Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_B04
(477 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 45 3e-05
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 45 3e-05
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 38 0.004
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 38 0.004
U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidan... 27 5.3
U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidan... 27 5.3
D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin ... 27 5.3
AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein. 27 5.3
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 7.0
AF100659-8|AAC68966.1| 688|Caenorhabditis elegans Hypothetical ... 27 9.2
AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical ... 27 9.2
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 44.8 bits (101), Expect = 3e-05
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Frame = +2
Query: 149 LKETYTSSKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSK 328
LK T +VV SPL + + + L AGA ++ E++ LG S + + L +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGG---SRIFEEFSGLME 69
Query: 329 TFSEMNPDYFT-MANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKK 475
+ + T + N+++V YT+ + + TV + Y++ E++DFS T++
Sbjct: 70 AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQ 120
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 44.8 bits (101), Expect = 3e-05
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Frame = +2
Query: 149 LKETYTSSKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYISLSK 328
LK T +VV SPL + + + L AGA ++ E++ LG S + + L +
Sbjct: 13 LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGG---SRIFEEFSGLME 69
Query: 329 TFSEMNPDYFT-MANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKK 475
+ + T + N+++V YT+ + + TV + Y++ E++DFS T++
Sbjct: 70 AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQ 120
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Frame = +2
Query: 164 TSSKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYIS-LSKTFSE 340
TS + V SP+ +++ + L GA +R +I + NG + S ++K +
Sbjct: 24 TSDQLTPCVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLNS 83
Query: 341 MNPDYFTM-ANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKK 475
D T+ AN+++V + + + FT +R+ Y +E TIDF +++
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQE 130
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 37.9 bits (84), Expect = 0.004
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Frame = +2
Query: 164 TSSKDKNVVSSPLGVMMLMLLYKAGAGEGSRAEIDKFLGNGDYSGVANPYIS-LSKTFSE 340
TS + V SP+ +++ + L GA +R +I + NG + S ++K +
Sbjct: 24 TSDQLTPCVFSPVSILLSLALVHLGAKGHTRHDIRNSVVNGSTDEQFIEHFSFINKLLNS 83
Query: 341 MNPDYFTM-ANKIYVGNKYTLDEKFTITVRQ-YQSEVETIDFSDTKK 475
D T+ AN+++V + + + FT +R+ Y +E TIDF +++
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQE 130
>U70851-2|AAM97996.1| 671|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform a protein.
Length = 671
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 320 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 457
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 594 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 640
>U70851-1|AAM97997.1| 699|Caenorhabditis elegans Osmotic avoidance
abnormal protein3, isoform b protein.
Length = 699
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 320 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 457
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 622 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 668
>D38632-1|BAA07612.1| 672|Caenorhabditis elegans OSM-3 (kinesin
protein) protein.
Length = 672
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 320 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 457
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 595 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 641
>AF149285-1|AAF99084.1| 672|Caenorhabditis elegans Osm-3 protein.
Length = 672
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 320 LSKTFSE-MNPDYFTMANKIYVGNKYTLDEKFTITVRQYQSEVETID 457
L+K+ SE + YF +I V NKY D+K + + + S+ T D
Sbjct: 594 LAKSDSENLANSYFKPVKQINVINKYKSDQKLSTSKSLFPSKTPTFD 640
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.1 bits (57), Expect = 7.0
Identities = 23/74 (31%), Positives = 31/74 (41%)
Frame = +2
Query: 230 KAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYVGNKYTLDEK 409
K G E R++ +K + SGVA S F E N +M + KY DEK
Sbjct: 1948 KRGIAEFERSKQEKEVQR---SGVAETSHSSKHIFDESN---ISMDDVFNTSQKYKSDEK 2001
Query: 410 FTITVRQYQSEVET 451
+ R + EV T
Sbjct: 2002 LSTPERTVEPEVST 2015
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.1 bits (57), Expect = 7.0
Identities = 23/74 (31%), Positives = 31/74 (41%)
Frame = +2
Query: 230 KAGAGEGSRAEIDKFLGNGDYSGVANPYISLSKTFSEMNPDYFTMANKIYVGNKYTLDEK 409
K G E R++ +K + SGVA S F E N +M + KY DEK
Sbjct: 1948 KRGIAEFERSKQEKEVQR---SGVAETSHSSKHIFDESN---ISMDDVFNTSQKYKSDEK 2001
Query: 410 FTITVRQYQSEVET 451
+ R + EV T
Sbjct: 2002 LSTPERTVEPEVST 2015
>AF100659-8|AAC68966.1| 688|Caenorhabditis elegans Hypothetical
protein F58E2.3 protein.
Length = 688
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/44 (20%), Positives = 24/44 (54%)
Frame = -2
Query: 311 TDWQPRYNLHCLKTCRSPHDYLHRRQLCTEALASSRLMVKTQHS 180
+++ +++++C K C + ++L +L +S L +K H+
Sbjct: 282 SEFDKKFSIYCPKACEELRNVQSSKELECTSLCTSELSIKVLHN 325
>AF098499-2|AAC67396.1| 155|Caenorhabditis elegans Hypothetical
protein C43H8.1 protein.
Length = 155
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +2
Query: 8 GSRRANMIKLCLLAVIAVCNVRAFYSSDHEYNRTALGDAIDKTSLQFLKETYTS 169
GS + CL+++ A +E+ A GD++D QFL E S
Sbjct: 33 GSTMEEAFEACLVSMFGYMTDLAKVDEMYEFYWKASGDSLDGLLFQFLDEALNS 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,972,962
Number of Sequences: 27780
Number of extensions: 232108
Number of successful extensions: 736
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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