Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_B07
         (350 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M60278-1|AAA35956.1|  208|Homo sapiens heparin-binding EGF-like ...    29   4.1  
BC033097-1|AAH33097.1|  208|Homo sapiens heparin-binding EGF-lik...    29   4.1  
AY164533-1|AAN46738.1|  208|Homo sapiens diphtheria toxin recept...    29   4.1  
AK222688-1|BAD96408.1|  208|Homo sapiens diphtheria toxin recept...    29   4.1  
AC004634-1|AAC15470.1|  208|Homo sapiens HBGF protein.                 29   4.1  
AL161628-4|CAI13378.1|  387|Homo sapiens ELAV (embryonic lethal,...    29   5.5  
AB209294-1|BAD92531.1|  367|Homo sapiens ELAV (embryonic lethal,...    28   9.5  

>M60278-1|AAA35956.1|  208|Homo sapiens heparin-binding EGF-like
           growth factor protein.
          Length = 208

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +1

Query: 70  ILITVVLSALVTRVSLTPLCNNTAVSITSNDSPPFNNADPVMQL 201
           + +  VLSALVT  SL  L    A   TSN  PP  + D ++ L
Sbjct: 11  LFLAAVLSALVTGESLERLRRGLAAG-TSNPDPPTVSTDQLLPL 53


>BC033097-1|AAH33097.1|  208|Homo sapiens heparin-binding EGF-like
           growth factor protein.
          Length = 208

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +1

Query: 70  ILITVVLSALVTRVSLTPLCNNTAVSITSNDSPPFNNADPVMQL 201
           + +  VLSALVT  SL  L    A   TSN  PP  + D ++ L
Sbjct: 11  LFLAAVLSALVTGESLERLRRGLAAG-TSNPDPPTVSTDQLLPL 53


>AY164533-1|AAN46738.1|  208|Homo sapiens diphtheria toxin receptor
           (heparin-binding epidermal growth factor-like growth
           protein.
          Length = 208

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +1

Query: 70  ILITVVLSALVTRVSLTPLCNNTAVSITSNDSPPFNNADPVMQL 201
           + +  VLSALVT  SL  L    A   TSN  PP  + D ++ L
Sbjct: 11  LFLAAVLSALVTGESLERLRRGLAAG-TSNPDPPTVSTDQLLPL 53


>AK222688-1|BAD96408.1|  208|Homo sapiens diphtheria toxin receptor
           (heparin-binding epidermal growth factor-like growth
           protein.
          Length = 208

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +1

Query: 70  ILITVVLSALVTRVSLTPLCNNTAVSITSNDSPPFNNADPVMQL 201
           + +  VLSALVT  SL  L    A   TSN  PP  + D ++ L
Sbjct: 11  LFLAAVLSALVTGESLERLRRGLAAG-TSNPDPPTVSTDQLLPL 53


>AC004634-1|AAC15470.1|  208|Homo sapiens HBGF protein.
          Length = 208

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +1

Query: 70  ILITVVLSALVTRVSLTPLCNNTAVSITSNDSPPFNNADPVMQL 201
           + +  VLSALVT  SL  L    A   TSN  PP  + D ++ L
Sbjct: 11  LFLAAVLSALVTGESLERLRRGLAAG-TSNPDPPTVSTDQLLPL 53


>AL161628-4|CAI13378.1|  387|Homo sapiens ELAV (embryonic lethal,
           abnormal vision, Drosophila)-like 2 (Hu antigen B)
           protein.
          Length = 387

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
 Frame = +1

Query: 79  TVVLSALVTRVSLTPLCNNTA---VSITSNDSPPFNNAD 186
           T V++A+ T++S  P CNNTA    +I +N S P ++ +
Sbjct: 23  TGVIAAMETQLSNGPTCNNTANGPTTINNNCSSPVDSGN 61


>AB209294-1|BAD92531.1|  367|Homo sapiens ELAV (embryonic lethal,
           abnormal vision, Drosophila)-like 2 (Hu antigen B) vari
           protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
 Frame = +1

Query: 85  VLSALVTRVSLTPLCNNTA---VSITSNDSPPFNNAD 186
           V++A+ T++S  P CNNTA    +I +N S P ++ +
Sbjct: 5   VIAAMETQLSNGPTCNNTANGPTTINNNCSSPVDSGN 41


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,630,624
Number of Sequences: 237096
Number of extensions: 600958
Number of successful extensions: 765
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)