BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0001_B14 (598 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.3 AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 1.7 AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 1.7 AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 1.7 AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 1.7 AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 1.7 AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 1.7 AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 1.7 AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 1.7 AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 1.7 AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 1.7 AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 4.0 AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 4.0 AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 4.0 AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 4.0 DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 5.3 AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 5.3 AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 5.3 AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 5.3 AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 5.3 AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 5.3 AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 9.2 AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 21 9.2 >AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex determiner protein. Length = 428 Score = 23.8 bits (49), Expect = 1.3 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRR 9 GN S + S S SR+H FQ + R R S SR R + RR Sbjct: 204 GNESKKYATSSNSLRSRTHDFQHTS--SRYSRERSCSRDRNREYKEKDRR 251 >AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex determiner protein. Length = 400 Score = 23.4 bits (48), Expect = 1.7 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRR 9 GN S + S S SR+H FQ + R R S SR R + RR Sbjct: 193 GNESKKYATSSNSLRSRTHGFQHTS--SRYSRERSCSRDRNREYKEKDRR 240 >AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex determiner protein. Length = 406 Score = 23.4 bits (48), Expect = 1.7 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRR 9 GN S + S S SR+H FQ + R R S SR R + RR Sbjct: 204 GNESKKYATSSNSLRSRTHGFQHTS--SRYSRERSCSRDRNREYRKKDRR 251 >AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 23.4 bits (48), Expect = 1.7 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRR 9 GN S + S S SR+H FQ + R R S SR R + RR Sbjct: 204 GNESKKYATSSNSLRSRTHGFQHTSSHYSRER--SCSRDRNREYRKKDRR 251 >AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 23.4 bits (48), Expect = 1.7 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRR 9 GN S + S S SR+H FQ + R R S SR R + RR Sbjct: 204 GNESKKYATSSNSLRSRTHGFQHTSSHYSRER--SCSRDRNREYRKKDRR 251 >AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 23.4 bits (48), Expect = 1.7 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRR 9 GN S + S S SR+H FQ + R R S SR R + RR Sbjct: 204 GNESKKYATSSNSLRSRTHGFQHTSSHYSRER--SCSRDRNREYRKKDRR 251 >AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 23.4 bits (48), Expect = 1.7 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRR 9 GN S + S S SR+H FQ + R R S SR R + RR Sbjct: 204 GNESKKYATSSNSLRSRTHGFQHTSSHYSRER--SCSRDRNREYRKKDRR 251 >AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 23.4 bits (48), Expect = 1.7 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRR 9 GN S + S S SR+H FQ + R R S SR R + RR Sbjct: 193 GNESKKYATSSNSLRSRTHGFQHTSSHYSRER--SCSRDRNREYRKKDRR 240 >AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex determiner protein. Length = 419 Score = 23.4 bits (48), Expect = 1.7 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRR 9 GN S + S S SR+H FQ + R R S SR R + RR Sbjct: 204 GNESKKYATSSNSLRSRTHGFQHTSSHYSRER--SCSRDRNREYKEKDRR 251 >AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex determiner protein. Length = 426 Score = 23.4 bits (48), Expect = 1.7 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRR 9 GN S + S S SR+H FQ + R R S SR R + RR Sbjct: 204 GNESKKYATSSNSLRSRTHGFQHTS--SRYSRERSCSRDRNREYKEKDRR 251 >AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex determiner protein. Length = 425 Score = 23.4 bits (48), Expect = 1.7 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRR 9 GN S + S S SR+H FQ + R R S SR R + RR Sbjct: 204 GNESKKYATSSNSLRSRTHGFQHTS--SRYSRERSCSRDRNREYRKKDRR 251 >AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex determiner protein. Length = 413 Score = 22.2 bits (45), Expect = 4.0 Identities = 17/50 (34%), Positives = 22/50 (44%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRR 9 GN S + S S +R+H FQ + R R S SR R + RR Sbjct: 204 GNESKKYATSSNSLRNRTHGFQHTS--SRYSRERSCSRDRNREYRKKDRR 251 >AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex determiner protein. Length = 418 Score = 22.2 bits (45), Expect = 4.0 Identities = 17/50 (34%), Positives = 22/50 (44%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRR 9 GN S + S S +R+H FQ + R R S SR R + RR Sbjct: 209 GNESKKYATSSNSLRNRTHGFQHTS--SRYSRERSCSRDRNREYRKKDRR 256 >AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex determiner protein. Length = 385 Score = 22.2 bits (45), Expect = 4.0 Identities = 17/50 (34%), Positives = 22/50 (44%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRR 9 GN S + S S +R+H FQ + R R S SR R + RR Sbjct: 204 GNESKKYATSSNSLRNRTHGFQHTS--SRYSRERSCSRDRNREYKKKDRR 251 >AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex determiner protein. Length = 410 Score = 22.2 bits (45), Expect = 4.0 Identities = 17/50 (34%), Positives = 22/50 (44%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRSMRR*WGVSSRR 9 GN S + S S +R+H FQ + R R S SR R + RR Sbjct: 204 GNESKKYATSSNSLRNRTHGFQHTS--SRYSRERSCSRDRNREYREKDRR 251 >DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine receptor alpha1subunit protein. Length = 601 Score = 21.8 bits (44), Expect = 5.3 Identities = 9/36 (25%), Positives = 20/36 (55%) Frame = -1 Query: 469 ICHRFEQTVKIDKIFFLLNSKSKLQSHVIKSEWRYV 362 + E+T+ D F ++K+K + ++ +W+YV Sbjct: 508 LVREIEKTID-DARFIAQHAKNKDKFESVEEDWKYV 542 >AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 21.8 bits (44), Expect = 5.3 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRS 42 GN S + S S SR+H FQ + R R S R+ Sbjct: 193 GNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRN 231 >AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 21.8 bits (44), Expect = 5.3 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRS 42 GN S + S S SR+H FQ + R R S R+ Sbjct: 204 GNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRN 242 >AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 21.8 bits (44), Expect = 5.3 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRS 42 GN S + S S SR+H FQ + R R S R+ Sbjct: 204 GNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRN 242 >AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 21.8 bits (44), Expect = 5.3 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRS 42 GN S + S S SR+H FQ + R R S R+ Sbjct: 204 GNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRN 242 >AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex determiner protein. Length = 414 Score = 21.8 bits (44), Expect = 5.3 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRS 42 GN S + S S SR+H FQ + R R S R+ Sbjct: 204 GNESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRN 242 >AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex determiner protein. Length = 406 Score = 21.0 bits (42), Expect = 9.2 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = -3 Query: 158 GNNSCRDTNLSLSCASRSHHFQMAALVQRRVRLDSASRS 42 GN S + S S +R+H FQ + R R S R+ Sbjct: 204 GNESKKYATSSNSLRNRTHDFQHTSSRYSRERRCSRDRN 242 >AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C protein. Length = 149 Score = 21.0 bits (42), Expect = 9.2 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +1 Query: 205 LDQCDADEDHRITLAEWGKC 264 LD D+D I +A++G C Sbjct: 113 LDNVLLDQDGHIKIADFGMC 132 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 136,327 Number of Sequences: 438 Number of extensions: 2639 Number of successful extensions: 25 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 25 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 17482179 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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