Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_B24
         (493 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    26   0.21 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   0.86 
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   1.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.0  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   2.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   4.6  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 25.8 bits (54), Expect = 0.21
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +1

Query: 1   GGAQEDRPGDCCPWKGYPRSR*VHWYNGQASPG 99
           GGA +  PG C P  G  +    H Y G  S G
Sbjct: 40  GGAVQPDPGSCDPSVGLRQGIPPHHYGGPPSGG 72


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 0.86
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -3

Query: 377 THWHSPRW 354
           THWHSPR+
Sbjct: 69  THWHSPRF 76


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 251 DDLAQRCAQYKKDGCH 298
           D++A RCA  +++ CH
Sbjct: 161 DEIAIRCAFLERENCH 176


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 119 QCFRLQCPGDACP 81
           +CF ++CP   CP
Sbjct: 704 KCFTMECPQVTCP 716


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
 Frame = +1

Query: 298 LCQVALRIEDRPQ---HSIVPSHLGECQCVGSLRLHLP 402
           L  +A RI    Q   H   P H  E  C+  L  H+P
Sbjct: 330 LASLAFRIFQSTQYVRHKNTPYHTPEPDCIHELLGHMP 367


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = -2

Query: 465 SKSCSPSGKTSGSTIGTIR*LWQMEA*RANTLAFSKMAWYDGVLRPIFNTQRH 307
           S +CSP G + GS++        M A   N +  S M  Y  +  PI N  RH
Sbjct: 39  SMNCSPQGASFGSSMLNSGMPGGM-AMNGNGMTSSSMG-YTTIGSPISNRIRH 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,474
Number of Sequences: 336
Number of extensions: 2843
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)