Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_B16
         (672 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    64   1e-12
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.6  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   6.1  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    22   6.1  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    22   6.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   6.1  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 64.1 bits (149), Expect = 1e-12
 Identities = 60/188 (31%), Positives = 85/188 (45%), Gaps = 4/188 (2%)
 Frame = +2

Query: 59  TKDCAHPVVTAPIEKTIPHPDY--IPNDVQGRHDIALIRLMVTAPYTDFVRPICLPSLDY 232
           +K   +  V   I K I HP Y  I  D    +DIAL++      + D V P CLP   +
Sbjct: 224 SKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHF 283

Query: 233 TQQPPADFEMYVAGWGMYKQFISGTGLSSTVKQHVKLPYVDRDRCQAAQRTLRGGEALVI 412
                A  ++ V GWG      S  G+ S + Q   L  + +  C         G  +V 
Sbjct: 284 LDSF-AGSDVTVLGWG----HTSFNGMLSHILQKTTLNMLTQVECYKYY-----GNIMV- 332

Query: 413 TKEQLCAGGKPGEDACRGDSGGPLMYEVGNT--FVMVGSVSYGPKYCGTRNIPGVYTNVY 586
               +CA  K G+DAC+ DSGGP++++   T   V +G +S+G + CG    P   T V 
Sbjct: 333 --NAMCAYAK-GKDACQMDSGGPVLWQNPRTKRLVNIGIISWGAE-CG--KYPNGNTKVG 386

Query: 587 EYIPWIRS 610
            YI WI S
Sbjct: 387 SYIDWIVS 394


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -1

Query: 498 PTSYMRGPPESPLHASSPGLPP 433
           P +  RG P +P     PG PP
Sbjct: 31  PQAPQRGSPPNPSQGPPPGGPP 52


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = +2

Query: 269 AGWGMYKQFISGTGLSSTVKQHVKLPYVDRDRCQAAQRTLRGGEA 403
           AG+   +  I G       +  +KLP   R     A +TL+ G A
Sbjct: 630 AGYITIEAIIGGGEFGDVCRGKLKLPPDGRTEIDVAIKTLKPGSA 674


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +2

Query: 119 DYIPNDVQGRHDIALIRLMVTAPYTDF 199
           D++PN    +H+   + L    PY ++
Sbjct: 119 DFVPNHTSDQHEWFQLSLKNIEPYNNY 145


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 81  TGCAQSLVPFMQSGP 37
           +GC Q LVP +Q  P
Sbjct: 293 SGCLQFLVPMLQGFP 307


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 81  TGCAQSLVPFMQSGP 37
           +GC Q LVP +Q  P
Sbjct: 261 SGCLQFLVPMLQGFP 275


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +2

Query: 119 DYIPNDVQGRHDIALIRLMVTAPYTDF 199
           D++PN    +H+   + L    PY ++
Sbjct: 119 DFVPNHTSDQHEWFQLSLKNIEPYNNY 145


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,908
Number of Sequences: 438
Number of extensions: 5666
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)