Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_C02
         (593 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           25   0.64 
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   4.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   4.5  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 11/41 (26%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 198 DGRT-NVPLISIKQESDKNSDARFAAVEIKSFAEVEQTVKT 317
           DG++ +VP+IS+K E++     +   +++  + E +QT ++
Sbjct: 214 DGKSEDVPVISLKNENELPQQHKTNVMDVMQWWEQQQTPRS 254


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 411 PNGLTLIVLNARTIPTQADLDKTVSGIPNLS 503
           PN   ++ + A     + D D ++SG+P LS
Sbjct: 281 PNNKLILGIPAYGRAWKMDEDSSISGVPPLS 311


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 11/39 (28%), Positives = 16/39 (41%)
 Frame = +3

Query: 330 CGDKEHAFLAIKEIDDXYYVVYSAPFTPNGLTLIVLNAR 446
           C D E  F  + + D    +V      PN  TLI +  +
Sbjct: 381 CTDVEQKFFQVSKFDKRSKLVSILEKAPNERTLIFVETK 419


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,601
Number of Sequences: 336
Number of extensions: 2874
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)