Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_B23
         (370 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    23   1.5  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   1.5  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   1.5  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   3.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   4.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   4.6  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   6.1  
M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    21   6.1  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    20   8.1  

>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 91  LCLTQRSVFRTWAKRERQWMTSH 159
           LCLT+R +   +  R  +W   H
Sbjct: 45  LCLTERQIKIWFQNRRMKWKKEH 67


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/19 (47%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +1

Query: 49  LNPV-FLKILRVWPGLCLT 102
           L PV + K + +W G+CLT
Sbjct: 295 LPPVSYTKAIDIWTGVCLT 313


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 9/19 (47%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +1

Query: 49  LNPV-FLKILRVWPGLCLT 102
           L PV + K + +W G+CLT
Sbjct: 295 LPPVSYTKAIDIWTGVCLT 313


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 159 VGSHPLSLSFCPSPKYRSLGQAQPRPNPKDFKEY 58
           +G+   SL+  P+ +  + G + PRP P   KEY
Sbjct: 9   MGAVMTSLTLGPAGQVLA-GSSSPRPKPLLKKEY 41


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 129 CPSPKYRSLGQAQPRP 82
           CP+P+YR   Q    P
Sbjct: 264 CPTPEYRWYAQTGSEP 279


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 129 CPSPKYRSLGQAQPRP 82
           CP+P+YR   Q    P
Sbjct: 264 CPTPEYRWYAQTGSEP 279


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 12/46 (26%), Positives = 18/46 (39%)
 Frame = -2

Query: 213 PAPQNSAARTHQTLSARIVGSHPLSLSFCPSPKYRSLGQAQPRPNP 76
           P P +   R    L A    + P+ +S    P  R   +A+P   P
Sbjct: 80  PRPPHPRLRREAELEAEPGNNRPVYISQPRPPHPRLRREAEPEAEP 125



 Score = 20.6 bits (41), Expect = 6.1
 Identities = 12/46 (26%), Positives = 18/46 (39%)
 Frame = -2

Query: 213 PAPQNSAARTHQTLSARIVGSHPLSLSFCPSPKYRSLGQAQPRPNP 76
           P P +   R    L A    + P+ +S    P  R   +A+P   P
Sbjct: 136 PRPPHPRLRREAELEAEPGNNRPVYISQPRPPHPRLRREAEPEAEP 181


>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +1

Query: 91  LCLTQRSVFRTWAKRERQWMTSHYACT 171
           LCLT+R +   +  R  +W   +   T
Sbjct: 45  LCLTERQIKIWFQNRRMKWKKENARAT 71


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 91  LCLTQRSVFRTWAKRERQW 147
           LCLT+R +   +  R  +W
Sbjct: 307 LCLTERQIKIWFQNRRMKW 325


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,297
Number of Sequences: 438
Number of extensions: 2981
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)