Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_B20
         (579 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    29   2.4  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    29   2.4  
U53339-2|AAA96198.2|  542|Caenorhabditis elegans Nematode astaci...    28   4.2  
AJ561218-1|CAD99218.1|   90|Caenorhabditis elegans NAS-29 protei...    28   4.2  
Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z54342-6|CAA91148.1|  459|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z81459-1|CAB03827.3|  731|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z79604-6|CAB97241.2|  731|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z50739-2|CAA90602.2|  381|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 463 CSSQMWGSNQSTSISPCQTIAEPPITSLRRILC 561
           C+S +WG   + S  P  T+ +P + S+R+  C
Sbjct: 51  CTSAIWGDWGAWSTCPTVTVIDPTVVSVRKRDC 83


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 463 CSSQMWGSNQSTSISPCQTIAEPPITSLRRILC 561
           C+S +WG   + S  P  T+ +P + S+R+  C
Sbjct: 51  CTSAIWGDWGAWSTCPTVTVIDPTVVSVRKRDC 83


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 463 CSSQMWGSNQSTSISPCQTIAEPPITSLRRILC 561
           C+S +WG   + S  P  T+ +P + S+R+  C
Sbjct: 51  CTSAIWGDWGAWSTCPTVTVIDPTVVSVRKRDC 83


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 463 CSSQMWGSNQSTSISPCQTIAEPPITSLRRILC 561
           C+S +WG   + S  P  T+ +P + S+R+  C
Sbjct: 51  CTSAIWGDWGAWSTCPTVTVIDPTVVSVRKRDC 83


>U53339-2|AAA96198.2|  542|Caenorhabditis elegans Nematode astacin
           protease protein29 protein.
          Length = 542

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
 Frame = +2

Query: 128 WSKPVSRAGMERVARALGVSCTDIALFA--ATDALRYFYEHSHVSPPETILTTARAASED 301
           WS     A   +   ++G  C    + +     AL  F+E S     E+++   R    D
Sbjct: 212 WSTVGRDASQGKQVVSIGNGCEHFGVTSHELAHALGIFHEQSRFDRDESVVFNPRVVERD 271

Query: 302 FLFTFAE 322
            LF FA+
Sbjct: 272 LLFNFAK 278


>AJ561218-1|CAD99218.1|   90|Caenorhabditis elegans NAS-29 protein
           protein.
          Length = 90

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
 Frame = +2

Query: 128 WSKPVSRAGMERVARALGVSCTDIALFA--ATDALRYFYEHSHVSPPETILTTARAASED 301
           WS     A   +   ++G  C    + +     AL  F+E S     E+++   R    D
Sbjct: 6   WSTVGRDASQGKQVVSIGNGCEHFGVTSHELAHALGIFHEQSRFDRDESVVFNPRVVERD 65

Query: 302 FLFTFAE 322
            LF FA+
Sbjct: 66  LLFNFAK 72


>Z83223-4|CAB05716.2|  534|Caenorhabditis elegans Hypothetical
           protein E01G4.4 protein.
          Length = 534

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 186 PVQISHYLQPQTHYDIFTNIRTSAHRRPYSLQHE 287
           PV   HY Q Q HY   T+  +S++   Y  Q +
Sbjct: 135 PVHQQHYQQQQQHYGAATSAPSSSYNVMYQQQED 168


>Z54342-6|CAA91148.1|  459|Caenorhabditis elegans Hypothetical
           protein C08H9.11 protein.
          Length = 459

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
 Frame = +2

Query: 14  LVEIYKAPSKLWTDTIRADDGKRHLLQ----TVS----LCGRKVVSWSKPVSRAGMER 163
           L++I+   SK  + T + +   +HL+Q    T+S     CG+++V +      AG+ R
Sbjct: 70  LIKIFIPSSKKLSTTTKTNSPPKHLIQESHQTISPPAAFCGKRIVGYFAEFENAGLSR 127


>Z81459-1|CAB03827.3|  731|Caenorhabditis elegans Hypothetical
           protein C03H12.1 protein.
          Length = 731

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +3

Query: 138 LYLGRVWNE*HGHWACPVQI--SHYLQPQTHYDIFTNIRTSAHRRPYSLQHEQHPRI 302
           L++G +W+        P  +  +H+ + +   D F+ +  S  + PY+L  +Q P+I
Sbjct: 553 LFMGGIWHSASSSAIAPFHLVANHFKESKNLID-FSIVDVSETKLPYNLNFDQLPKI 608


>Z79604-6|CAB97241.2|  731|Caenorhabditis elegans Hypothetical
           protein C03H12.1 protein.
          Length = 731

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +3

Query: 138 LYLGRVWNE*HGHWACPVQI--SHYLQPQTHYDIFTNIRTSAHRRPYSLQHEQHPRI 302
           L++G +W+        P  +  +H+ + +   D F+ +  S  + PY+L  +Q P+I
Sbjct: 553 LFMGGIWHSASSSAIAPFHLVANHFKESKNLID-FSIVDVSETKLPYNLNFDQLPKI 608


>Z50739-2|CAA90602.2|  381|Caenorhabditis elegans Hypothetical
           protein F13D2.3 protein.
          Length = 381

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 478 WGSNQSTSISPCQTIAEPPITSLRRIL 558
           + S QS  +   +TI  PP T+LRR L
Sbjct: 283 YASQQSVRVPLAETIRHPPTTALRRQL 309


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,043,018
Number of Sequences: 27780
Number of extensions: 270942
Number of successful extensions: 759
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 759
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)