Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_C11
         (410 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128134-1|BAC87289.1|  377|Homo sapiens member 6 (SLC12A6).  pr...    29   4.5  

>AK128134-1|BAC87289.1|  377|Homo sapiens member 6 (SLC12A6).
           protein.
          Length = 377

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
 Frame = -1

Query: 248 HTVRPSFL*YTRPHSYPKPSLQRPLSP---HIT--SHVRI 144
           HT+RP++  +TR H     +L RPL+P   H+T  SH  +
Sbjct: 168 HTLRPTYCPHTRSHPMHLLTLIRPLTPAHTHLTPGSHTHV 207


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,555,848
Number of Sequences: 237096
Number of extensions: 1308321
Number of successful extensions: 5833
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5833
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)