Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_B15
(577 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42678| Best HMM Match : Helicase_C (HMM E-Value=1.4e-24) 29 2.7
SB_59359| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_58940| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_58638| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_56745| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_49627| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_29334| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_5518| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_32294| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_31685| Best HMM Match : DUF1540 (HMM E-Value=3.6) 28 6.3
SB_29387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_15958| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_2989| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
>SB_42678| Best HMM Match : Helicase_C (HMM E-Value=1.4e-24)
Length = 1058
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +1
Query: 415 RF*DPTTCQLREFLPAESLHSRIACRRKRDRQRVHGKLVYSR 540
RF PT +++E +PA S+ + CR + ++ +L++S+
Sbjct: 175 RFIFPTIDKVKETIPARSVEQVVCCRLTALQTAIYKRLIHSK 216
>SB_59359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 523 FRGLFDDHAFSCRQFVNEVIQQEEIL 446
+ G D H SCRQ+ +I+Q+++L
Sbjct: 13 YDGTLDAHRKSCRQYQTVIIKQQKVL 38
>SB_58940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 523 FRGLFDDHAFSCRQFVNEVIQQEEIL 446
+ G D H SCRQ+ +I+Q+++L
Sbjct: 32 YDGTLDAHRKSCRQYQTVIIKQQKVL 57
>SB_58638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 523 FRGLFDDHAFSCRQFVNEVIQQEEIL 446
+ G D H SCRQ+ +I+Q+++L
Sbjct: 13 YDGTLDAHRKSCRQYQTVIIKQQKVL 38
>SB_56745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 523 FRGLFDDHAFSCRQFVNEVIQQEEIL 446
+ G D H SCRQ+ +I+Q+++L
Sbjct: 13 YDGTLDAHRKSCRQYQTVIIKQQKVL 38
>SB_49627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 523 FRGLFDDHAFSCRQFVNEVIQQEEIL 446
+ G D H SCRQ+ +I+Q+++L
Sbjct: 13 YDGTLDAHRKSCRQYQTVIIKQQKVL 38
>SB_29334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 523 FRGLFDDHAFSCRQFVNEVIQQEEIL 446
+ G D H SCRQ+ +I+Q+++L
Sbjct: 23 YDGTLDAHRKSCRQYQTVIIKQQKVL 48
>SB_5518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 523 FRGLFDDHAFSCRQFVNEVIQQEEIL 446
+ G D H SCRQ+ +I+Q+++L
Sbjct: 32 YDGTLDAHRKSCRQYQTVIIKQQKVL 57
>SB_32294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 523 FRGLFDDHAFSCRQFVNEVIQQEEIL 446
+ G D H SCRQ+ +I+Q+++L
Sbjct: 13 YDGTLDAHRKSCRQYQTVIIKQQKVL 38
>SB_31685| Best HMM Match : DUF1540 (HMM E-Value=3.6)
Length = 785
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 523 FRGLFDDHAFSCRQFVNEVIQQEEIL 446
+ G D H SCRQ+ +I+Q+++L
Sbjct: 110 YDGTLDAHRKSCRQYQTVIIKQQKVL 135
>SB_29387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 523 FRGLFDDHAFSCRQFVNEVIQQEEIL 446
+ G D H SCRQ+ +I+Q+++L
Sbjct: 32 YDGTLDAHRKSCRQYQTVIIKQQKVL 57
>SB_15958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 523 FRGLFDDHAFSCRQFVNEVIQQEEIL 446
+ G D H SCRQ+ +I+Q+++L
Sbjct: 13 YDGTLDAHRKSCRQYQTVIIKQQKVL 38
>SB_2989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 523 FRGLFDDHAFSCRQFVNEVIQQEEIL 446
+ G D H SCRQ+ +I+Q+++L
Sbjct: 13 YDGTLDAHRKSCRQYQTVIIKQQKVL 38
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,065,536
Number of Sequences: 59808
Number of extensions: 298014
Number of successful extensions: 595
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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