Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_B11
         (243 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    29   0.006
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    28   0.019
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              26   0.077
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   0.54 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   0.54 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                19   6.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    19   8.8  

>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 29.5 bits (63), Expect = 0.006
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
 Frame = +1

Query: 46  LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTD-----DDTVNVI 210
           L I   + D +G+Y+CV      E S T+++ V VP    R I   TD     +  V + 
Sbjct: 670 LMIEHLSPDHNGNYSCVARNLAAEVSHTQRLVVHVPP---RWIVEPTDVSVERNKHVALH 726

Query: 211 CAAEGVYPAP 240
           C A+GV P P
Sbjct: 727 CQAQGV-PTP 735



 Score = 24.2 bits (50), Expect = 0.23
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +1

Query: 79   GDYTCVVSTFMDEDSKTKQMTVFVP 153
            GDYTC V      D     +TV VP
Sbjct: 1376 GDYTCQVENAQGNDKLHYTLTVQVP 1400


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 27.9 bits (59), Expect = 0.019
 Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
 Frame = +1

Query: 46  LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVPETKFRLIQNKTD-----DDTVNVI 210
           L I     + SGDYTCV +    E   T ++ V VP    R I   TD     +  V + 
Sbjct: 674 LSITNLAAEHSGDYTCVAANPAAEVRYTAKLQVKVPP---RWIVEPTDVSVERNKHVALH 730

Query: 211 CAAEGVYPAP 240
           C A+GV P P
Sbjct: 731 CQAQGV-PTP 739



 Score = 24.2 bits (50), Expect = 0.23
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +1

Query: 79   GDYTCVVSTFMDEDSKTKQMTVFVP 153
            GDYTC V      D     +TV VP
Sbjct: 1380 GDYTCQVENAQGNDKLHYTLTVQVP 1404


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.8 bits (54), Expect = 0.077
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +1

Query: 16   SSDPLKM--HRALRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVP 153
            SSD L+     +L I + +   +G+Y+C V      D+ T Q+ V  P
Sbjct: 1319 SSDRLRQLPEGSLFIKEVDRTDAGEYSCYVENTFGHDTVTHQLIVHAP 1366



 Score = 22.6 bits (46), Expect = 0.71
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 46  LRIIKTNTDISGDYTCVVSTFMDEDSKTKQMTVFVP 153
           L I +   + SG Y C+V+  +  +S    +TV  P
Sbjct: 272 LIIREARVEDSGKYLCIVNNSVGGESVETVLTVTAP 307


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 0.54
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = -3

Query: 235 RDTLLXXXXXXXXXXXXSYSVSAGTSSPARTLSFVSFSNL 116
           RDT L            +Y+V    SSP    SF+   NL
Sbjct: 448 RDTCLLASDALKQILSAAYNVELHNSSPFSIYSFLERLNL 487


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 0.54
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = -3

Query: 235 RDTLLXXXXXXXXXXXXSYSVSAGTSSPARTLSFVSFSNL 116
           RDT L            +Y+V    SSP    SF+   NL
Sbjct: 486 RDTCLLASDALKQILSAAYNVELHNSSPFSIYSFLERLNL 525


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 19.4 bits (38), Expect = 6.7
 Identities = 10/28 (35%), Positives = 10/28 (35%)
 Frame = -1

Query: 171 QPELRLRHEHCHLFRFRIFVHKSGHYTS 88
           QP L   H H      R   H  G Y S
Sbjct: 280 QPSLASHHSHLSSALGRSACHSPGVYPS 307


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 19.0 bits (37), Expect = 8.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 230 YTPSAAQMTFTVSSSVLFCISR 165
           Y P AA +   + S V + ISR
Sbjct: 330 YPPLAAIVLGAIGSIVFYIISR 351


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.131    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,859
Number of Sequences: 438
Number of extensions: 1066
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4149981
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)