Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_B20
         (579 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    25   0.46 
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      24   1.1  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.6  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 7/31 (22%), Positives = 16/31 (51%)
 Frame = -2

Query: 563 QHRIRRNDVIGGSAIVWQGEMEVLWLEPHIW 471
           Q  + +  ++GG A +W  + +   L+  +W
Sbjct: 539 QLHLNKKQILGGEACLWSEQFDETSLDTRLW 569



 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 183 CPVQISHYLQPQTHYDIFTNIRTSAHRRPYSLQHEQHP 296
           C +    YL  Q   ++ T+     +R+PY  Q + HP
Sbjct: 16  CCILFFIYLYWQQTSNLTTSKLLYTYRQPYPRQKKSHP 53


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 289 CSCCSEYGLRWADVRMF 239
           C CC E G R A V +F
Sbjct: 87  CMCCQESGEREASVSLF 103


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 539 VIGGSAIVWQGEMEVLWLEPHIW 471
           V+GG   +W  ++    LE  IW
Sbjct: 505 VLGGEVCLWSEQVGPDSLETRIW 527


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,518
Number of Sequences: 336
Number of extensions: 3043
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)