Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_B19
         (548 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.7  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    21   6.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.2  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   8.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 439 IQLMRASFKSILNVFLYAI 495
           ++++   F SIL +FLYA+
Sbjct: 139 VKVLANEFLSILPIFLYAL 157


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 439 IQLMRASFKSILNVFLYAI 495
           ++++   F SIL +FLYA+
Sbjct: 177 VKVLANEFLSILPIFLYAL 195


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 45  RDNNNELKKKARKH 4
           RD N E KKK R++
Sbjct: 239 RDRNREYKKKDRRY 252


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 330 SQILYNALHSIRKHLSYYSISNETPYVYIYIHTSS 226
           S++L +A HS    +S Y ISN      + + TS+
Sbjct: 489 SELLGHAFHSQVLSMSDYDISNIEHEALLLVITST 523


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 247 YIYTYKQSLSYVSSFDLRL 191
           YIYT K +++    FD+ +
Sbjct: 46  YIYTIKSNMAKTLQFDVHM 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,508
Number of Sequences: 438
Number of extensions: 3195
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)