Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_C11
         (410 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0273 - 7036125-7037999                                           27   5.8  
09_02_0311 + 7164774-7166327                                           27   7.7  

>03_02_0273 - 7036125-7037999
          Length = 624

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 269 LEHEGKCIYALALPIALVRPESPNAISKRARR 364
           +EH+G CI A+ +   L   E+    + RARR
Sbjct: 1   MEHKGLCILAVVIAFQLAGGEAVTDATARARR 32


>09_02_0311 + 7164774-7166327
          Length = 517

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 314 ALVRPESPNAISKRARRDELR 376
           AL  PE+PN++ +R RR E R
Sbjct: 219 ALFLPETPNSLLERGRRGEAR 239


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,565,309
Number of Sequences: 37544
Number of extensions: 226895
Number of successful extensions: 424
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)