Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_B18
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.40 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   2.8  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   2.8  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   3.8  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 548 CLSFYLATFSNIFILCLHVSVSMLSVRVCI 637
           C +F + T   +F+LC++     L + +CI
Sbjct: 269 CCAFIIFTMHLLFLLCIYYFYCALIILLCI 298



 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 554 SFYLATFSNIFILCLHVSVSMLSVRVCI 637
           +F + T   +F+LC++  V  L   +CI
Sbjct: 119 AFIIFTVHLLFLLCIYYFVVPLFFLLCI 146


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 309 SYPVINCPPPSDKLVQDIWSSLSVPSGLGCATVIYP 416
           SY     PP +  +  D ++S++ P+     T +YP
Sbjct: 289 SYAPERYPPLAQGVNDDAFNSVATPTPTSVMTELYP 324


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 429 LMAAQIIGLQDYLIWARLRVKQLEMATALRLADQKLRNL 545
           ++ + I+G      WA+L  K   +   L+  DQK RNL
Sbjct: 91  VLVSIILGSLKTKEWAKLNNKFQYIDEKLKTRDQKERNL 129


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 291 VLSGNTSYPVINCPPPSDKLVQDIWSSLSVPS 386
           V +G+TS P I     ++     IWS  S+ S
Sbjct: 195 VSTGSTSSPTIASATYTNSANSSIWSPASIDS 226


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 336 PSDKLVQDIWSSLSVP 383
           PSDK +  IW++ S P
Sbjct: 437 PSDKYIIQIWTTGSDP 452


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -2

Query: 293  YWSKPVRAASNGD 255
            YW  P R   NGD
Sbjct: 1015 YWKPPAREEWNGD 1027


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,262
Number of Sequences: 336
Number of extensions: 3358
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)