Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_C12
         (361 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein pro...   109   2e-24
BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19 p...   109   2e-24
BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19 p...   109   2e-24
BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19 p...   109   2e-24
AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19 p...   109   2e-24
BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19 p...   108   4e-24
BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.        29   3.3  
AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.                29   3.3  
AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.     29   3.3  

>M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein
           protein.
          Length = 145

 Score =  109 bits (263), Expect = 2e-24
 Identities = 49/85 (57%), Positives = 64/85 (75%)
 Frame = +2

Query: 107 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 286
           M  VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+ 
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60

Query: 287 LRHIYIRSPVGVKTVTKIFGGRKRN 361
            RH+Y+R   GV ++TKI+GGR+RN
Sbjct: 61  ARHLYLRGGAGVGSMTKIYGGRQRN 85


>BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  109 bits (263), Expect = 2e-24
 Identities = 49/85 (57%), Positives = 64/85 (75%)
 Frame = +2

Query: 107 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 286
           M  VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+ 
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60

Query: 287 LRHIYIRSPVGVKTVTKIFGGRKRN 361
            RH+Y+R   GV ++TKI+GGR+RN
Sbjct: 61  ARHLYLRGGAGVGSMTKIYGGRQRN 85


>BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  109 bits (263), Expect = 2e-24
 Identities = 49/85 (57%), Positives = 64/85 (75%)
 Frame = +2

Query: 107 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 286
           M  VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+ 
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60

Query: 287 LRHIYIRSPVGVKTVTKIFGGRKRN 361
            RH+Y+R   GV ++TKI+GGR+RN
Sbjct: 61  ARHLYLRGGAGVGSMTKIYGGRQRN 85


>BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  109 bits (263), Expect = 2e-24
 Identities = 49/85 (57%), Positives = 64/85 (75%)
 Frame = +2

Query: 107 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 286
           M  VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+ 
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60

Query: 287 LRHIYIRSPVGVKTVTKIFGGRKRN 361
            RH+Y+R   GV ++TKI+GGR+RN
Sbjct: 61  ARHLYLRGGAGVGSMTKIYGGRQRN 85


>AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score =  109 bits (263), Expect = 2e-24
 Identities = 49/85 (57%), Positives = 64/85 (75%)
 Frame = +2

Query: 107 MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 286
           M  VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+ 
Sbjct: 1   MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60

Query: 287 LRHIYIRSPVGVKTVTKIFGGRKRN 361
            RH+Y+R   GV ++TKI+GGR+RN
Sbjct: 61  ARHLYLRGGAGVGSMTKIYGGRQRN 85


>BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19
           protein.
          Length = 157

 Score =  108 bits (260), Expect = 4e-24
 Identities = 48/82 (58%), Positives = 63/82 (76%)
 Frame = +2

Query: 116 VTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAILRH 295
           VTVKDV Q + V+ +AA LKK GK+KVP+ +D VK A+ KELAPYD +WFY R A+  RH
Sbjct: 16  VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 75

Query: 296 IYIRSPVGVKTVTKIFGGRKRN 361
           +Y+R   GV ++TKI+GGR+RN
Sbjct: 76  LYLRGGAGVGSMTKIYGGRQRN 97


>BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.
          Length = 1481

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = +1

Query: 163  RSLEKDRQSEGSRSYGLGKDSSFQGTGS 246
            ++L K+R   GS S+ LG+ SS+QGTGS
Sbjct: 1359 QTLVKNRTFSGSLSH-LGESSSYQGTGS 1385


>AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.
          Length = 1490

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = +1

Query: 163  RSLEKDRQSEGSRSYGLGKDSSFQGTGS 246
            ++L K+R   GS S+ LG+ SS+QGTGS
Sbjct: 1368 QTLVKNRTFSGSLSH-LGESSSYQGTGS 1394


>AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.
          Length = 1535

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = +1

Query: 163  RSLEKDRQSEGSRSYGLGKDSSFQGTGS 246
            ++L K+R   GS S+ LG+ SS+QGTGS
Sbjct: 1413 QTLVKNRTFSGSLSH-LGESSSYQGTGS 1439


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,446,227
Number of Sequences: 237096
Number of extensions: 972075
Number of successful extensions: 1924
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1924
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)