Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_C04
         (437 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93382-2|CAB07612.2|  639|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AF016418-3|AAK18905.1|  210|Caenorhabditis elegans Hypothetical ...    27   6.0  
U70846-2|ABI18146.1|  647|Caenorhabditis elegans Hypothetical pr...    27   7.9  
U70846-1|AAB09104.4|  510|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z93382-2|CAB07612.2|  639|Caenorhabditis elegans Hypothetical
           protein F45G2.3 protein.
          Length = 639

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 189 EQRIPPPLVQTGCCTSDLAPRTHLLKYPGLKH 94
           E+  PPP+++    T D A +TH  + P L H
Sbjct: 517 EELKPPPILRKAVSTPDSARKTHKFQSPLLNH 548


>AF016418-3|AAK18905.1|  210|Caenorhabditis elegans Hypothetical
           protein C49G7.10 protein.
          Length = 210

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 243 DLDVFEPTIADYDKFDLTLTKRISSYSDKNF 335
           D  VF+  +A Y K+ L   KR  + +DKN+
Sbjct: 2   DKTVFQQDLAPYVKYSLNKKKRWETGNDKNY 32


>U70846-2|ABI18146.1|  647|Caenorhabditis elegans Hypothetical
           protein D1073.1b protein.
          Length = 647

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +3

Query: 207 PDNATLVDPDYWDLDVFEPTIADYDKFDLTLTKRISSYSDKNF 335
           P     VD    D D    T    D   + +TK  S+YS+ NF
Sbjct: 60  PVKVAFVDKTRLDTDFLVVTGYPIDNISMAITKMQSNYSETNF 102


>U70846-1|AAB09104.4|  510|Caenorhabditis elegans Hypothetical
           protein D1073.1a protein.
          Length = 510

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +3

Query: 207 PDNATLVDPDYWDLDVFEPTIADYDKFDLTLTKRISSYSDKNF 335
           P     VD    D D    T    D   + +TK  S+YS+ NF
Sbjct: 60  PVKVAFVDKTRLDTDFLVVTGYPIDNISMAITKMQSNYSETNF 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,514,324
Number of Sequences: 27780
Number of extensions: 175417
Number of successful extensions: 341
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 341
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 745968860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)