Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_B23
         (370 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical pr...   146   6e-36
AF099919-10|AAC68792.1|  205|Caenorhabditis elegans Max-like pro...    29   0.79 
AL021474-2|CAA16309.3|  655|Caenorhabditis elegans Hypothetical ...    28   1.8  
AF022972-5|AAC48237.1|  523|Caenorhabditis elegans Udp-glucurono...    28   1.8  
Z99942-2|CAB17072.1|  468|Caenorhabditis elegans Hypothetical pr...    27   3.2  
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p...    27   4.2  
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical...    27   4.2  
AL032643-6|CAA21657.1|  538|Caenorhabditis elegans Hypothetical ...    27   4.2  
Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical pr...    27   5.5  
AF040655-7|AAB95044.2|  565|Caenorhabditis elegans Hypothetical ...    27   5.5  
Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical pr...    26   7.3  
AF022972-11|AAN84825.1|  370|Caenorhabditis elegans Udp-glucuron...    26   7.3  
AF022972-10|AAC48233.2|  523|Caenorhabditis elegans Udp-glucuron...    26   7.3  

>Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical
           protein F10B5.1 protein.
          Length = 214

 Score =  146 bits (353), Expect = 6e-36
 Identities = 67/88 (76%), Positives = 73/88 (82%)
 Frame = +3

Query: 93  VPDPKIGISDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQF 272
           VPD KI I DLG KRA VD FP CVH++S+E E LSSEALEA RIC NKY+VKNCGKD F
Sbjct: 26  VPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHLSSEALEAARICANKYMVKNCGKDGF 85

Query: 273 HIRMRLHPFHVIRIIKMLSCAGADRLQT 356
           H+R+R HPFHV RI KMLSCAGADRLQT
Sbjct: 86  HLRVRKHPFHVTRINKMLSCAGADRLQT 113



 Score = 36.7 bits (81), Expect = 0.005
 Identities = 23/45 (51%), Positives = 26/45 (57%)
 Frame = +2

Query: 8   MGRRPARCYRYCTN*TRYSLKSFGFGRGCA*PKDRYFGLGQKESD 142
           MGRRPARCYRY  N  +   KS  F RG    K R F LG K ++
Sbjct: 1   MGRRPARCYRYIKN--KPYPKS-RFCRGVPDAKIRIFDLGNKRAN 42


>AF099919-10|AAC68792.1|  205|Caenorhabditis elegans Max-like
           protein 2 protein.
          Length = 205

 Score = 29.5 bits (63), Expect = 0.79
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +3

Query: 105 KIGISDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGR 224
           K  ISD  K+ A ++     + +++ EYEQ++S   +AG+
Sbjct: 102 KTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141


>AL021474-2|CAA16309.3|  655|Caenorhabditis elegans Hypothetical
           protein Y32F6A.3 protein.
          Length = 655

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
 Frame = +1

Query: 205 RRWKQAVSVATSTS-----*RTAVKISSTSG*DYTPS 300
           RRWK+ V +AT+TS      R+ V+ +STS    TP+
Sbjct: 504 RRWKKVVPIATNTSVSSSTPRSVVRTTSTSSVPTTPT 540


>AF022972-5|AAC48237.1|  523|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein38 protein.
          Length = 523

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 149 IHCRSLFAQVRNTDLWVRHN 90
           I C  LF Q+RNT + VRHN
Sbjct: 387 ILCPQLFDQMRNTKMLVRHN 406


>Z99942-2|CAB17072.1|  468|Caenorhabditis elegans Hypothetical
           protein H13N06.3a protein.
          Length = 468

 Score = 27.5 bits (58), Expect = 3.2
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = +3

Query: 72  PSGLAGVVPDPKIGI---SDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRI 227
           P G AG  PD  +     S +     +++DF  C++ + +  + +++E LE G I
Sbjct: 18  PPGRAGSRPDCPMNCEKESQMTIASQSIEDFKECLYQMQEARKSVTNEILETGHI 72


>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
            protein C53B4.4d protein.
          Length = 1301

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 18/71 (25%), Positives = 34/71 (47%)
 Frame = -2

Query: 267  DLYRSSLRGTCCNRYGLLPAPQNSAARTHQTLSARIVGSHPLSLSFCPSPKYRSLGQAQP 88
            D  ++++R T  NR  ++     S+A+  Q L  R+     + L +C + +    G++ P
Sbjct: 1175 DRIQTAIRETKDNRLSVMQNGGESSAK-FQGLDERLQALAVVMLHYCSALQDCQSGRSTP 1233

Query: 87   RPNPKDFKEYR 55
             P P D  + R
Sbjct: 1234 APPPDDDNQKR 1244


>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
           protein Y116A8C.36 protein.
          Length = 1097

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 14/59 (23%), Positives = 28/59 (47%)
 Frame = -2

Query: 231 NRYGLLPAPQNSAARTHQTLSARIVGSHPLSLSFCPSPKYRSLGQAQPRPNPKDFKEYR 55
           +R+G +   Q       + +S   + S P+S++  PS ++ S+    P  N ++  E R
Sbjct: 107 SRHGSVDYSQTLPPAIDRRMSQSYIPSAPVSIAGTPSSRHNSISAGSPLNNDRNVFEGR 165


>AL032643-6|CAA21657.1|  538|Caenorhabditis elegans Hypothetical
           protein Y54E5A.4 protein.
          Length = 538

 Score = 27.1 bits (57), Expect = 4.2
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -1

Query: 151 SSTVALFLPKSEIPIFGSGTTPAKPEG 71
           S+T       S +P+FGS TT A P G
Sbjct: 62  STTAPTPASTSSVPLFGSTTTTASPSG 88


>Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical
           protein F33C8.3 protein.
          Length = 282

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -2

Query: 303 HGRGVISSGCGTDLYRSSLRGTCCNRYGLLPAPQN 199
           HG G      GT   R  +  +CCN +G L  P N
Sbjct: 183 HGIGAFGGNKGTGYGR--VPSSCCNEHGKLSYPNN 215


>AF040655-7|AAB95044.2|  565|Caenorhabditis elegans Hypothetical
           protein T24E12.9 protein.
          Length = 565

 Score = 26.6 bits (56), Expect = 5.5
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -2

Query: 210 APQNSAARTHQTLSARIVGSHPLSLSFCPSPKYRSLGQAQPRP 82
           A  N A   +Q  + + + SHP +L   P  KY++L Q   RP
Sbjct: 88  ATANDAMPENQPAAQQNLFSHPYALLEQPPQKYQNLEQQLVRP 130


>Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical
           protein F57C7.4 protein.
          Length = 1484

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 73  LRVWPGLCLTQRSVFRTWAKRER 141
           L +WPGL   +  V R WA  E+
Sbjct: 699 LAMWPGLMSGKTFVIRLWASNEK 721


>AF022972-11|AAN84825.1|  370|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein39, isoform b
           protein.
          Length = 370

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 149 IHCRSLFAQVRNTDLWVRHN 90
           I C  LF Q+RN  + VRHN
Sbjct: 234 ILCPQLFDQMRNAKMLVRHN 253


>AF022972-10|AAC48233.2|  523|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein39, isoform a
           protein.
          Length = 523

 Score = 26.2 bits (55), Expect = 7.3
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 149 IHCRSLFAQVRNTDLWVRHN 90
           I C  LF Q+RN  + VRHN
Sbjct: 387 ILCPQLFDQMRNAKMLVRHN 406


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,627,335
Number of Sequences: 27780
Number of extensions: 204190
Number of successful extensions: 625
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)