Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_C09
(368 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical pr... 29 1.0
AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPas... 29 1.0
U23514-6|AAC46544.2| 816|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z92833-8|CAI70417.1| 719|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z92833-7|CAB07381.1| 825|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z92833-6|CAB07380.1| 823|Caenorhabditis elegans Hypothetical pr... 27 4.2
AL023842-10|CAI70400.1| 719|Caenorhabditis elegans Hypothetical... 27 4.2
AL023842-9|CAA19521.1| 825|Caenorhabditis elegans Hypothetical ... 27 4.2
AL023842-8|CAA19520.1| 823|Caenorhabditis elegans Hypothetical ... 27 4.2
AL023842-1|CAD54167.1| 503|Caenorhabditis elegans Hypothetical ... 27 4.2
AF364604-1|AAK62778.1| 719|Caenorhabditis elegans hypoxia-induc... 27 4.2
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 27 4.2
Z81076-10|CAB03059.1| 394|Caenorhabditis elegans Hypothetical p... 26 7.3
U23171-1|AAC46702.2| 334|Caenorhabditis elegans Serpentine rece... 26 7.3
>Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical
protein K11D9.2b protein.
Length = 1004
Score = 29.1 bits (62), Expect = 1.0
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 230 FMRHLLPTT-GERVVVSLGWIIGMIESTTPVQCLWYNSV 117
F+R+L+ + GE V + + +G+ E+ PVQ LW N V
Sbjct: 761 FIRYLISSNVGEVVSIFMVAALGIPEALIPVQLLWVNLV 799
>Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical
protein K11D9.2a protein.
Length = 1059
Score = 29.1 bits (62), Expect = 1.0
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 230 FMRHLLPTT-GERVVVSLGWIIGMIESTTPVQCLWYNSV 117
F+R+L+ + GE V + + +G+ E+ PVQ LW N V
Sbjct: 761 FIRYLISSNVGEVVSIFMVAALGIPEALIPVQLLWVNLV 799
>AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPase
protein.
Length = 1059
Score = 29.1 bits (62), Expect = 1.0
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 230 FMRHLLPTT-GERVVVSLGWIIGMIESTTPVQCLWYNSV 117
F+R+L+ + GE V + + +G+ E+ PVQ LW N V
Sbjct: 761 FIRYLISSNVGEVVSIFMVAALGIPEALIPVQLLWVNLV 799
>U23514-6|AAC46544.2| 816|Caenorhabditis elegans Hypothetical
protein F48E8.4 protein.
Length = 816
Score = 27.5 bits (58), Expect = 3.2
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 79 CLEPGFFSHINGPTELYHKHWTGVVDSIIPIIHPSDTTTLSPVVGSKCLIKISDFKTRRN 258
C P +F H++ P+E + + D I + D + + ++ ++KI DF RN
Sbjct: 590 CRRPNYF-HVHPPSEEHLEPSDTTEDFIFHMNLARDMSRFARLMTEVFVVKIQDFTKWRN 648
Query: 259 D 261
D
Sbjct: 649 D 649
>Z92833-8|CAI70417.1| 719|Caenorhabditis elegans Hypothetical
protein F38A6.3e protein.
Length = 719
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 166 PIIHPSDT--TTLSPVVGSKCLIKISDFKTRRN 258
P+I P D T + PVVG + +K +D R+N
Sbjct: 386 PLIEPEDPFDTVIEPVVGGEEPVKQADMGARKN 418
>Z92833-7|CAB07381.1| 825|Caenorhabditis elegans Hypothetical
protein F38A6.3b protein.
Length = 825
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 166 PIIHPSDT--TTLSPVVGSKCLIKISDFKTRRN 258
P+I P D T + PVVG + +K +D R+N
Sbjct: 490 PLIEPEDPFDTVIEPVVGGEEPVKQADMGARKN 522
>Z92833-6|CAB07380.1| 823|Caenorhabditis elegans Hypothetical
protein F38A6.3a protein.
Length = 823
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 166 PIIHPSDT--TTLSPVVGSKCLIKISDFKTRRN 258
P+I P D T + PVVG + +K +D R+N
Sbjct: 490 PLIEPEDPFDTVIEPVVGGEEPVKQADMGARKN 522
>AL023842-10|CAI70400.1| 719|Caenorhabditis elegans Hypothetical
protein F38A6.3e protein.
Length = 719
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 166 PIIHPSDT--TTLSPVVGSKCLIKISDFKTRRN 258
P+I P D T + PVVG + +K +D R+N
Sbjct: 386 PLIEPEDPFDTVIEPVVGGEEPVKQADMGARKN 418
>AL023842-9|CAA19521.1| 825|Caenorhabditis elegans Hypothetical
protein F38A6.3b protein.
Length = 825
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 166 PIIHPSDT--TTLSPVVGSKCLIKISDFKTRRN 258
P+I P D T + PVVG + +K +D R+N
Sbjct: 490 PLIEPEDPFDTVIEPVVGGEEPVKQADMGARKN 522
>AL023842-8|CAA19520.1| 823|Caenorhabditis elegans Hypothetical
protein F38A6.3a protein.
Length = 823
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 166 PIIHPSDT--TTLSPVVGSKCLIKISDFKTRRN 258
P+I P D T + PVVG + +K +D R+N
Sbjct: 490 PLIEPEDPFDTVIEPVVGGEEPVKQADMGARKN 522
>AL023842-1|CAD54167.1| 503|Caenorhabditis elegans Hypothetical
protein F38A6.3c protein.
Length = 503
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 166 PIIHPSDT--TTLSPVVGSKCLIKISDFKTRRN 258
P+I P D T + PVVG + +K +D R+N
Sbjct: 170 PLIEPEDPFDTVIEPVVGGEEPVKQADMGARKN 202
>AF364604-1|AAK62778.1| 719|Caenorhabditis elegans hypoxia-induced
factor 1 protein.
Length = 719
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 166 PIIHPSDT--TTLSPVVGSKCLIKISDFKTRRN 258
P+I P D T + PVVG + +K +D R+N
Sbjct: 386 PLIEPEDPFDTVIEPVVGGEEPVKQADMGARKN 418
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 89 PDFSLTSTVLRNYTISTGPASSIQSSQLSTQAIRQPS 199
P S T N TIS GP +S S+ S+ + QPS
Sbjct: 28 PASSQTHVGYDNATISAGPTTSESSAATSSAQVIQPS 64
>Z81076-10|CAB03059.1| 394|Caenorhabditis elegans Hypothetical
protein F35C5.9 protein.
Length = 394
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 6 SCFSRVWMCRTVVVDNSVHRTDYHVFGT 89
S SR+W+ VVDNS + Y+V+ T
Sbjct: 48 SDLSRLWLDIVFVVDNSKNMNLYNVYNT 75
>U23171-1|AAC46702.2| 334|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 55 protein.
Length = 334
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = +1
Query: 16 LAYGCAEQSWWTIVCIGRITTCLEPGFFSHINGPTELYHKHWTGVVDSIIPIIHP 180
LAYG A Q++ ++C + +C FS + L ++H G++ + P
Sbjct: 237 LAYGLACQTFLPVICYIPVASCY---IFSQMTSVELLLNEHLLGILICFPSFVDP 288
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,147,063
Number of Sequences: 27780
Number of extensions: 163304
Number of successful extensions: 443
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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