Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_B11
(243 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical pr... 33 0.027
U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical pr... 33 0.027
U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical pr... 33 0.027
AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobuli... 33 0.027
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 30 0.25
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 30 0.25
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 30 0.25
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 30 0.25
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 30 0.25
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 30 0.25
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 30 0.25
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 30 0.25
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 30 0.25
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 30 0.25
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 30 0.25
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 30 0.25
U42439-9|AAM98033.1| 294|Caenorhabditis elegans Hypothetical pr... 28 1.0
U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical pr... 28 1.0
U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical pr... 27 1.3
AF100306-9|ABB88216.1| 105|Caenorhabditis elegans Hypothetical ... 27 2.3
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 26 3.1
Z99283-3|CAB16538.1| 327|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z83112-1|CAB05538.1| 742|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z74041-8|CAA98519.2| 610|Caenorhabditis elegans Hypothetical pr... 25 7.1
DQ482732-1|ABF20555.1| 610|Caenorhabditis elegans SNF-11 protein. 25 7.1
AY529124-1|AAT02634.1| 610|Caenorhabditis elegans GABA transpor... 25 7.1
>U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical
protein F02G3.1c protein.
Length = 955
Score = 33.1 bits (72), Expect = 0.027
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +1
Query: 13 ASSDPLKMHRALRIIKT-NTDISGDYTCVVSTFMDEDSKTKQMTVFV-PETKFRLIQNKT 186
A SD + L II++ N++ +G Y CV + + + +T + VF+ P+ +
Sbjct: 286 ARSDKHNVEEGLLIIESLNSEDAGTYKCVANNTVGSNERTFDLAVFLKPKVDLKHEYVVK 345
Query: 187 DDDTVNVICAAEG 225
+ D V ++C+ G
Sbjct: 346 EGDDVELVCSYHG 358
Score = 27.1 bits (57), Expect = 1.8
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQ---NKTDDDTVNVICA 216
L I + + + DYTC VS +K Q+ + P T D +TV+V C
Sbjct: 469 LTIKSISLEDAADYTCAVSNDAGTVNKVTQVGIIHPPTLRHYTGPHIRSFDGNTVSVYCD 528
Query: 217 AEGVYPAP 240
V P+P
Sbjct: 529 VSAV-PSP 535
>U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical
protein F02G3.1b protein.
Length = 913
Score = 33.1 bits (72), Expect = 0.027
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +1
Query: 13 ASSDPLKMHRALRIIKT-NTDISGDYTCVVSTFMDEDSKTKQMTVFV-PETKFRLIQNKT 186
A SD + L II++ N++ +G Y CV + + + +T + VF+ P+ +
Sbjct: 259 ARSDKHNVEEGLLIIESLNSEDAGTYKCVANNTVGSNERTFDLAVFLKPKVDLKHEYVVK 318
Query: 187 DDDTVNVICAAEG 225
+ D V ++C+ G
Sbjct: 319 EGDDVELVCSYHG 331
Score = 27.1 bits (57), Expect = 1.8
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQ---NKTDDDTVNVICA 216
L I + + + DYTC VS +K Q+ + P T D +TV+V C
Sbjct: 442 LTIKSISLEDAADYTCAVSNDAGTVNKVTQVGIIHPPTLRHYTGPHIRSFDGNTVSVYCD 501
Query: 217 AEGVYPAP 240
V P+P
Sbjct: 502 VSAV-PSP 508
>U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical
protein F02G3.1a protein.
Length = 928
Score = 33.1 bits (72), Expect = 0.027
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +1
Query: 13 ASSDPLKMHRALRIIKT-NTDISGDYTCVVSTFMDEDSKTKQMTVFV-PETKFRLIQNKT 186
A SD + L II++ N++ +G Y CV + + + +T + VF+ P+ +
Sbjct: 259 ARSDKHNVEEGLLIIESLNSEDAGTYKCVANNTVGSNERTFDLAVFLKPKVDLKHEYVVK 318
Query: 187 DDDTVNVICAAEG 225
+ D V ++C+ G
Sbjct: 319 EGDDVELVCSYHG 331
Score = 27.1 bits (57), Expect = 1.8
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQ---NKTDDDTVNVICA 216
L I + + + DYTC VS +K Q+ + P T D +TV+V C
Sbjct: 442 LTIKSISLEDAADYTCAVSNDAGTVNKVTQVGIIHPPTLRHYTGPHIRSFDGNTVSVYCD 501
Query: 217 AEGVYPAP 240
V P+P
Sbjct: 502 VSAV-PSP 508
>AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobulin
domain-containingprotein F02G3.1 protein.
Length = 928
Score = 33.1 bits (72), Expect = 0.027
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +1
Query: 13 ASSDPLKMHRALRIIKT-NTDISGDYTCVVSTFMDEDSKTKQMTVFV-PETKFRLIQNKT 186
A SD + L II++ N++ +G Y CV + + + +T + VF+ P+ +
Sbjct: 259 ARSDKHNVEEGLLIIESLNSEDAGTYKCVANNTVGSNERTFDLAVFLKPKVDLKHEYVVK 318
Query: 187 DDDTVNVICAAEG 225
+ D V ++C+ G
Sbjct: 319 EGDDVELVCSYHG 331
Score = 27.1 bits (57), Expect = 1.8
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQ---NKTDDDTVNVICA 216
L I + + + DYTC VS +K Q+ + P T D +TV+V C
Sbjct: 442 LTIKSISLEDAADYTCAVSNDAGTVNKVTQVGIIHPPTLRHYTGPHIRSFDGNTVSVYCD 501
Query: 217 AEGVYPAP 240
V P+P
Sbjct: 502 VSAV-PSP 508
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 29.9 bits (64), Expect = 0.25
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVF-VPE-TKFRLIQNKTDDDTV 201
LRI + + G+Y VV + DS T +TV VPE +F +I+N D+ +
Sbjct: 5547 LRISNASREDYGEYRVVVENSVGSDSGTVNVTVADVPEPPRFPIIENILDEAVI 5600
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 29.9 bits (64), Expect = 0.25
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVF-VPE-TKFRLIQNKTDDDTV 201
LRI + + G+Y VV + DS T +TV VPE +F +I+N D+ +
Sbjct: 6076 LRISNASREDYGEYRVVVENSVGSDSGTVNVTVADVPEPPRFPIIENILDEAVI 6129
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 29.9 bits (64), Expect = 0.25
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVF-VPE-TKFRLIQNKTDDDTV 201
LRI + + G+Y VV + DS T +TV VPE +F +I+N D+ +
Sbjct: 5757 LRISNASREDYGEYRVVVENSVGSDSGTVNVTVADVPEPPRFPIIENILDEAVI 5810
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 29.9 bits (64), Expect = 0.25
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVF-VPE-TKFRLIQNKTDDDTV 201
LRI + + G+Y VV + DS T +TV VPE +F +I+N D+ +
Sbjct: 5547 LRISNASREDYGEYRVVVENSVGSDSGTVNVTVADVPEPPRFPIIENILDEAVI 5600
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 29.9 bits (64), Expect = 0.25
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVF-VPE-TKFRLIQNKTDDDTV 201
LRI + + G+Y VV + DS T +TV VPE +F +I+N D+ +
Sbjct: 6076 LRISNASREDYGEYRVVVENSVGSDSGTVNVTVADVPEPPRFPIIENILDEAVI 6129
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 29.9 bits (64), Expect = 0.25
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVF-VPE-TKFRLIQNKTDDDTV 201
LRI + + G+Y VV + DS T +TV VPE +F +I+N D+ +
Sbjct: 5757 LRISNASREDYGEYRVVVENSVGSDSGTVNVTVADVPEPPRFPIIENILDEAVI 5810
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.9 bits (64), Expect = 0.25
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVP---ETKFRLIQNKTDDDTVNVICA 216
L + +T G YTC+ + E T + V VP E + R++Q K + +T V C
Sbjct: 3181 LHLRETTLADGGTYTCIATNKAGESQTTTDVEVLVPPRIEDEERVLQGK-EGNTYMVHCQ 3239
Query: 217 AEGVYPAP 240
G P P
Sbjct: 3240 VTG-RPVP 3246
Score = 29.5 bits (63), Expect = 0.33
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 40 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPET 159
R L I+ TD G Y C V+ +KT + V VP T
Sbjct: 2061 RFLHIVSAKTDDHGSYACTVTNEAGVATKTFNLFVQVPPT 2100
Score = 28.3 bits (60), Expect = 0.77
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 40 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQN--KTDDDTVNVIC 213
+ L+I++T++D +G ++CV + VF P N K +T+ + C
Sbjct: 3821 QVLQILRTDSDHAGKWSCVAENDAGVKELEMVLDVFTPPVVSVKSDNPIKALGETITLFC 3880
Query: 214 AAEG-VYP 234
A G YP
Sbjct: 3881 NASGNPYP 3888
Score = 24.6 bits (51), Expect = 9.4
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVNVI 210
LRI + + + G+Y CVV+ ++ T QMT V + +I T + V+
Sbjct: 1326 LRIYEADKNDIGNYNCVVT----NEAGTSQMTTHVDVQEPPIILPSTQTNNTAVV 1376
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.9 bits (64), Expect = 0.25
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVP---ETKFRLIQNKTDDDTVNVICA 216
L + +T G YTC+ + E T + V VP E + R++Q K + +T V C
Sbjct: 3181 LHLRETTLADGGTYTCIATNKAGESQTTTDVEVLVPPRIEDEERVLQGK-EGNTYMVHCQ 3239
Query: 217 AEGVYPAP 240
G P P
Sbjct: 3240 VTG-RPVP 3246
Score = 29.5 bits (63), Expect = 0.33
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 40 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPET 159
R L I+ TD G Y C V+ +KT + V VP T
Sbjct: 2061 RFLHIVSAKTDDHGSYACTVTNEAGVATKTFNLFVQVPPT 2100
Score = 28.3 bits (60), Expect = 0.77
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 40 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQN--KTDDDTVNVIC 213
+ L+I++T++D +G ++CV + VF P N K +T+ + C
Sbjct: 3821 QVLQILRTDSDHAGKWSCVAENDAGVKELEMVLDVFTPPVVSVKSDNPIKALGETITLFC 3880
Query: 214 AAEG-VYP 234
A G YP
Sbjct: 3881 NASGNPYP 3888
Score = 24.6 bits (51), Expect = 9.4
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVNVI 210
LRI + + + G+Y CVV+ ++ T QMT V + +I T + V+
Sbjct: 1326 LRIYEADKNDIGNYNCVVT----NEAGTSQMTTHVDVQEPPIILPSTQTNNTAVV 1376
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 29.9 bits (64), Expect = 0.25
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVP---ETKFRLIQNKTDDDTVNVICA 216
L + +T G YTC+ + E T + V VP E + R++Q K + +T V C
Sbjct: 3181 LHLRETTLADGGTYTCIATNKAGESQTTTDVEVLVPPRIEDEERVLQGK-EGNTYMVHCQ 3239
Query: 217 AEGVYPAP 240
G P P
Sbjct: 3240 VTG-RPVP 3246
Score = 29.5 bits (63), Expect = 0.33
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 40 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPET 159
R L I+ TD G Y C V+ +KT + V VP T
Sbjct: 2061 RFLHIVSAKTDDHGSYACTVTNEAGVATKTFNLFVQVPPT 2100
Score = 28.3 bits (60), Expect = 0.77
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 40 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQN--KTDDDTVNVIC 213
+ L+I++T++D +G ++CV + VF P N K +T+ + C
Sbjct: 3821 QVLQILRTDSDHAGKWSCVAENDAGVKELEMVLDVFTPPVVSVKSDNPIKALGETITLFC 3880
Query: 214 AAEG-VYP 234
A G YP
Sbjct: 3881 NASGNPYP 3888
Score = 24.6 bits (51), Expect = 9.4
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVNVI 210
LRI + + + G+Y CVV+ ++ T QMT V + +I T + V+
Sbjct: 1326 LRIYEADKNDIGNYNCVVT----NEAGTSQMTTHVDVQEPPIILPSTQTNNTAVV 1376
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 29.9 bits (64), Expect = 0.25
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVP---ETKFRLIQNKTDDDTVNVICA 216
L + +T G YTC+ + E T + V VP E + R++Q K + +T V C
Sbjct: 3181 LHLRETTLADGGTYTCIATNKAGESQTTTDVEVLVPPRIEDEERVLQGK-EGNTYMVHCQ 3239
Query: 217 AEGVYPAP 240
G P P
Sbjct: 3240 VTG-RPVP 3246
Score = 29.5 bits (63), Expect = 0.33
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 40 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPET 159
R L I+ TD G Y C V+ +KT + V VP T
Sbjct: 2061 RFLHIVSAKTDDHGSYACTVTNEAGVATKTFNLFVQVPPT 2100
Score = 28.3 bits (60), Expect = 0.77
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 40 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQN--KTDDDTVNVIC 213
+ L+I++T++D +G ++CV + VF P N K +T+ + C
Sbjct: 3821 QVLQILRTDSDHAGKWSCVAENDAGVKELEMVLDVFTPPVVSVKSDNPIKALGETITLFC 3880
Query: 214 AAEG-VYP 234
A G YP
Sbjct: 3881 NASGNPYP 3888
Score = 24.6 bits (51), Expect = 9.4
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVNVI 210
LRI + + + G+Y CVV+ ++ T QMT V + +I T + V+
Sbjct: 1326 LRIYEADKNDIGNYNCVVT----NEAGTSQMTTHVDVQEPPIILPSTQTNNTAVV 1376
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 29.9 bits (64), Expect = 0.25
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVF-VPE-TKFRLIQNKTDDDTV 201
LRI + + G+Y VV + DS T +TV VPE +F +I+N D+ +
Sbjct: 4966 LRISNASREDYGEYRVVVENSVGSDSGTVNVTVADVPEPPRFPIIENILDEAVI 5019
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 29.9 bits (64), Expect = 0.25
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVP---ETKFRLIQNKTDDDTVNVICA 216
L + +T G YTC+ + E T + V VP E + R++Q K + +T V C
Sbjct: 3181 LHLRETTLADGGTYTCIATNKAGESQTTTDVEVLVPPRIEDEERVLQGK-EGNTYMVHCQ 3239
Query: 217 AEGVYPAP 240
G P P
Sbjct: 3240 VTG-RPVP 3246
Score = 29.5 bits (63), Expect = 0.33
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 40 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPET 159
R L I+ TD G Y C V+ +KT + V VP T
Sbjct: 2061 RFLHIVSAKTDDHGSYACTVTNEAGVATKTFNLFVQVPPT 2100
Score = 28.3 bits (60), Expect = 0.77
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +1
Query: 40 RALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQN--KTDDDTVNVIC 213
+ L+I++T++D +G ++CV + VF P N K +T+ + C
Sbjct: 3821 QVLQILRTDSDHAGKWSCVAENDAGVKELEMVLDVFTPPVVSVKSDNPIKALGETITLFC 3880
Query: 214 AAEG-VYP 234
A G YP
Sbjct: 3881 NASGNPYP 3888
Score = 24.6 bits (51), Expect = 9.4
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 46 LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDDTVNVI 210
LRI + + + G+Y CVV+ ++ T QMT V + +I T + V+
Sbjct: 1326 LRIYEADKNDIGNYNCVVT----NEAGTSQMTTHVDVQEPPIILPSTQTNNTAVV 1376
>U42439-9|AAM98033.1| 294|Caenorhabditis elegans Hypothetical
protein F19C7.8b protein.
Length = 294
Score = 27.9 bits (59), Expect = 1.0
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 16 SSDPLKMHRALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNK 183
+ DP +H +T IS TCV E + Q VFV E K R+ +++
Sbjct: 205 NGDPDWLHGFRLNDRTEHMISFPATCVAQMMAGEQAMRIQQNVFVAEQKLRMYRDQ 260
>U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical
protein F19C7.8a protein.
Length = 431
Score = 27.9 bits (59), Expect = 1.0
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 16 SSDPLKMHRALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNK 183
+ DP +H +T IS TCV E + Q VFV E K R+ +++
Sbjct: 342 NGDPDWLHGFRLNDRTEHMISFPATCVAQMMAGEQAMRIQQNVFVAEQKLRMYRDQ 397
>U10414-9|AAA19072.1| 712|Caenorhabditis elegans Hypothetical
protein F42A10.1 protein.
Length = 712
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +1
Query: 16 SSDPLKMHRALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTDDD 195
SS LK+ + ++ ++ GD T V+ + D TK+ T+ E + +Q++ + D
Sbjct: 225 SSQQLKIPAGISMLSVEQEVEGDDTLVLDAVLMSD--TKRQTLLDRE---KTLQSRINKD 279
Query: 196 TVN 204
+N
Sbjct: 280 NIN 282
>AF100306-9|ABB88216.1| 105|Caenorhabditis elegans Hypothetical
protein T24C4.9 protein.
Length = 105
Score = 26.6 bits (56), Expect = 2.3
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -2
Query: 242 LGAGYTPSAAQMTFTVSSSVLFCISRNFVSGTNTVICFVFESSSIKVDT 96
L AGY S A M + L C+ V GTNT++ S I V T
Sbjct: 33 LSAGYLASLALMGYFTIKMTLMCV----VFGTNTLVIITDVISMIAVFT 77
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 28 LKMHRALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMT 141
+ HRA+R + ++ DY + DE++ KQ T
Sbjct: 1 MSRHRAIRNLNLEDEMDDDYDDDYDDYEDEENPEKQYT 38
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 28 LKMHRALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMT 141
+ HRA+R + ++ DY + DE++ KQ T
Sbjct: 1 MSRHRAIRNLNLEDEMDDDYDDDYDDYEDEENPEKQYT 38
>Z99283-3|CAB16538.1| 327|Caenorhabditis elegans Hypothetical
protein Y70C5C.4 protein.
Length = 327
Score = 25.4 bits (53), Expect = 5.4
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = -2
Query: 230 YTPSAAQMTFTVSSSVLFCISRNFVSGTNTVICFVFESSSIKVDTTQV*SPEISVFVLIM 51
Y+P +T ++ L + +++ T+ I F F S+ + + T+ SP+ S +
Sbjct: 182 YSPDLYLLTENRMTTALLLLG--YMAFTSCQILFFFTSTLLYLFNTKSMSPKTSKMQKQL 239
Query: 50 RKALCI 33
KALC+
Sbjct: 240 FKALCV 245
>Z83112-1|CAB05538.1| 742|Caenorhabditis elegans Hypothetical
protein K02B7.1 protein.
Length = 742
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -1
Query: 162 LRLRHEHCHLFRFRIFVHKSGHYT 91
LR R++H H + +++H HY+
Sbjct: 409 LRQRNQHSHFHKHVLYMHLCPHYS 432
>Z74041-8|CAA98519.2| 610|Caenorhabditis elegans Hypothetical
protein T03F7.1 protein.
Length = 610
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 156 LRHEHCHLFRFRIFVHKSGHYTSIITRDISV 64
L H+H H ++ + FV + ++T D+SV
Sbjct: 164 LTHDHIHEYKKQFFVGEKMNWTVCSAADLSV 194
>DQ482732-1|ABF20555.1| 610|Caenorhabditis elegans SNF-11 protein.
Length = 610
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 156 LRHEHCHLFRFRIFVHKSGHYTSIITRDISV 64
L H+H H ++ + FV + ++T D+SV
Sbjct: 164 LTHDHIHEYKKQFFVGEKMNWTVCSAADLSV 194
>AY529124-1|AAT02634.1| 610|Caenorhabditis elegans GABA transporter
protein protein.
Length = 610
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 156 LRHEHCHLFRFRIFVHKSGHYTSIITRDISV 64
L H+H H ++ + FV + ++T D+SV
Sbjct: 164 LTHDHIHEYKKQFFVGEKMNWTVCSAADLSV 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.131 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,013,297
Number of Sequences: 27780
Number of extensions: 88392
Number of successful extensions: 327
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 327
length of database: 12,740,198
effective HSP length: 60
effective length of database: 11,073,398
effective search space used: 221467960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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