Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_C11
         (410 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.2  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    20   8.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   8.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   8.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   8.2  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
 Frame = -1

Query: 218 TRPHSYPKPSLQRP---LSPHIT 159
           TRP  YP P+ Q P   LSP ++
Sbjct: 160 TRPPMYPFPAGQYPYPILSPEMS 182


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
 Frame = -1

Query: 218 TRPHSYPKPSLQRP---LSPHIT 159
           TRP  YP P+ Q P   LSP ++
Sbjct: 52  TRPPMYPFPAGQYPYPILSPEMS 74


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 222 SKKRWTDCVKDY 257
           +KKRW+ C+  Y
Sbjct: 119 AKKRWSQCMYMY 130


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 222 SKKRWTDCVKDY 257
           +KKRW+ C+  Y
Sbjct: 433 AKKRWSQCMYMY 444


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 222 SKKRWTDCVKDY 257
           +KKRW+ C+  Y
Sbjct: 666 AKKRWSQCMYMY 677



 Score = 20.2 bits (40), Expect = 8.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 101  PIAKSNMFLTKTTCDGNILTLVHDAEF 21
            P+A S++F      +  I  L+H  EF
Sbjct: 973  PLAPSSLFFFCMAAEFIIAALLHPQEF 999


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 222 SKKRWTDCVKDY 257
           +KKRW+ C+  Y
Sbjct: 666 AKKRWSQCMYMY 677



 Score = 20.2 bits (40), Expect = 8.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 101  PIAKSNMFLTKTTCDGNILTLVHDAEF 21
            P+A S++F      +  I  L+H  EF
Sbjct: 973  PLAPSSLFFFCMAAEFIIAALLHPQEF 999


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,047
Number of Sequences: 336
Number of extensions: 2145
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)