Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_B10
(538 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC330.06c |||thioredoxin peroxidase|Schizosaccharomyces pombe|... 87 1e-18
SPBC1773.02c |||thioredoxin peroxidase|Schizosaccharomyces pombe... 54 1e-08
SPAC926.09c |fas1||fatty acid synthase beta subunit Fas1|Schizos... 26 4.1
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 25 5.4
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 25 5.4
SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces ... 25 5.4
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 25 5.4
SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner me... 25 7.2
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 25 7.2
SPCC757.11c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 9.5
>SPCC330.06c |||thioredoxin peroxidase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 156
Score = 87.4 bits (207), Expect = 1e-18
Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Frame = +2
Query: 41 IKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKM 220
+ VG LP + L+E+ P V E + K ++ VPGAFTP CS + +PGY+ N +
Sbjct: 2 VAVGSTLPKVTLWENKPEEVV---EFPSQGKFIIVGVPGAFTPPCS-SQVPGYIANEKQF 57
Query: 221 KSEGVSEIVCVSVNDPYVMAAWGAQHN--TKGKVRMLADPNGAFIKALDLGTNLPP-LGG 391
++G+S I V+VND +V AW + + V +AD NG F KA D G + LG
Sbjct: 58 AAKGISGIYVVAVNDVFVTKAWKKSFDGGEQSGVHFVADWNGEFTKAFDAGFDASGLLGP 117
Query: 392 FRSKRFSMVIND 427
RSKR++ V+ +
Sbjct: 118 LRSKRYAAVVEN 129
>SPBC1773.02c |||thioredoxin peroxidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 195
Score = 54.4 bits (125), Expect = 1e-08
Identities = 35/106 (33%), Positives = 56/106 (52%)
Frame = +2
Query: 41 IKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKM 220
I+VGD++P + L D + +ITA K +V+FA P A TPGC+K G+ N K+
Sbjct: 46 IQVGDVIPDITL-PDEDGTSIRLRDITANKGLVIFAYPKASTPGCTKQGC-GFRDNYPKI 103
Query: 221 KSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPNGAFIKAL 358
++ E++ +S + A+ + N +L+DP G IK L
Sbjct: 104 QASDY-EVLGLSFDTSKAQKAFKDKQNF--PYHLLSDPKGELIKKL 146
>SPAC926.09c |fas1||fatty acid synthase beta subunit
Fas1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2073
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 366 PRSRALMNAPFGSASIR-TFPLVLCWAPQAAITYGSFTDTHT 244
P S +NA A TFP+VL W A + SF D H+
Sbjct: 697 PGSVEAVNAVISIAKANPTFPIVLQWTGGRAGGHHSFEDFHS 738
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 356 LDLGTNLPPLGGFRSKRFSMVINDRQSR 439
+DLGT +G F + R ++ ND+ +R
Sbjct: 7 IDLGTTYSCVGHFSNNRVEIIANDQGNR 34
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = +2
Query: 194 GYVQNADKMKSEGVSEIVCVSVNDPYVMAAWGAQH-----NTKGKVRMLAD 331
GY+ +++ + EG + + V++P A W +H N + + +L D
Sbjct: 329 GYLHSSELLYPEGTEQQIISLVDEPNQNALWIIEHEHSQDNNRSNIELLKD 379
>SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 580
Score = 25.4 bits (53), Expect = 5.4
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 228 SLFILSAFCTYPGK*VLEHPGVNAPGTANKTTFFPAVISQVF 103
S+F +AF +Y G E+ G+ A T N FP + QVF
Sbjct: 274 SVFSTAAF-SYAGT---EYIGIAASETKNPAKAFPKAVKQVF 311
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 356 LDLGTNLPPLGGFRSKRFSMVINDRQSR 439
+DLGT +G F + R ++ ND+ +R
Sbjct: 7 IDLGTTYSCVGHFSNNRVEIIANDQGNR 34
>SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner
membrane translocase Oxa102|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 409
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 337 IWISKHSYLSLGVVLGTPSGHNIRIVHRHAYYFRN 233
I S S+ S+ L G IR +H H +F+N
Sbjct: 9 IKFSSKSHYSVSCFLIATQGAKIRQIHTHNTFFKN 43
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 484 SEHDNPVPSGSTFNSSTLPVIDNH 413
S H P P G+T NSS+ + H
Sbjct: 264 SAHSRPSPQGTTANSSSASISSLH 287
>SPCC757.11c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 471
Score = 24.6 bits (51), Expect = 9.5
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = -2
Query: 471 IQCRQVLRSIPLLCLSLITIEKRFERNPPNGGRFVPRSRALMNAPFGSASIRTFPLVLCW 292
I +L + +LC+S + ER + G S ++ P +A + +P++
Sbjct: 49 ISAALMLLNNTILCISFTIVVPTSERFVQHLGGGNGLSGVIIGLPTITALVLLYPMLRFS 108
Query: 291 APQAAITYGSFTDTHTIS 238
P+AA Y + +T+S
Sbjct: 109 TPKAAKGYTIYRRPYTMS 126
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,389,509
Number of Sequences: 5004
Number of extensions: 50502
Number of successful extensions: 151
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 222442660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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