Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_C06
         (451 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          27   0.12 
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          25   0.50 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    25   0.50 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   6.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   6.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   8.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   8.2  

>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 26.6 bits (56), Expect = 0.12
 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -3

Query: 158 RTH-YKVVRRKLMSLYWVLLPH 96
           R H Y V R+KL+ L W +LPH
Sbjct: 127 RPHTYLVTRQKLLELGWDVLPH 148


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -3

Query: 170 YTSRRTHYKVV-RRKLMSLYWVLLPH 96
           + + R H  +V R+KL+ L W +LPH
Sbjct: 122 HDNARPHTSLVTRQKLLELGWDVLPH 147


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -3

Query: 170 YTSRRTHYKVV-RRKLMSLYWVLLPH 96
           + + R H  +V R+KL+ L W +LPH
Sbjct: 244 HDNARPHTSLVTRQKLLELGWDVLPH 269


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 63  HTKNGRRKHIFINN 22
           HTKNGR K+   +N
Sbjct: 437 HTKNGRLKYQISDN 450


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/18 (38%), Positives = 8/18 (44%)
 Frame = +2

Query: 146 CNAFGGKCTEAETDCPAG 199
           CN     CT+   DC  G
Sbjct: 638 CNIMDAICTKLTADCQPG 655


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 257 NILRPYAVDLDKDLSQ*CEYQPDSPFQLRYT 165
           NIL  +    D DLS+  ++ P      R+T
Sbjct: 446 NILNTFWTKSDVDLSRGLDFTPRGAVLARFT 476


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 341 YTSGSQDTCPCIP 303
           Y SG+Q   PC P
Sbjct: 384 YASGAQFATPCTP 396


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,222
Number of Sequences: 438
Number of extensions: 2022
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)