74), Expect = 0.86
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 229 TSCLYQVHMIWNLHFADLFQVSGYSFDDFVLFNILHCNGTHHVYFL 92
T Y ++W L F LF V G ++ +F LF +C+ +H+ L
Sbjct: 33 TQINYTPSLLWALGFVFLFTVGGPNWSNFSLFINWYCSSRYHIMLL 78
>UniRef50_Q18US9 Cluster: Metal dependent phosphohydrolase; n=5;
Clostridia|Rep: Metal dependent phosphohydrolase -
Desulfitobacterium hafniense (strain DCB-2)
Length = 220
Score = 33.5 bits (73), Expect = 1.1
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +2
Query: 110 RSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHM 208
+S+ + VE+D+I +AAHL IGK+ +PDH+
Sbjct: 49 KSLKLSIVERDRI--HIAAHLHDIGKIGIPDHI 79
>UniRef50_A2QTP5 Cluster: Catalytic activity: Acylaminoacyl-peptide
+ H(2)O = acylamino acid + peptide; n=1; Aspergillus
niger|Rep: Catalytic activity: Acylaminoacyl-peptide +
H(2)O = acylamino acid + peptide - Aspergillus niger
Length = 750
Score = 33.1 bits (72), Expect = 1.5
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2
Query: 170 LKKIGKVKVPDHMDLVKTARFKELAPYDP 256
L + K+KVPDH D+V T RF AP DP
Sbjct: 256 LPALKKIKVPDHADIVATPRF---APRDP 281
>UniRef50_A3DE10 Cluster: Putative uncharacterized protein; n=1;
Clostridium thermocellum ATCC 27405|Rep: Putative
uncharacterized protein - Clostridium thermocellum
(strain ATCC 27405 / DSM 1237)
Length = 136
Score = 32.3 bits (70), Expect = 2.6
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 207 WTW*RQLVSRNWLPMTLIGFMYAVLLYCVTSI 302
W + + S+ WL ++GF+Y ++LY V+SI
Sbjct: 71 WISTKNVKSKGWLNGAIVGFIYMLILYLVSSI 102
>UniRef50_Q6CNX2 Cluster: Similar to sgd|S0002268 Saccharomyces
cerevisiae YDL110c hypothetical protein; n=1;
Kluyveromyces lactis|Rep: Similar to sgd|S0002268
Saccharomyces cerevisiae YDL110c hypothetical protein -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 160
Score = 32.3 bits (70), Expect = 2.6
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 85 VDLESIHDAFRYSEGC*TRQNRQNCSRSLEKDRQSEGSRSYGLGKDSSFQGTGS 246
+DLE H A S G + Q+ S L++ QS+G R+ G+ D++ TGS
Sbjct: 107 LDLEEQHRASTVSSG-----DIQSASTKLKRSLQSQGRRTVGVDSDNTADATGS 155
>UniRef50_Q5C1K4 Cluster: SJCHGC05228 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05228 protein - Schistosoma
japonicum (Blood fluke)
Length = 251
Score = 31.5 bits (68), Expect = 4.6
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = -1
Query: 235 LETSCLYQVHMIWNLHFADLFQVSGYSFDDFVLFNILHCNGTHHVY 98
L+ C++ +H+++N+H DL + Y+ + ++ H +H VY
Sbjct: 74 LQRMCIHNLHVVYNVHRKDLIRFWQYAV--VLSISLSHTENSHQVY 117
>UniRef50_Q83AG5 Cluster: DNA ligase, ATP-dependent; n=4; Coxiella
burnetii|Rep: DNA ligase, ATP-dependent - Coxiella
burnetii
Length = 781
Score = 31.1 bits (67), Expect = 6.1
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = +2
Query: 35 WFLIKYKCXXXXXXXXXXXXKVYMMRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDL 214
W LIK K + ++ ++++++ K+ +++ LK K VP+ +
Sbjct: 118 WLLIKKKDHYATERFDIDNYPLSVISGASIEEIKNHKLALSLS-DLKNAKKTVVPEFIQ- 175
Query: 215 VKTARFKELAPYDPDWFY 268
+ A+ K + P PDW +
Sbjct: 176 PQLAKLKTVVPDSPDWIH 193
>UniRef50_A0E988 Cluster: Chromosome undetermined scaffold_84, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_84,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1783
Score = 31.1 bits (67), Expect = 6.1
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -1
Query: 205 MIWNLHFADLFQVSGYSFDDFVLFNILHCNGTHHVYFLN 89
+IWN+ F D ++ GY F + FNI++ GT V++L+
Sbjct: 200 VIWNIIFYD-DKLVGYQFGFMIFFNIINNIGTLLVWYLS 237
>UniRef50_A0CYC0 Cluster: Chromosome undetermined scaffold_31, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_31,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1437
Score = 31.1 bits (67), Expect = 6.1
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 137 QDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWF 265
Q ++ +A LK+I + + DH D+ +T KE+ D D+F
Sbjct: 838 QRRMKPNIADFLKRIYQQNIKDHQDIHETTNKKEVKGLDSDFF 880
>UniRef50_UPI000023D465 Cluster: hypothetical protein FG10402.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG10402.1 - Gibberella zeae PH-1
Length = 1187
Score = 30.7 bits (66), Expect = 8.0
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 317 QQESGYRCDAV*QHSVHKTNQGHREPVP*NELSLPSPYDLEP 192
++E Y +HS+H + GHREP P N L P D +P
Sbjct: 438 RRERAYSGSDSGRHSIHPGDYGHREP-PRNPLPYGRPPDRDP 478
>UniRef50_Q4QBV6 Cluster: DNA primase small subunit, putative; n=6;
Trypanosomatidae|Rep: DNA primase small subunit,
putative - Leishmania major
Length = 451
Score = 30.7 bits (66), Expect = 8.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 260 WFYVRCAAILRHIYIRSPVGVKTVTKIFGGRK 355
W ++ CAA + H +R G K + +F GR+
Sbjct: 190 WAWMSCAAHVLHTVLRDDFGFKYILPVFSGRR 221
>UniRef50_A2FEJ5 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 434
Score = 30.7 bits (66), Expect = 8.0
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Frame = -1
Query: 361 IAFATTKNFSDSL--NSNRRADIDVTQYSSTAYIKPIRVIGSQFLETSCLYQVHMIWNLH 188
+ + T+ +F + N ++ D + + + V G + L T CL + I
Sbjct: 5 VDYVTSTSFMNLFMNNDSKTLDFVIAHFDQIMQLGFRTVNGKKNLVTPCLQIIRNIRYPF 64
Query: 187 FADLFQVSGYSFDDFVLFNILHC----NGTHHVYFL 92
D++Q + + F+ +HC N +HH+YFL
Sbjct: 65 LTDVYQKTNLA--SFLTNYPIHCRAFSNASHHIYFL 98
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,187,483
Number of Sequences: 1657284
Number of extensions: 6078207
Number of successful extensions: 14706
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 14456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14700
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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