Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_B11
(243 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 25 1.4
SPBC1778.02 |rap1||telomere binding protein Rap1|Schizosaccharom... 25 1.9
SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn... 25 1.9
SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces ... 24 3.2
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 24 3.2
SPBC3B8.02 |php5||CCAAT-binding factor complex subunit Php5|Schi... 24 3.2
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 24 3.2
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 23 4.3
SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr ... 23 4.3
SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory... 23 4.3
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 23 4.3
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 23 4.3
SPAC2F7.02c |||phosphoprotein phosphatase|Schizosaccharomyces po... 23 4.3
SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1 |Sc... 23 4.3
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 23 5.6
SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase |Schizo... 23 5.6
SPCC1235.11 |||conserved eukaryotic protein|Schizosaccharomyces ... 23 7.5
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 23 7.5
SPBP23A10.16 |sdh4|tim18|TIM22 inner membrane protein import com... 23 7.5
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 23 7.5
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 22 9.9
SPCC757.08 |||exosome subunit Rrp45 |Schizosaccharomyces pombe|c... 22 9.9
SPBC365.13c |hba1|caf1|Ran GTPase binding protein Hba1|Schizosac... 22 9.9
SPBC17G9.12c |||conserved fungal protein|Schizosaccharomyces pom... 22 9.9
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 22 9.9
SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein Rrp12|Sch... 22 9.9
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 25.0 bits (52), Expect = 1.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 87 YLCSVHFYGRRFENETNDSVRAGDE 161
YLCSVH + E ETN+ + D+
Sbjct: 63 YLCSVHEAKKWLEEETNNEYQNLDD 87
>SPBC1778.02 |rap1||telomere binding protein
Rap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 693
Score = 24.6 bits (51), Expect = 1.9
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Frame = -2
Query: 206 TFTVS--SSVLFCISRNF--VSG-TNTVICF 129
TFT S SS+LF +S+NF + G N + CF
Sbjct: 4 TFTKSDGSSILFAVSKNFEHIRGFKNAIDCF 34
>SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate
synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 534
Score = 24.6 bits (51), Expect = 1.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 13 ASSDPLKMHRALRIIKTNTDISGDYTCVVSTFMDEDS 123
A+S+ K A KTN D+ D + +V+ F+ DS
Sbjct: 247 ANSENNKGSEAGVSAKTNPDMDSDSSAIVNEFLKPDS 283
>SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 862
Score = 23.8 bits (49), Expect = 3.2
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = +1
Query: 49 RIIKTNTDISGDYTCVVSTFMDE 117
R+ + N+D++G ++ + F+DE
Sbjct: 378 RLARKNSDVAGSFSDIKPVFVDE 400
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 23.8 bits (49), Expect = 3.2
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 142 VFVPETKFRLIQNKTDDDTVNVICAAEGVYP 234
+F+PE+ LIQ D++ V V+ + ++P
Sbjct: 201 LFLPESPRYLIQVGKDEEAVRVLSESAELFP 231
>SPBC3B8.02 |php5||CCAAT-binding factor complex subunit
Php5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 415
Score = 23.8 bits (49), Expect = 3.2
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 97 VSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVNVICAAEGVY 231
+ T +D K T+ +P + + + KTDDD N + +AE +
Sbjct: 94 IDTLEHDDQAVK--TLHLPLARIKKVM-KTDDDVKNKMISAEAPF 135
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 23.8 bits (49), Expect = 3.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 61 TNTDISGDYTCVVSTFMDED 120
T+T +S D + + STF+D D
Sbjct: 597 TSTVLSNDSSAISSTFLDRD 616
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 23.4 bits (48), Expect = 4.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 106 FMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVNVICAAEG 225
FMD + ++ V + T L TDDD ++ A+G
Sbjct: 56 FMDTRADEQERGVTIKSTAISLFAEMTDDDMKDMKEPADG 95
>SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1237
Score = 23.4 bits (48), Expect = 4.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 194 SSSVLFCISRNFVSGTNTVICFVF 123
+SS F +RN +SG+N V+ F F
Sbjct: 733 NSSSWFSKARNILSGSNEVLPFRF 756
>SPCC550.13 |dfp1|rad35, him1|Hsk1-Dfp1 kinase complex regulatory
subunit Dfp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 545
Score = 23.4 bits (48), Expect = 4.3
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 145 FVPETKFRLIQNKT 186
FVPETK+RL +K+
Sbjct: 323 FVPETKYRLSTSKS 336
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 23.4 bits (48), Expect = 4.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 105 FYGRRFENETNDSVRAGDEVPADTE*D 185
FY FEN+ D+ DE D E D
Sbjct: 9 FYEEEFENDLLDASEFEDEFDEDAEID 35
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 23.4 bits (48), Expect = 4.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 106 FMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVNVICAAEG 225
FMD + ++ V + T L TDDD ++ A+G
Sbjct: 56 FMDTRADEQERGVTIKSTAISLFAEMTDDDMKDMKEPADG 95
>SPAC2F7.02c |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 325
Score = 23.4 bits (48), Expect = 4.3
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = -1
Query: 240 RRGIHSF-RRTDDVHRVII---RLILYQPELRLRHEHCHLFRFRIFVHKSGHYTSIITRD 73
R G+ F ++ D+ +++ L Y + +H H+ R R+F +Y +D
Sbjct: 199 RPGVDEFLKKMGDMFEIVVFTASLAKYADPVLDMLDHSHVIRHRLFREACCNYEGNFVKD 258
Query: 72 IS 67
+S
Sbjct: 259 LS 260
>SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 23.4 bits (48), Expect = 4.3
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 40 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNK 183
+AL+IIK N+ I DY + S K +V + +I K
Sbjct: 628 QALKIIKDNSKIRKDYRSIQSITSRNKVSLKGASVDISSKDKEIISQK 675
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 23.0 bits (47), Expect = 5.6
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 183 LILYQPELRLRHEHCHLFRFRIFVHKSGHYTSIITRDISVRFNN 52
LIL +P L +L I H+ G T +IT D+S + NN
Sbjct: 592 LILDEPTSALDPITKNLVMDAIRAHRKGKTTLVITHDMS-QINN 634
>SPACUNK4.16c |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 23.0 bits (47), Expect = 5.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 1 LTYRASSDPLKMHRALRIIKTNTDISGDY 87
L R S D + H +L + T+TD G Y
Sbjct: 245 LKERISHDYITEHSSLVVYPTDTDFVGHY 273
>SPCC1235.11 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 141
Score = 22.6 bits (46), Expect = 7.5
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 87 YLCSVHFYG 113
YLCS HF+G
Sbjct: 31 YLCSTHFWG 39
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1254
Score = 22.6 bits (46), Expect = 7.5
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 112 DEDSKTKQMTVFVPETKFRLIQNKTDDDTVN 204
D +KTKQ T+F +K ++ + D T++
Sbjct: 15 DSSAKTKQKTLFGFFSKIPNVKQEKSDSTLS 45
Score = 22.6 bits (46), Expect = 7.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 234 GIHSFRRTDDVHRVIIRLILYQ 169
G H TDD+HR + +L Q
Sbjct: 530 GFHMCEFTDDIHRTKLDTLLTQ 551
>SPBP23A10.16 |sdh4|tim18|TIM22 inner membrane protein import
complex anchor subunit Tim18|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 186
Score = 22.6 bits (46), Expect = 7.5
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 172 SAGTSSPARTLSFVSFSN 119
SA T+SP T SF F+N
Sbjct: 9 SANTNSPTTTTSFSWFTN 26
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 22.6 bits (46), Expect = 7.5
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +1
Query: 142 VFVPETKFRLIQNKTDDDTVNVIC 213
+F+PE+ LI DD+ + ++C
Sbjct: 167 IFLPESPRYLIAIGKDDEALKIMC 190
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 22.2 bits (45), Expect = 9.9
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 120 FENETNDSVRAGDEVPA 170
++NET + R G++VP+
Sbjct: 161 YKNETKSNQRLGEDVPS 177
>SPCC757.08 |||exosome subunit Rrp45 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 291
Score = 22.2 bits (45), Expect = 9.9
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = +1
Query: 7 YRASSDPLKMHRALRIIKTNTDISGDYTCVVSTFMDEDSKTKQ 135
Y+A + + + KT DI+ V+ +DED + K+
Sbjct: 236 YKAGGIIIDPSKIISCAKTAFDIAVSVCSVIQQALDEDLRKKE 278
>SPBC365.13c |hba1|caf1|Ran GTPase binding protein
Hba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 399
Score = 22.2 bits (45), Expect = 9.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 216 RTDDVHRVIIRLILYQ 169
R D VHRVI+ + L+Q
Sbjct: 321 RNDAVHRVIMNVPLFQ 336
>SPBC17G9.12c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 22.2 bits (45), Expect = 9.9
Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +1
Query: 64 NTDISGDYTCVVSTFMDEDSKTKQMT-VFVPETKFRLIQNKTD 189
+TD++ D CV + D D+ T + L+ N TD
Sbjct: 139 HTDLTADLLCVHANDFDFDTSTNTTNGRILARNASSLLMNSTD 181
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 22.2 bits (45), Expect = 9.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 144 HCHLFRFR 121
HCH FRFR
Sbjct: 118 HCHRFRFR 125
>SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein
Rrp12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1001
Score = 22.2 bits (45), Expect = 9.9
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 82 DYTCVVSTFMDEDS-KTKQMTVFVPETKFRLIQNKTDDDTVNVI 210
+Y ++S + DS K T+F F + DDD VN +
Sbjct: 792 EYISMISANLMNDSLNLKVSTIFALTRIFYEFSDYIDDDYVNAV 835
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.131 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 903,709
Number of Sequences: 5004
Number of extensions: 15927
Number of successful extensions: 61
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 2,362,478
effective HSP length: 59
effective length of database: 2,067,242
effective search space used: 43412082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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