Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_B11
(243 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50799| Best HMM Match : I-set (HMM E-Value=0) 33 0.027
SB_29237| Best HMM Match : I-set (HMM E-Value=0) 33 0.047
SB_3465| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.062
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.083
SB_27122| Best HMM Match : I-set (HMM E-Value=1.9e-39) 30 0.25
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.44
SB_36553| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.58
SB_19226| Best HMM Match : I-set (HMM E-Value=0) 29 0.58
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.0
SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10) 27 1.8
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 27 1.8
SB_28651| Best HMM Match : ig (HMM E-Value=1.4e-09) 27 1.8
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 27 1.8
SB_10606| Best HMM Match : I-set (HMM E-Value=0) 27 2.3
SB_58150| Best HMM Match : ig (HMM E-Value=3.7e-24) 27 3.1
SB_29818| Best HMM Match : zf-AD (HMM E-Value=1.3) 27 3.1
SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47) 27 3.1
SB_26427| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1
SB_21023| Best HMM Match : I-set (HMM E-Value=2e-07) 26 4.1
SB_9202| Best HMM Match : ig (HMM E-Value=5e-40) 26 5.4
SB_47305| Best HMM Match : I-set (HMM E-Value=0) 26 5.4
SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0) 25 7.2
SB_42485| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 25 7.2
SB_37927| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.2
SB_33884| Best HMM Match : I-set (HMM E-Value=7e-08) 25 7.2
SB_31717| Best HMM Match : I-set (HMM E-Value=2.9e-10) 25 7.2
SB_18619| Best HMM Match : I-set (HMM E-Value=7.8e-08) 25 7.2
SB_46724| Best HMM Match : I-set (HMM E-Value=6.1e-11) 25 7.2
SB_44178| Best HMM Match : I-set (HMM E-Value=0.52) 25 7.2
SB_19973| Best HMM Match : I-set (HMM E-Value=2.8e-08) 25 7.2
SB_3122| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.2
SB_3034| Best HMM Match : I-set (HMM E-Value=5e-09) 25 7.2
SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5
>SB_50799| Best HMM Match : I-set (HMM E-Value=0)
Length = 1195
Score = 33.5 bits (73), Expect = 0.027
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 37 HRALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKT 186
++ L I +T SG+YTC+ S S KQ+ + VP + F + NKT
Sbjct: 492 NKTLVIFQTEYRDSGNYTCIASNRAGNTSLAKQVDIQVPASVF--VDNKT 539
>SB_29237| Best HMM Match : I-set (HMM E-Value=0)
Length = 869
Score = 32.7 bits (71), Expect = 0.047
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = +1
Query: 43 ALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVNVI--CA 216
ALR KT + SG++TC S + S+T Q+ + P ++ + + V+ CA
Sbjct: 370 ALRNNKTAMEDSGNFTCTASNTAGKKSQTVQIIISQPPVLTEEPKDMQAMEGLKVVLKCA 429
Query: 217 AEGVYP 234
A+GV P
Sbjct: 430 AKGVPP 435
Score = 28.7 bits (61), Expect = 0.77
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = +1
Query: 76 SGDYTCVVSTFMD-EDSKTKQMTVFVPETK-FRLIQNKT---DDDTVNVICAAEGVYPAP 240
SG+YTC+ F+ +S +M+V V F++ + T DT+ + C+A G P P
Sbjct: 198 SGNYTCIAQNFLGVRESPAFKMSVIVASVPVFQVRPSDTIAVVGDTITLYCSATGT-PKP 256
Query: 241 N 243
+
Sbjct: 257 D 257
>SB_3465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 32.3 bits (70), Expect = 0.062
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTV-FVPETKFRLIQNKT-DDDTVNVICAAEGVYPAP 240
+G YTC + M D+ T Q+TV + PE I + D +++ C A GV P P
Sbjct: 60 AGTYTCTATNAMGSDTTTVQVTVNYKPEMVSSTINTSSWDRKVLSLQCKARGV-PLP 115
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 31.9 bits (69), Expect = 0.083
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFM-DEDSKTK-QMTVFV-PETKFRLIQNK-TDDDTVNVIC 213
L I T D GDYTC+V + +SKTK ++ F PE + +L K + + V +
Sbjct: 648 LTIKTTRADDQGDYTCIVRNELGSAESKTKLKVIAFARPEFRTKLKPVKAVEGEEVQLDV 707
Query: 214 AAEGVYPAPN 243
EG YP P+
Sbjct: 708 KVEG-YPKPD 716
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMT----VFVPETKFRL 171
L +T + GDYTCV S E S + + +PE K RL
Sbjct: 3197 LTFYETQPEDEGDYTCVASNEAGEASSHASLVLSKPLVMPEFKERL 3242
>SB_27122| Best HMM Match : I-set (HMM E-Value=1.9e-39)
Length = 378
Score = 30.3 bits (65), Expect = 0.25
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTV-FVPETKFRLIQNKT-DDDTVNVICAAEGVYPAP 240
+G YTC + M D+ T Q+TV + PE + D + +++ C GV P+P
Sbjct: 263 AGTYTCTATNAMGSDTTTVQVTVNYKPEMVSSTTNTSSWDRNVLSLQCKVRGV-PSP 318
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVN-------VICAAEGVYP 234
+G Y C + +++TK + +V I +K+ D TVN + C ++G YP
Sbjct: 176 TGQYVCTAVNIVSGNTQTKTASTYVIVKYKPSILSKSPDQTVNETTGSLKLTCISDG-YP 234
Query: 235 AP 240
+P
Sbjct: 235 SP 236
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 29.5 bits (63), Expect = 0.44
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Frame = +1
Query: 73 ISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDT------VNVICAAEGVYP 234
++G Y CV S+ ED + + V K + N T DT V V C+++ YP
Sbjct: 335 MAGTYVCVASSIYGEDRNSTILIVLYAPVKVNVHFNTTSRDTAVHGESVTVTCSSQ-AYP 393
Query: 235 A 237
A
Sbjct: 394 A 394
>SB_36553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 29.1 bits (62), Expect = 0.58
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTV-FVPETKFRLIQNKT-DDDTVNVICAAEGVYPAP 240
+G YTC + M D+ T Q+TV + PE + D +++ C A GV P P
Sbjct: 239 AGTYTCTATNEMMSDATTVQVTVNYKPEMVSSTTNTSSWDRKVLSLQCKARGV-PLP 294
Score = 25.0 bits (52), Expect = 9.5
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVN-------VICAAEGVYP 234
+G Y C + +++T+ + +V I +K+ D TVN + C ++G YP
Sbjct: 152 TGQYVCTAVNTVTGNTQTRTASTYVMVKYKPSILSKSPDQTVNETTGFLKLTCISDG-YP 210
Query: 235 AP 240
P
Sbjct: 211 TP 212
>SB_19226| Best HMM Match : I-set (HMM E-Value=0)
Length = 1500
Score = 29.1 bits (62), Expect = 0.58
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTVFVPE--TKFRLIQNKTDDDTVNVICAAEGVYPAP 240
SG+Y CV S + ++ V P T FR DT+++ C A+G +P P
Sbjct: 730 SGEYKCVASNAAGSAEQVIKVYVRGPPNITSFRSSVTGVQGDTISLPCRAKG-FPPP 785
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 28.3 bits (60), Expect = 1.0
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 58 KTNTDISGDYTCVVSTFMDE-DSKTKQMTVFV-PE-TKFRLIQNKTDDDTVNVICAAEGV 228
K + D G Y C+ + + S Q+ VF P+ + + Q T+ + V ++C AEG
Sbjct: 1013 KISRDDHGQYYCLANNSVSNVTSSIAQLNVFFKPDISTYPSPQTITEGENVTLLCVAEG- 1071
Query: 229 YPAPN 243
P+P+
Sbjct: 1072 RPSPS 1076
>SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)
Length = 968
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTV-FVPETKFRLIQNK-TDDDTVNVICAAEGVYPAP 240
+G YTC + M D+ T Q+TV + PE + +++ C A GV P+P
Sbjct: 60 AGTYTCTATNEMGSDTTTVQVTVNYKPEIVSSTTNTSFWNKKILSLQCKARGV-PSP 115
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTV 144
L I+ T D G+YTC+ + E S T ++ V
Sbjct: 3021 LTIMNTTLDDEGEYTCIAKNKVGEVSCTAELLV 3053
Score = 25.8 bits (54), Expect = 5.4
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 31 KMHRALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTV---FVPETKFRLIQN 180
K L II + G+YTCV ++ +DS + ++ V VP R I N
Sbjct: 3112 KDRSVLTIIDAKLNDEGEYTCVATSKAGKDSCSVELLVDEAVVPPEFVRKISN 3164
>SB_28651| Best HMM Match : ig (HMM E-Value=1.4e-09)
Length = 221
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTV-FVPETKFRLIQNK-TDDDTVNVICAAEGVYPAP 240
+G YTC + M D+ T Q+TV + PE + +++ C A GV P+P
Sbjct: 60 AGTYTCTATNEMGSDTTTVQVTVNYKPEIVSSTTNTSFWNKKILSLQCKARGV-PSP 115
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 27.5 bits (58), Expect = 1.8
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 43 ALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETK 162
+L IIK + SG+YTC + + + S++ + V P+ K
Sbjct: 2474 SLVIIKVTKEDSGNYTCQAVSSLGKASQSFDLKVEAPKVK 2513
>SB_10606| Best HMM Match : I-set (HMM E-Value=0)
Length = 872
Score = 27.1 bits (57), Expect = 2.3
Identities = 10/37 (27%), Positives = 18/37 (48%)
Frame = +1
Query: 43 ALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVP 153
+L I+ + + SG+Y C + EDS + + P
Sbjct: 284 SLVIVNSRSSDSGEYVCTARNLLGEDSAVSTVNILNP 320
>SB_58150| Best HMM Match : ig (HMM E-Value=3.7e-24)
Length = 456
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVNV 207
SG+ +C V+ D KT +TV P F N +D+ V++
Sbjct: 87 SGEVSCTVTNLRGSDKKTSSITVLEP---FAPSINTSDETVVSL 127
>SB_29818| Best HMM Match : zf-AD (HMM E-Value=1.3)
Length = 275
Score = 26.6 bits (56), Expect = 3.1
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 105 FYGRRFENETNDSVRAG--DEVPADTE*DG**HGERHLCGGRSV 230
+ GRR E D V G +VP + + G H E+ +C GR V
Sbjct: 199 YLGRRDRREIEDYVLEGRKKDVPCEWDISG--HKEKEMCEGRMV 240
>SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47)
Length = 626
Score = 26.6 bits (56), Expect = 3.1
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 52 IIKTNT-DISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRL-IQNKTDDDTVNVICAAEG 225
++ T + D G+ +C+ S D+ S + + P+ L + N DDD + G
Sbjct: 412 VVSTKSLDFDGNLSCMYSADNDDYSPSS----YKPDRLLNLSVPNDYDDDFNTYLTGPTG 467
Query: 226 VYPAPN 243
PAPN
Sbjct: 468 ETPAPN 473
>SB_26427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTVFVP 153
+G YTC + M D+ T Q+TV P
Sbjct: 229 AGTYTCTATNEMGSDATTVQVTVNCP 254
>SB_21023| Best HMM Match : I-set (HMM E-Value=2e-07)
Length = 175
Score = 26.2 bits (55), Expect = 4.1
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVN-------VICAAEGVYP 234
+G Y C + +++T+ + +V I +K+ D TVN + C ++G YP
Sbjct: 91 TGQYVCTAVNTVTGNTQTRTASTYVMVKYKPSILSKSPDQTVNETTGSLKLTCNSDG-YP 149
Query: 235 AP 240
AP
Sbjct: 150 AP 151
>SB_9202| Best HMM Match : ig (HMM E-Value=5e-40)
Length = 1604
Score = 25.8 bits (54), Expect = 5.4
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = +1
Query: 40 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDTV-----N 204
R L + + D +G+YTCV + + ++ + V T L D+ V
Sbjct: 487 RDLVVSRAKKDDAGNYTCVATNSQGVNQHSELLYVKHAPTITTLSTGAFDNGVVLNQRAT 546
Query: 205 VICAAEGVYPAP 240
+ C+A+G YP P
Sbjct: 547 LTCSADG-YPTP 557
>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
Length = 5832
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETK 162
L I + G Y CV S+ S+T ++V VP+ K
Sbjct: 3188 LVIYHVTPEDEGSYKCVASSTNGRSSRTFDLSVKVPKPK 3226
>SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0)
Length = 1291
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 150 HEHCHLFRFRIFVHKSGHY 94
H H H F +R+ H S HY
Sbjct: 1002 HYHYHPFHYRLLRHHSFHY 1020
>SB_42485| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1565
Score = 25.4 bits (53), Expect = 7.2
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 64 NTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKF-RLIQNKTDDDTVNVICAAEG 225
N SG Y CV + +D D T + V T F ++ N T ++NV+ A G
Sbjct: 707 NRGYSGTYKCVATNKLDTDFATGSLNVLGNVTGFLNVLGNVT--GSLNVLGNATG 759
>SB_37927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 25.4 bits (53), Expect = 7.2
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +1
Query: 28 LKMHRALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTD--DDTV 201
L + +L I + G Y+CV + S +TV VP T N T ++
Sbjct: 472 LHSNGSLSITRVLFSDRGSYSCVATNVAGSASSVATLTVQVPPTVSGRPTNATRIVGESH 531
Query: 202 NVICAAEGVYPAP 240
V C +G PAP
Sbjct: 532 TVTCQFQG-SPAP 543
>SB_33884| Best HMM Match : I-set (HMM E-Value=7e-08)
Length = 84
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTV 144
+G YTC + M D+ T Q+TV
Sbjct: 60 AGTYTCTATNEMGSDATTVQVTV 82
>SB_31717| Best HMM Match : I-set (HMM E-Value=2.9e-10)
Length = 84
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTV 144
+G YTC + M D+ T Q+TV
Sbjct: 60 AGTYTCTATNEMGSDTTTVQVTV 82
>SB_18619| Best HMM Match : I-set (HMM E-Value=7.8e-08)
Length = 92
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTV 144
+G YTC + M D+ T Q+TV
Sbjct: 68 AGTYTCTTTNEMGSDTTTVQVTV 90
>SB_46724| Best HMM Match : I-set (HMM E-Value=6.1e-11)
Length = 133
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTV 144
+G YTC + M D+ T Q+TV
Sbjct: 109 AGTYTCTATNEMGSDTTTVQVTV 131
>SB_44178| Best HMM Match : I-set (HMM E-Value=0.52)
Length = 46
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTV 144
+G YTC + M D+ T Q+TV
Sbjct: 22 AGTYTCTATNEMGSDATTVQVTV 44
>SB_19973| Best HMM Match : I-set (HMM E-Value=2.8e-08)
Length = 84
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTV 144
+G YTC + M D+ T Q+TV
Sbjct: 60 AGTYTCTATNEMGSDATTVQVTV 82
>SB_3122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1246
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 44 LYALLKRTLISLVIILV*CPLLWTKI 121
LYALLKR ++ V +L+ LL+T +
Sbjct: 431 LYALLKRIVVPFVGVLIVLMLLFTSM 456
>SB_3034| Best HMM Match : I-set (HMM E-Value=5e-09)
Length = 84
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 76 SGDYTCVVSTFMDEDSKTKQMTV 144
+G YTC + M D+ T Q+TV
Sbjct: 60 AGTYTCTATNEMGSDTTTVQVTV 82
>SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1143
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 112 DEDSKTKQMTVFVPETKFRLIQNKTDDDT 198
D+ S + + +P+ + +IQNKT DDT
Sbjct: 1053 DDSSSKENIHDDIPKPEVIVIQNKTFDDT 1081
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.131 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,752,959
Number of Sequences: 59808
Number of extensions: 119539
Number of successful extensions: 398
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 16,821,457
effective HSP length: 58
effective length of database: 13,352,593
effective search space used: 293757046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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