Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_C02
         (593 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2391| Best HMM Match : No HMM Matches (HMM E-Value=.)               38   0.005
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)          33   0.13 
SB_52639| Best HMM Match : 7tm_1 (HMM E-Value=0)                       29   2.1  
SB_43870| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)                 29   3.7  
SB_13785| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_59385| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.6  
SB_52196| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.6  
SB_7912| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.6  

>SB_2391| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 282

 Score = 38.3 bits (85), Expect = 0.005
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = +3

Query: 276 EIKSFAEVEQTVKTAKCECGDKEHAFLAIKEIDDXYYVVYSAPFTPNGLTLIVLNARTIP 455
           ++  F ++   +K  K  C  K HA     E+ +  +  Y   FTPN   +++++  TIP
Sbjct: 192 DVHRFEKISNIIKQFKLSCS-KLHAHFQSMEVKNSGFAAYIDVFTPNTYVMVIMSDTTIP 250

Query: 456 TQA 464
           + A
Sbjct: 251 SAA 253


>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
          Length = 1494

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
 Frame = -2

Query: 340 LSPHSHFAVFTVCSTSAKDFISTAANRASEFLSDSCL-IEINGTLVLPSQVQWTSLTLVT 164
           L+  S  +VF   S+S  DF+ T+++  S FL+ S L  +   +  LPS    +S +L  
Sbjct: 568 LTSSSSLSVFLTSSSSLSDFL-TSSSSLSVFLTSSSLPSDFLTSSSLPSDFLTSSSSLSV 626

Query: 163 VNQSQPVPSSVMLGDMPMETALPRNLSISA*ATTKS 56
              S  +PS  +     +   L  + S+S   T+ S
Sbjct: 627 FPTSSSLPSDFLTSSSSLSDFLTSSSSLSVFPTSSS 662



 Score = 29.9 bits (64), Expect = 1.6
 Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
 Frame = -2

Query: 376  SSISLIAKNACSLSPH----SHFAVFTVCSTSAKDFISTAANRASEFLSDSCLIEINGTL 209
            SS+S+   ++ SLS      S  + F   S+S  DF++++++ +    S S   +   + 
Sbjct: 817  SSLSVFLTSSSSLSDFLTSSSSLSDFLTSSSSLSDFLTSSSSLSVFPTSSSLPSDFLTSS 876

Query: 208  VLPSQVQWTSLTLVTVNQSQPVPSSVMLGDMPMETALPRNLSISA*ATTKS 56
             LPS    +S +L     S  +PS  +     +   L  + S+S   T+ S
Sbjct: 877  SLPSDFLTSSSSLSVFPTSSSLPSDFLTSSSSLSDFLTSSSSLSVFPTSSS 927


>SB_52639| Best HMM Match : 7tm_1 (HMM E-Value=0)
          Length = 359

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -1

Query: 347 VLFVTAFTFRCFHRLFYFCEGFYFHGCESCIRILI*FLFNRN*RD 213
           ++F +  TF CF + FYF   F  H   S I   +   FN N R+
Sbjct: 267 IMFFSPQTFPCFSKPFYFVSLFLGHS-NSAINPFLYSFFNANFRE 310


>SB_43870| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
          Length = 869

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
 Frame = +3

Query: 111 IGISPNITELGTGCDWFTVTKVSEVHCTCDGRTNVPLISIKQE--SDKNSDAR----FAA 272
           I I+P I ++ T    FTV + +E+ CTC        I  K    SD+NS  R    + A
Sbjct: 123 IRIAPQIIDITTNFT-FTVGQTAELMCTCYFNALDDTIEFKWHAISDRNSVCRNPFSYNA 181

Query: 273 VEIKSFAEVEQTVKTAKCECGD 338
           V +KS  + +  V       GD
Sbjct: 182 VVVKSDDDNDDGVSDVDDASGD 203


>SB_13785| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 386

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +3

Query: 387 VVYSAPFTPNGLTLIVLNARTIPTQA--DLDKTVSGIPNLS 503
           +  S+P+ PN L +I ++A   P +A  ++ +   G+P+ S
Sbjct: 291 ITKSSPYLPNNLVVIQISAEGGPDEAFKEISRVFEGVPDSS 331


>SB_59385| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1038

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 350  CVLFVTAFTFRCFHRLFYFCEGFYFHGCESC 258
            C  F T  T +CFHR       + F G ++C
Sbjct: 917  CQYFTTETTCKCFHRSELRQVSYIFRGAKNC 947


>SB_52196| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 428

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 273 VEIKSFAEVEQTVKTAKCECGDKEH 347
           VE+ ++A+ EQ     KC C  K+H
Sbjct: 266 VEVHTYADDEQDCCQGKCNCSHKKH 290


>SB_7912| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1020

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 18/67 (26%), Positives = 30/67 (44%)
 Frame = -2

Query: 325 HFAVFTVCSTSAKDFISTAANRASEFLSDSCLIEINGTLVLPSQVQWTSLTLVTVNQSQP 146
           H  V  +C  S     S  AN+     + + L+E     +  ++V W  LT   ++ SQ 
Sbjct: 171 HHLVDALCQLSTTSMESAQANKEPSLFAVAKLLETGLNNLHRARVLWKPLTAHLLDVSQV 230

Query: 145 VPSSVML 125
           V S ++L
Sbjct: 231 VYSIMLL 237


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,599,982
Number of Sequences: 59808
Number of extensions: 354338
Number of successful extensions: 817
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)