Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_B21
(265 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 126 5e-31
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 126 5e-31
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 101 2e-23
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 89 7e-20
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 44 3e-06
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 25 1.7
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 24 3.0
SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor Fep1|Sc... 24 4.0
SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synth... 24 4.0
SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase |Schiz... 23 5.3
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 23 5.3
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 23 5.3
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 23 5.3
SPBC337.15c |coq7||ubiquinone biosynthesis protein Coq7|Schizosa... 23 7.0
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 23 7.0
SPAC5H10.10 |||NADPH dehydrogenase |Schizosaccharomyces pombe|ch... 23 7.0
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 23 9.2
SPBC685.09 |orc2|orp2|origin recognition complex subunit Orc2|Sc... 23 9.2
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 126 bits (304), Expect = 5e-31
Identities = 56/84 (66%), Positives = 65/84 (77%)
Frame = +1
Query: 4 LTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNES 183
L A P + EPV+L EIQ E A+GGIY VLN++RGHVF E Q GTP++ +KAYLPVNES
Sbjct: 718 LLASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNES 777
Query: 184 FGFTADLRSNTGGQAFPQCVFDHW 255
FGFT +LR T GQAFPQ VFDHW
Sbjct: 778 FGFTGELRQATAGQAFPQLVFDHW 801
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 126 bits (304), Expect = 5e-31
Identities = 56/84 (66%), Positives = 65/84 (77%)
Frame = +1
Query: 4 LTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNES 183
L A P + EPV+L EIQ E A+GGIY VLN++RGHVF E Q GTP++ +KAYLPVNES
Sbjct: 718 LLASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNES 777
Query: 184 FGFTADLRSNTGGQAFPQCVFDHW 255
FGFT +LR T GQAFPQ VFDHW
Sbjct: 778 FGFTGELRQATAGQAFPQLVFDHW 801
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 101 bits (241), Expect = 2e-23
Identities = 45/87 (51%), Positives = 62/87 (71%)
Frame = +1
Query: 4 LTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNES 183
LTA PRLMEPVY+ E+ P ++ IY +L RRRGHV ++ G+P+++V+A +PV +S
Sbjct: 834 LTASPRLMEPVYMVEVHAPADSLPIIYDLLTRRRGHVLQDIPRPGSPLYLVRALIPVIDS 893
Query: 184 FGFTADLRSNTGGQAFPQCVFDHWQIL 264
GF DLR +T GQA Q VFDHWQ++
Sbjct: 894 CGFETDLRVHTQGQAMCQMVFDHWQVV 920
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1000
Score = 89.4 bits (212), Expect = 7e-20
Identities = 37/83 (44%), Positives = 55/83 (66%)
Frame = +1
Query: 16 PRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGFT 195
PRLM +Y C++Q +G +YGV+++RRG V +E GTP F+VKA +PV ESFGF
Sbjct: 860 PRLMLAMYSCDVQATSEVLGRVYGVVSKRRGRVIDEEMKEGTPFFIVKALIPVVESFGFA 919
Query: 196 ADLRSNTGGQAFPQCVFDHWQIL 264
++ T G A+PQ +F +++L
Sbjct: 920 VEILKRTSGAAYPQLIFHGFEML 942
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 44.0 bits (99), Expect = 3e-06
Identities = 21/74 (28%), Positives = 40/74 (54%)
Frame = +1
Query: 4 LTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNES 183
L A P ++EP+ I P GG+ G L++R+ + + F ++A +P+N
Sbjct: 668 LQANPMVLEPIMNVSITAPVEHQGGVIGNLDKRKATIVDSD--TDEDEFTLQAEVPLNSM 725
Query: 184 FGFTADLRSNTGGQ 225
F +++D+R+ T G+
Sbjct: 726 FSYSSDIRALTKGK 739
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 25.0 bits (52), Expect = 1.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 79 IYGVLNRRRGHVFEESQVAGTPMFVVKAYLPVNESFGF 192
++ LNR++ + F Q+ V+ A L V +FGF
Sbjct: 275 LFDHLNRKKTNNFNTHQILSQSDVVLNALLSVATAFGF 312
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 24.2 bits (50), Expect = 3.0
Identities = 10/34 (29%), Positives = 14/34 (41%)
Frame = -2
Query: 153 HEHGCAGDLRLLEHVPAPSVQHAVDTTDRHLRTL 52
H HGC R +H ++ V+ H TL
Sbjct: 499 HRHGCCVVQRCFDHASPAQIEQLVEHIVPHALTL 532
>SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor
Fep1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 564
Score = 23.8 bits (49), Expect = 4.0
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = -3
Query: 224 CPPVLERRSAVNPNDSLTGRYAFTTNMGVPATCDSSNTCPRRLFSTP*IPPTATS 60
CP + R ++N + S +GR + + N + + P L S P I T+
Sbjct: 88 CPALNNRIRSLNASKSQSGRKSLSPNPSSVPSSTETKASPTPLESKPQIVSDTTT 142
>SPAC6F12.10c |ade3|min11|phosphoribosylformylglycinamidine synthase
Ade3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1323
Score = 23.8 bits (49), Expect = 4.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 58 PEVAVGGIYGVLNRRRGHVFEESQVAGTPMFVV 156
P +A GGI + R+ H F++S G+P+ V+
Sbjct: 416 PIMAAGGIGRI---RKQHAFKKSIAPGSPIIVL 445
>SPCC794.10 |||UTP-glucose-1-phosphate uridylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 499
Score = 23.4 bits (48), Expect = 5.3
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -2
Query: 144 GCAGDLRLLEHVPAPSVQHAVDTTDR 67
G + DL +L HV ++++++ TD+
Sbjct: 248 GASVDLNILSHVIDNQIEYSMEITDK 273
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 23.4 bits (48), Expect = 5.3
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = -3
Query: 227 ACPPVLERRSAVNPNDSLTGRYAFTTNMGVPATCD-SSNTCPRRLFSTP*IPPTATS 60
A PP SA+ P G A + N G+PA + L S P PP+ S
Sbjct: 1893 AGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLTGKETAVPLSSMPNAPPSVAS 1949
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 23.4 bits (48), Expect = 5.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 173 STSRSGSPPTCAPTPEGRRSRSASSITGRSC 265
+TS GS P GRR + SITG+ C
Sbjct: 167 ATSARGSK-RIVQVPGGRRIYTVDSITGQVC 196
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 23.4 bits (48), Expect = 5.3
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 181 SFGFTADLRSNTGGQAF 231
SFG T D +SNT G+ F
Sbjct: 699 SFGLTLDDKSNTPGKNF 715
>SPBC337.15c |coq7||ubiquinone biosynthesis protein
Coq7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 216
Score = 23.0 bits (47), Expect = 7.0
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 105 APSVQHAVDTTDRHLRTLD 49
AP++QH D HL T D
Sbjct: 76 APTIQHMWDQEKYHLATFD 94
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 23.0 bits (47), Expect = 7.0
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 98 DGAGTCSRSRKSPAHP---CSW*RRTCPSTSRSGSPPTCAPTPEGRRSRSASS 247
+G+ CS+ SP+ CS +++C S+ + P C+ +G S +S
Sbjct: 221 EGSSCCSKKDSSPSEKPSCCSQEKKSCCSSKK---PSCCSQEKKGCCSTEKTS 270
>SPAC5H10.10 |||NADPH dehydrogenase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 392
Score = 23.0 bits (47), Expect = 7.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 207 LQHRRAGVPAVRLRSL 254
LQHR PA RLR L
Sbjct: 24 LQHRMVHAPATRLRCL 39
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 22.6 bits (46), Expect = 9.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +2
Query: 122 SRKSPAHP--CSW*RRTCPSTSRSGSPPTCA-PTPEGRRSRSASS 247
S+ P+ P SW R+T +TS +GS P SR++S+
Sbjct: 92 SKTGPSKPRIVSWVRKTASNTSVAGSDSVSRDKIPFSASSRASST 136
>SPBC685.09 |orc2|orp2|origin recognition complex subunit
Orc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 22.6 bits (46), Expect = 9.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 115 FEESQVAGTPMFVVKAYLP 171
F E ++ P+FVVK Y P
Sbjct: 275 FVEKKLPCFPIFVVKGYFP 293
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,148,557
Number of Sequences: 5004
Number of extensions: 20948
Number of successful extensions: 68
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 53488084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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