Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_B10
(538 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0234 - 27739272-27739525,27739810-27739889,27740894-27741048 123 1e-28
06_03_0811 + 24830496-24831194 121 3e-28
02_01_0691 - 5167260-5167937 111 3e-25
01_01_1148 - 9113728-9113835,9113952-9114035,9114831-9114992,911... 101 3e-22
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 46 2e-05
03_01_0595 + 4391877-4392005,4392155-4392287,4392402-4392490,439... 31 0.44
02_01_0390 - 2824585-2825307,2828206-2828460,2829006-2829107,282... 31 0.58
06_01_0861 + 6527279-6527582,6527619-6527719,6527817-6528042,652... 31 0.77
05_07_0328 + 29286109-29286120,29286982-29287146,29288427-292885... 30 1.0
11_06_0690 + 26303733-26306540 29 1.8
10_08_0906 - 21472490-21472732,21472947-21473271,21473351-214735... 29 1.8
06_01_0671 - 4899611-4899829,4900870-4901448 29 2.3
09_01_0128 + 1932721-1935181,1936099-1936256 29 3.1
12_02_1144 + 26449490-26452292,26452401-26452742,26453141-26453160 28 5.4
11_08_0014 - 27631971-27632374,27632486-27635402 28 5.4
10_06_0139 - 11139004-11139031,11139300-11141017,11141408-111414... 28 5.4
11_08_0029 - 27783907-27784310,27784418-27786616,27786751-27787333 27 7.2
05_04_0392 - 20889699-20891726 27 7.2
03_02_0850 + 11775232-11776077,11776761-11777321 27 7.2
02_04_0627 + 24585712-24585845,24586415-24586503,24587039-245871... 27 7.2
06_03_1368 - 29612463-29612638,29613135-29613222,29613334-296134... 27 9.5
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 27 9.5
02_05_0934 - 32851709-32853398,32854458-32854738 27 9.5
>01_06_0234 - 27739272-27739525,27739810-27739889,27740894-27741048
Length = 162
Score = 123 bits (296), Expect = 1e-28
Identities = 62/136 (45%), Positives = 89/136 (65%), Gaps = 4/136 (2%)
Frame = +2
Query: 32 MAPIKVGDMLPS--LDLFE-DSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYV 202
MAP+ VGD LP L F+ + +V+ + AGKKVVLF VPGAFTP CS H+PG++
Sbjct: 1 MAPVAVGDTLPDGQLGWFDGEDKLQQVSVHGLAAGKKVVLFGVPGAFTPTCSNQHVPGFI 60
Query: 203 QNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPNGAFIKALDLGTNLPP 382
A+++K++GV +I+ VSVNDP+VM AW + V+ LAD G + KAL L +L
Sbjct: 61 NQAEQLKAKGVDDILLVSVNDPFVMKAWAKSYPENKHVKFLADGLGTYTKALGLELDLSE 120
Query: 383 LG-GFRSKRFSMVIND 427
G G RS+RF+++ ++
Sbjct: 121 KGLGIRSRRFALLADN 136
>06_03_0811 + 24830496-24831194
Length = 232
Score = 121 bits (292), Expect = 3e-28
Identities = 65/148 (43%), Positives = 94/148 (63%), Gaps = 7/148 (4%)
Frame = +2
Query: 5 RALHTSKIAMAPIKVGDMLPSLDL-FEDSPANKVNTC---EITAGKKVVLFAVPGAFTPG 172
RA+ S A A I VGD LP L + DSP ++ T ++TAGKKVVLFAVPGAFTP
Sbjct: 59 RAVSASAPAAATIAVGDKLPDATLSYFDSPDGELKTVTVRDLTAGKKVVLFAVPGAFTPT 118
Query: 173 CSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPNGAFIK 352
C++ H+PG+V A +++++GV + CVSVND +VM AW +V +L+D NG +
Sbjct: 119 CTQKHVPGFVAKAGELRAKGVDAVACVSVNDAFVMRAWKESLGVGDEVLLLSDGNGELAR 178
Query: 353 ALDLGTNL--PPLG-GFRSKRFSMVIND 427
A+ + +L P G G RS+R++++ D
Sbjct: 179 AMGVELDLSDKPAGLGVRSRRYALLAED 206
>02_01_0691 - 5167260-5167937
Length = 225
Score = 111 bits (267), Expect = 3e-25
Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 8/149 (5%)
Frame = +2
Query: 5 RALHTSKIAMAPIKVGDMLPSLDLFEDSPAN----KVNTCEITAGKKVVLFAVPGAFTPG 172
R+ ++ +A I VGD LP L PA+ V E+TAG+K VLFAVPGAFTP
Sbjct: 51 RSAASASTVVATIAVGDKLPDATLSYFDPADGELKTVTVAELTAGRKAVLFAVPGAFTPT 110
Query: 173 CSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNT-KGKVRMLADPNGAFI 349
CS+ HLPG+++ A ++ ++GV I CVSVND +VM AW V +L+D N
Sbjct: 111 CSQKHLPGFIEKAGELHAKGVDAIACVSVNDAFVMRAWKESLGLGDADVLLLSDGNLELT 170
Query: 350 KALDLGTNL--PPLG-GFRSKRFSMVIND 427
+AL + +L P+G G RS+R++++ +D
Sbjct: 171 RALGVEMDLSDKPMGLGVRSRRYALLADD 199
>01_01_1148 -
9113728-9113835,9113952-9114035,9114831-9114992,
9115120-9115224,9115584-9116216,9117412-9117496,
9118426-9118520,9119083-9119241,9119968-9119997,
9120100-9120306
Length = 555
Score = 101 bits (243), Expect = 3e-22
Identities = 47/106 (44%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Frame = +2
Query: 113 EITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAWGA 292
+I GKKVV+F +PGA+T CS+ H+P Y N DK+K++GV ++CVSVNDPY + W
Sbjct: 66 DIFHGKKVVIFGLPGAYTGVCSQAHVPSYKNNIDKLKAKGVDSVICVSVNDPYALNGWAE 125
Query: 293 QHNTKGKVRMLADPNGAFIKALDLGTNL-PPLGGFRSKRFSMVIND 427
+ K + D +G+F K+LDL +L L G RS R+S ++D
Sbjct: 126 KLQAKDAIEFYGDFDGSFHKSLDLEVDLSAALLGRRSHRWSAFVDD 171
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 46.0 bits (104), Expect = 2e-05
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Frame = +2
Query: 20 SKIAMAPIKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSK--THLP 193
S +AM + +GD +P+L+L DS K+ + V+LF+ PG FTP C+ +
Sbjct: 32 SFVAMPGLTIGDTVPNLEL--DSTHGKIRIHDFVGDTYVILFSHPGDFTPVCTTELAAMA 89
Query: 194 GYVQNADK--MKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPNGAFIKALDL 364
GY + DK +K G+S V + ++ + + ++ADP+ IK L++
Sbjct: 90 GYAKEFDKRGVKLLGIS-CDDVQSHKDWIKDIEAYKPGNRVTYPIMADPSREAIKQLNM 147
>03_01_0595 +
4391877-4392005,4392155-4392287,4392402-4392490,
4392639-4392696,4393182-4393337,4393556-4393704,
4394208-4394327,4394513-4394726,4394813-4394915,
4395022-4395069,4395267-4395312,4395647-4395834,
4395943-4396105,4396227-4396292
Length = 553
Score = 31.5 bits (68), Expect = 0.44
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +3
Query: 330 IQMAHSSKLL-----TSERTCHRWVDSVRNVSQWLSMTGKVEELNVEPDGTGLSCSLADK 494
+Q H SK+ ER C VD VR++ + + +++++ + PDGT +L D
Sbjct: 277 LQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKIELNPDGTVKHFALTDG 336
Query: 495 LKV 503
++
Sbjct: 337 TQI 339
>02_01_0390 -
2824585-2825307,2828206-2828460,2829006-2829107,
2829386-2829598,2829688-2829897
Length = 500
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = -1
Query: 361 VKSFDECAIWISKHSYLSLGVVLGTPSGHNIRIVHRHAYYFRNALTFHLISVLHV-SRQM 185
++ FD +++ + +G V+G P+G+++ HR AY A T++ ++ V SR M
Sbjct: 417 LQGFDSWYSAAAENPHDLVGAVVGGPNGNDVFTDHRGAYMQTEACTYNTAPMVGVFSRLM 476
Query: 184 SLRTPR 167
L R
Sbjct: 477 ELERRR 482
>06_01_0861 +
6527279-6527582,6527619-6527719,6527817-6528042,
6528132-6528475,6528624-6528989,6529080-6529347,
6529479-6529696
Length = 608
Score = 30.7 bits (66), Expect = 0.77
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 146 AVPGAFTPGCSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAW-GAQHNTKGKVRM 322
A+ G P C H+ + K +S+ V V + YV+A W G+ H++
Sbjct: 140 ALDGTHIPACVPMHMQDRFRGRKKFQSQNVLAAVDFDLRFLYVLAGWEGSAHDSYVLQDA 199
Query: 323 LADPNG 340
L+ NG
Sbjct: 200 LSRTNG 205
>05_07_0328 +
29286109-29286120,29286982-29287146,29288427-29288589,
29288625-29288903,29289047-29289122,29289725-29289787,
29292116-29292164,29292413-29292504,29293017-29293068,
29293209-29293271,29293382-29293431,29293941-29294016,
29294444-29294656,29294763-29294869,29294966-29295074,
29295489-29295689,29295773-29296033,29296154-29296171,
29296287-29296397,29296755-29297030,29297108-29297382,
29297814-29298165,29298371-29298655,29298715-29299261,
29301658-29301781,29301871-29301946,29302062-29302136,
29302300-29302353,29302833-29302892,29302977-29303093,
29303228-29303361,29303480-29303682,29303879-29303976,
29304358-29304461,29304537-29304702,29304803-29304925,
29305047-29305129,29305217-29305358,29305523-29305549,
29305784-29305854,29305930-29306518
Length = 2046
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 311 KVRMLADPNGAFIKALDLGTNLPPLGGFRSKRFSMVINDRQSRG 442
K+ + ADPNG++++ L+ NL P+ F +V DRQ +G
Sbjct: 526 KLNLQADPNGSYVEVLERYVNLGPI-----VDFCVVDLDRQGQG 564
>11_06_0690 + 26303733-26306540
Length = 935
Score = 29.5 bits (63), Expect = 1.8
Identities = 24/90 (26%), Positives = 36/90 (40%)
Frame = +2
Query: 35 APIKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNAD 214
+P + G + L SP V+ CE +A + AV GAFT + P +V A
Sbjct: 524 SPARRGAAVGKESLLPSSPVAVVSQCEDSAPETQSTLAVVGAFTRPVFWSPQPVFVPAAK 583
Query: 215 KMKSEGVSEIVCVSVNDPYVMAAWGAQHNT 304
E + P + A G+QH +
Sbjct: 584 DSPPESAA---ATEPPQPLLPATVGSQHES 610
>10_08_0906 -
21472490-21472732,21472947-21473271,21473351-21473598,
21473823-21474071
Length = 354
Score = 29.5 bits (63), Expect = 1.8
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +2
Query: 170 GCSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPNGAFI 349
G T+ P +Q+ M S++V +++ V G Q GK + PNGAFI
Sbjct: 208 GLRMTYYPPCLQSDKVMGISPHSDVVGLTLL-LQVNDVQGLQIKKDGKWLSVDAPNGAFI 266
Query: 350 KALDLGTNLPPL--GGFRSKRFSMVINDRQSR 439
+++G L L G FRS VIN + R
Sbjct: 267 --VNIGDTLEILSNGKFRSVEHRAVINPNKER 296
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +2
Query: 41 IKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKM 220
+ G P+ L D V+ + G+ VV++ P TPGC+K + + +K
Sbjct: 118 VSKGSAAPNFTL-RDQDGRAVSLSKFK-GRPVVVYFYPADETPGCTK-QACAFRDSYEKF 174
Query: 221 KSEGVSEIVCVSVND 265
K G +E++ +S +D
Sbjct: 175 KKAG-AEVIGISGDD 188
>09_01_0128 + 1932721-1935181,1936099-1936256
Length = 872
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -3
Query: 299 CAGHPKRP*HTDRSQTRILFQKRPHFSSYQRFA 201
C+G KR H D+ QT L + H ++R+A
Sbjct: 337 CSGVDKRQKHIDQIQTNSLGMQEKHTDKFERYA 369
>12_02_1144 + 26449490-26452292,26452401-26452742,26453141-26453160
Length = 1054
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 517 FEYFLTLSLSASEHDNPVPSGSTFNSS 437
F+Y L+LS ++ D PVP+ FN++
Sbjct: 622 FQYLRYLNLSYNQLDGPVPTTGVFNAT 648
>11_08_0014 - 27631971-27632374,27632486-27635402
Length = 1106
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 517 FEYFLTLSLSASEHDNPVPSGSTFNSSTL 431
F Y TL+LS+++ +P+G F++ TL
Sbjct: 688 FTYLTTLNLSSNKLKGEIPNGGVFSNITL 716
>10_06_0139 -
11139004-11139031,11139300-11141017,11141408-11141477,
11142520-11143361
Length = 885
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 420 SMTGKVEELNVEPDGTGLSCSLADKL 497
S+ GK+EEL V PDG+ L + D++
Sbjct: 19 SLLGKMEELLVAPDGSRLPKGVKDRM 44
>11_08_0029 - 27783907-27784310,27784418-27786616,27786751-27787333
Length = 1061
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 517 FEYFLTLSLSASEHDNPVPSGSTFNSSTL 431
F Y TL+LS++ +P+G F++ TL
Sbjct: 643 FTYLTTLNLSSNNLKGEIPNGGVFSNITL 671
>05_04_0392 - 20889699-20891726
Length = 675
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 338 GAFIKALDLGTNLPPLGGFRSKRFSMVINDRQSR 439
G + +DLGT +G +R+ R ++ ND+ +R
Sbjct: 43 GGTVIGIDLGTTYSCVGVYRNDRVEIIANDQGNR 76
>03_02_0850 + 11775232-11776077,11776761-11777321
Length = 468
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 514 EYFLTLSLSASEHDNPVPSGS 452
EY+LTL L ASE P P G+
Sbjct: 124 EYWLTLDLLASEQGAPTPCGA 144
>02_04_0627 +
24585712-24585845,24586415-24586503,24587039-24587137,
24587326-24587405
Length = 133
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +3
Query: 333 QMAHSSKLLTSERTCHRWVDSVRNVSQWLSMTGKVEELNVEPDGTGLSCSLAD 491
++ SS ++ +T + V+ + L+ + K EL+VE DG+ L +LAD
Sbjct: 34 EIVASSPVVVFSKTYCPFCARVKRLLAELAASYKAVELDVESDGSELQSALAD 86
>06_03_1368 -
29612463-29612638,29613135-29613222,29613334-29613474,
29613561-29613595,29613990-29614054,29614286-29614335,
29614417-29614521,29614608-29614688,29614771-29614852,
29614941-29614995,29615111-29616164,29617202-29617289,
29617379-29617485,29617568-29617686,29617784-29617994
Length = 818
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -1
Query: 499 LSLSASEHDNPVPSGSTFNSSTLPVIDNH*ETFRTESTQ 383
LSLS +E+ N V +F++S N ET TES Q
Sbjct: 267 LSLSKAENANAVDGSGSFDTSQSHSSSNMEETAHTESFQ 305
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = +2
Query: 275 MAAWGAQHNTKGKVRMLADPNGAFIKALDLGTNLPPLGGFRSKRFSMVIN 424
+ AW ++R+LAD G + L P GG R R +IN
Sbjct: 1801 LLAWTGNDVLNRRLRILADSKGYILDDTGLYLATPGSGGKRGGRSDAIIN 1850
>02_05_0934 - 32851709-32853398,32854458-32854738
Length = 656
Score = 27.1 bits (57), Expect = 9.5
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Frame = +2
Query: 65 SLDLFEDSPANKVNTCEITAGKKVVLF--AVPGAFTPGCSKTHLPGYVQNADKMKSEGVS 238
++ LF++S A + KV +F V ++ P P Y + MK+E +
Sbjct: 156 NVPLFQNSMAGNSSNFATRPSDKVPVFQPTVQPSYRPA------PNYKNHGAIMKNEAPA 209
Query: 239 EIVCVSVNDPYVMAAWG--AQHNTKGKVRMLADPNG 340
I+ +S +PY W A+ KG +R + G
Sbjct: 210 RIIPISALNPY-QGRWAIKARVTAKGDIRRYHNAKG 244
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,783,321
Number of Sequences: 37544
Number of extensions: 335310
Number of successful extensions: 959
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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