Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_C06
(451 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical pr... 29 1.6
U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical pr... 28 2.7
U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical pr... 28 2.7
AF016444-7|AAB65924.1| 204|Caenorhabditis elegans Hypothetical ... 28 2.7
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 28 3.6
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 28 3.6
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 28 3.6
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 28 3.6
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 28 3.6
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 28 3.6
AF068708-2|AAC17753.1| 464|Caenorhabditis elegans Hypothetical ... 28 3.6
Z81492-2|CAB04027.1| 458|Caenorhabditis elegans Hypothetical pr... 27 8.3
AF390558-1|AAK72007.1| 308|Caenorhabditis elegans ced-3 proteas... 27 8.3
AF003740-4|AAL08030.1| 308|Caenorhabditis elegans Ced-3 proteas... 27 8.3
>Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical
protein K09C8.4 protein.
Length = 633
Score = 29.1 bits (62), Expect = 1.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 76 NAQKTYEKWKT*THFYK*LHTLK 8
NA K+ ++W+ H+ K LHTLK
Sbjct: 595 NASKSLKRWRRDPHYQKCLHTLK 617
>Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical
protein B0393.5 protein.
Length = 1106
Score = 29.1 bits (62), Expect = 1.6
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
Frame = +2
Query: 179 ETDCPAGTHITAKGL-CPSQQHRGVECCHSVLRKINTCRSHGGECMD-------RCPENL 334
E +C AG A+G C + VE CH NT S+ EC D C E +
Sbjct: 512 ECECLAGFERIAEGAHCTDRDECAVEPCHPAAICSNTRGSYKCECRDGFVGDGKTCHETI 571
Query: 335 TYKNADDCNI 364
Y ++D +
Sbjct: 572 LYPISNDSTV 581
>U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical
protein T13C2.6a protein.
Length = 909
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = +2
Query: 134 DEQPCNAFGGKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECM 313
DEQ C + KC + C G I +C G E C ++ T S+ +
Sbjct: 155 DEQNCTSKTSKCPDNNFQCSNGNCIFKNWVCD-----GEEDCSDGSDELLTAPSNCNRTV 209
Query: 314 DRCPENLTYK 343
++CP +K
Sbjct: 210 NQCPPGEMWK 219
>U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical
protein T13C2.6b protein.
Length = 911
Score = 28.3 bits (60), Expect = 2.7
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = +2
Query: 134 DEQPCNAFGGKCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECM 313
DEQ C + KC + C G I +C G E C ++ T S+ +
Sbjct: 157 DEQNCTSKTSKCPDNNFQCSNGNCIFKNWVCD-----GEEDCSDGSDELLTAPSNCNRTV 211
Query: 314 DRCPENLTYK 343
++CP +K
Sbjct: 212 NQCPPGEMWK 221
>AF016444-7|AAB65924.1| 204|Caenorhabditis elegans Hypothetical
protein C36C5.5 protein.
Length = 204
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/63 (25%), Positives = 26/63 (41%)
Frame = +2
Query: 164 KCTEAETDCPAGTHITAKGLCPSQQHRGVECCHSVLRKINTCRSHGGECMDRCPENLTYK 343
K E C T KG+ P ++ V+ + ++ + EC D+ EN YK
Sbjct: 72 KSCETIPTCFETPQCTPKGIAPEEKKEMVKKIKNYCSGVSYIANDFEECRDKLAENKCYK 131
Query: 344 NAD 352
+ D
Sbjct: 132 DWD 134
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 27.9 bits (59), Expect = 3.6
Identities = 25/80 (31%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Frame = +2
Query: 95 NGVIEP-SKATLVYDEQPCNAFGGKCTEAETDCPAGTHITA-KGLCPSQQHRGVECCHSV 268
NG P + + L D P N CT CP G TA K CPS + C +V
Sbjct: 188 NGNCIPLTTSNLCSDGSPPN---NTCTRDPYSCPKGHFCTAQKVCCPSTALQSSIGCSTV 244
Query: 269 LRKINTCRSHGGECMDRCPE 328
+C G C + C E
Sbjct: 245 CTIDESC-PKGMTCQNNCCE 263
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2
Query: 201 VPAGQSVSASVHFPPNALQGCSS*TNVALLGSITP 97
+PAG S SAS + GC S ++ ALL S TP
Sbjct: 296 MPAGVSPSASQKSVHSIANGCYSRSSAALLDSDTP 330
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2
Query: 201 VPAGQSVSASVHFPPNALQGCSS*TNVALLGSITP 97
+PAG S SAS + GC S ++ ALL S TP
Sbjct: 344 MPAGVSPSASQKSVHSIANGCYSRSSAALLDSDTP 378
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2
Query: 201 VPAGQSVSASVHFPPNALQGCSS*TNVALLGSITP 97
+PAG S SAS + GC S ++ ALL S TP
Sbjct: 500 MPAGVSPSASQKSVHSIANGCYSRSSAALLDSDTP 534
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
1B protein.
Length = 1107
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2
Query: 201 VPAGQSVSASVHFPPNALQGCSS*TNVALLGSITP 97
+PAG S SAS + GC S ++ ALL S TP
Sbjct: 500 MPAGVSPSASQKSVHSIANGCYSRSSAALLDSDTP 534
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 27.9 bits (59), Expect = 3.6
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -2
Query: 201 VPAGQSVSASVHFPPNALQGCSS*TNVALLGSITP 97
+PAG S SAS + GC S ++ ALL S TP
Sbjct: 344 MPAGVSPSASQKSVHSIANGCYSRSSAALLDSDTP 378
>AF068708-2|AAC17753.1| 464|Caenorhabditis elegans Hypothetical
protein C18G1.6 protein.
Length = 464
Score = 27.9 bits (59), Expect = 3.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 254 CCHSVLRKINTCRSHGGEC 310
C + +K NTCRS GG C
Sbjct: 426 CVEKIRKKPNTCRSTGGMC 444
>Z81492-2|CAB04027.1| 458|Caenorhabditis elegans Hypothetical
protein E03H4.5 protein.
Length = 458
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 245 GVECCHSVLRKINTCRSHGGECMD 316
GV C + K NTC S GG C D
Sbjct: 417 GVNNCVLQMEKPNTCVSTGGMCRD 440
>AF390558-1|AAK72007.1| 308|Caenorhabditis elegans ced-3 protease
suppressor 6 protein.
Length = 308
Score = 26.6 bits (56), Expect = 8.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 206 CEYQPDSPFQLRYTSRRTHYK 144
CE++PD F ++ S+ T YK
Sbjct: 120 CEFKPDITFPQKFLSQNTDYK 140
>AF003740-4|AAL08030.1| 308|Caenorhabditis elegans Ced-3 protease
suppressor protein 6 protein.
Length = 308
Score = 26.6 bits (56), Expect = 8.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 206 CEYQPDSPFQLRYTSRRTHYK 144
CE++PD F ++ S+ T YK
Sbjct: 120 CEFKPDITFPQKFLSQNTDYK 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,714,071
Number of Sequences: 27780
Number of extensions: 179278
Number of successful extensions: 511
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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