Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_C04
         (437 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   1.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   3.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.1  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    20   9.0  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    20   9.0  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    20   9.0  
AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    20   9.0  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 147 TSDLAPRTHLLKYPGLKHYAP 85
           +S  +PRT  +K PG K  AP
Sbjct: 204 SSGRSPRTRRVKKPGAKQGAP 224


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 30  MSTAMWSLFFIVQIL 74
           M    WS FFIV +L
Sbjct: 270 MLLTFWSAFFIVNVL 284


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 310 YRLIRIKTFCCLHWAL 357
           +RL + KTFC L  AL
Sbjct: 398 FRLSKTKTFCTLVTAL 413


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 370 ARANLRPNGDSKKFLSE*DD 311
           ++ + RPNGD+    S+ DD
Sbjct: 77  SKRSKRPNGDTNGDTSQVDD 96


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 95  CFRPGYFKRCV 127
           CF   YFK C+
Sbjct: 89  CFTTDYFKGCI 99


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 95  CFRPGYFKRCV 127
           CF   YFK C+
Sbjct: 89  CFTTDYFKGCI 99


>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 225 VDPDYWDLDV 254
           VD ++WDLD+
Sbjct: 40  VDLEFWDLDL 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,223
Number of Sequences: 336
Number of extensions: 2007
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)