Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_B14
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin pro...   103   1e-22
AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin (...   103   1e-22
Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical pr...    38   0.005
AF038609-2|AAK29794.1|  226|Caenorhabditis elegans Hypothetical ...    30   1.4  
Z82083-6|CAB04974.1|  388|Caenorhabditis elegans Hypothetical pr...    28   5.8  

>L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin
           protein.
          Length = 264

 Score =  103 bits (246), Expect = 1e-22
 Identities = 49/103 (47%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
 Frame = +1

Query: 1   LAERRELTPHYLRMER---EAESNLTRRWTNAAIWKWCDLDAHDNDRFVSRHELFPIRAP 171
           L +RREL  H L  E    EAE++  ++     IWK+C+LD   +D+ VS HEL PI AP
Sbjct: 164 LKKRREL--HKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITAP 221

Query: 172 LMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELEDRC 300
           ++ +E CI PFL+ CDA+ D  I++ EWGKCL L E E+++RC
Sbjct: 222 VIPMESCIKPFLEGCDANNDGNISIKEWGKCLGLKEGEIQERC 264


>AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin
           (sparc) related protein1 protein.
          Length = 264

 Score =  103 bits (246), Expect = 1e-22
 Identities = 49/103 (47%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
 Frame = +1

Query: 1   LAERRELTPHYLRMER---EAESNLTRRWTNAAIWKWCDLDAHDNDRFVSRHELFPIRAP 171
           L +RREL  H L  E    EAE++  ++     IWK+C+LD   +D+ VS HEL PI AP
Sbjct: 164 LKKRREL--HKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITAP 221

Query: 172 LMSLEHCIAPFLDQCDADEDHRITLAEWGKCLQLDEYELEDRC 300
           ++ +E CI PFL+ CDA+ D  I++ EWGKCL L E E+++RC
Sbjct: 222 VIPMESCIKPFLEGCDANNDGNISIKEWGKCLGLKEGEIQERC 264


>Z72513-1|CAA96669.1|  260|Caenorhabditis elegans Hypothetical
           protein T04F3.2 protein.
          Length = 260

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
 Frame = +1

Query: 61  NLTRRWTNAAI-WKWCDLDAHDNDRFVSRHELFPIRAPLM---SLEHCIAPFLDQCDADE 228
           N T+   ++AI WK+  L+ + N+  + R E  P ++ L+   ++  C       CD ++
Sbjct: 164 NATKVSRDSAIRWKFNQLNINHNN-VLERSEWKPFKSVLLEWKNVRQCSRNLFKTCDLNK 222

Query: 229 DHRITLAEWGKCL 267
           D ++T  EW KC+
Sbjct: 223 DRKLTFDEWRKCI 235


>AF038609-2|AAK29794.1|  226|Caenorhabditis elegans Hypothetical
           protein C54E4.2a protein.
          Length = 226

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
 Frame = +1

Query: 94  WKWCDLDAHDNDRFVSRHELFPIRAPLMSLEHCIAPFLDQC-DADEDHRITLAEWGKCLQ 270
           W +   D + + + +S+ EL PI       E C+  F+D C D   D  I++ EW  C  
Sbjct: 83  WMFNQWDGNQDGK-LSKAELRPIERG--GNEACVEEFIDMCDDMVVDGSISVDEWCDCFT 139

Query: 271 L-DEYELEDRCDEFIDDL 321
             D+   E  C +   D+
Sbjct: 140 FSDDLRHEPPCHKAKHDV 157


>Z82083-6|CAB04974.1|  388|Caenorhabditis elegans Hypothetical
           protein ZK1010.8 protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 415 NSKSKLQSHVIKSEWRYVEPNIIVEFSKHHATSHR*IRRSGPP 287
           +S+ + ++HV K    Y++PN      KHH  SH   R   PP
Sbjct: 184 HSRRRRRNHVSKI---YLDPNDARRHQKHHHRSHSYSRPVAPP 223


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,175,495
Number of Sequences: 27780
Number of extensions: 215220
Number of successful extensions: 537
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)