Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_B01
(531 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0255 + 19462668-19462695,19463443-19464491 221 3e-58
01_06_1721 - 39426957-39428005,39428812-39428839 217 3e-57
08_01_0142 - 1121762-1122822,1123087-1123114 204 5e-53
06_03_0718 + 23840198-23840409,23841368-23841518,23842190-238422... 204 5e-53
11_01_0448 - 3469398-3469676,3470015-3470284,3470386-3470476,347... 169 1e-42
12_01_0448 + 3537661-3538018,3538920-3539047,3539740-3539763,354... 66 2e-11
07_03_0473 - 18525712-18525858,18526049-18526162,18526442-185265... 32 0.33
02_01_0286 + 1921049-1921726 31 0.44
07_03_1705 + 28848293-28848321,28848766-28848841,28848940-288490... 30 1.3
08_01_0178 - 1509100-1511214 29 2.3
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 29 3.1
04_04_0920 + 29429114-29430934 28 4.1
02_03_0183 + 16106205-16106474 28 4.1
07_03_1620 - 28180020-28180862 28 5.4
06_01_0191 + 1478267-1478929,1480579-1480789,1482625-1482925,148... 28 5.4
03_05_0306 - 22956474-22956980 28 5.4
03_02_0461 - 8658494-8658876,8659791-8659859,8661746-8662187 28 5.4
12_01_0839 + 7833111-7833380,7833925-7834161 27 7.1
08_02_0152 - 13304578-13305288 27 7.1
08_02_0147 - 13214179-13214889 27 7.1
03_06_0656 - 35330109-35331011,35331154-35331360,35331455-353316... 27 7.1
01_06_0460 + 29545030-29546377,29546463-29547085 27 7.1
09_02_0562 - 10687827-10688126,10688228-10689022 27 9.4
09_01_0010 - 270146-270568 27 9.4
05_03_0060 - 7905455-7906216,7906723-7906887 27 9.4
02_03_0174 + 15991418-15991888,15992007-15992126,15992763-159928... 27 9.4
02_02_0707 + 13144147-13144788,13145115-13148663 27 9.4
>05_04_0255 + 19462668-19462695,19463443-19464491
Length = 358
Score = 221 bits (540), Expect = 3e-58
Identities = 112/175 (64%), Positives = 129/175 (73%)
Frame = +1
Query: 4 VPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLAR 183
+ + G+E E TTQG DDL +RCA+Y + G FAKWR VLKIG N PS AI NA LAR
Sbjct: 109 IEVAGTEKETTTQGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLAIDLNAQGLAR 168
Query: 184 YASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPNM 363
YA ICQ +VPIVEPE+L DG HD+DR V+EVVLAA YKAL++HHV LEGTLLKPNM
Sbjct: 169 YAIICQENGLVPIVEPEILVDGPHDIDRCAYVSEVVLAACYKALNEHHVLLEGTLLKPNM 228
Query: 364 VTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAIN 528
VT G KK +P IA TV L RTVPAAVP + FLS GQSEEEA++NLNA+N
Sbjct: 229 VTPGSDAKKV-SPEVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMN 282
>01_06_1721 - 39426957-39428005,39428812-39428839
Length = 358
Score = 217 bits (531), Expect = 3e-57
Identities = 111/175 (63%), Positives = 128/175 (73%)
Frame = +1
Query: 4 VPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLAR 183
V + G+ E TTQG DDL +RCA+Y + G FAKWR VLKIG N PS +I NA LAR
Sbjct: 109 VEVAGTNKETTTQGHDDLGKRCAKYYEAGARFAKWRAVLKIGPNEPSQLSIDLNAQGLAR 168
Query: 184 YASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPNM 363
YA ICQ +VPIVEPE+L DG HD++R VTE VLAA YKAL++HHV LEG+LLKPNM
Sbjct: 169 YAIICQENGLVPIVEPEILVDGSHDIERCAYVTEKVLAACYKALNEHHVLLEGSLLKPNM 228
Query: 364 VTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAIN 528
VT G KK +P IA TV AL RTVPAAVP + FLS GQSEEEA+VNLNA+N
Sbjct: 229 VTPGSESKKV-SPQLIAEYTVRALQRTVPAAVPAIVFLSGGQSEEEATVNLNAMN 282
>08_01_0142 - 1121762-1122822,1123087-1123114
Length = 362
Score = 204 bits (497), Expect = 5e-53
Identities = 107/177 (60%), Positives = 123/177 (69%), Gaps = 2/177 (1%)
Frame = +1
Query: 4 VPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGR--NTPSYQAILENANVL 177
V L G++ E TTQG D L +RC +Y G FAKWR VL IGR + PS A+ NA L
Sbjct: 109 VELAGTDRETTTQGHDGLGERCRRYYAAGARFAKWRAVLSIGRASSRPSQLAVDANAQGL 168
Query: 178 ARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKP 357
ARYA ICQ +VPIVEPE+L DGEH ++ +VTE VLAA YKALSDHHV LEGTLLKP
Sbjct: 169 ARYAIICQENGLVPIVEPEILVDGEHGIEACAEVTERVLAACYKALSDHHVLLEGTLLKP 228
Query: 358 NMVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAIN 528
NMVT G + P +A TV ALLRTVP AVP + FLS GQSEEEA+ NLNA+N
Sbjct: 229 NMVTPGSDAARA-PPEVVAEHTVRALLRTVPPAVPAIVFLSGGQSEEEATRNLNAMN 284
>06_03_0718 +
23840198-23840409,23841368-23841518,23842190-23842294,
23843476-23843608,23844164-23844849,23844937-23845299
Length = 549
Score = 204 bits (497), Expect = 5e-53
Identities = 107/176 (60%), Positives = 121/176 (68%), Gaps = 1/176 (0%)
Frame = +1
Query: 4 VPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGR-NTPSYQAILENANVLA 180
V + G+ E TTQGLD L RCA+Y + G FAKWR VLKIG PS A+ +NA LA
Sbjct: 300 VDIAGTNGETTTQGLDSLGARCAKYYEAGARFAKWRAVLKIGAAGEPSELAVKQNAEGLA 359
Query: 181 RYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPN 360
RYA ICQ +VPIVEPE+L DG HD+ VTE VLAAVYK+L+DH V LEGTLLKPN
Sbjct: 360 RYALICQENGLVPIVEPEILTDGAHDIKTCAAVTERVLAAVYKSLNDHKVLLEGTLLKPN 419
Query: 361 MVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAIN 528
MVT G K + I TV AL RTVP AVPG+ FLS GQSEEEAS NLNA+N
Sbjct: 420 MVTPGSDSPKVGAEV-IGEYTVAALRRTVPPAVPGIVFLSGGQSEEEASQNLNAMN 474
>11_01_0448 -
3469398-3469676,3470015-3470284,3470386-3470476,
3470581-3470690,3470867-3471136,3471768-3471914
Length = 388
Score = 169 bits (411), Expect = 1e-42
Identities = 90/176 (51%), Positives = 115/176 (65%)
Frame = +1
Query: 1 VVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLA 180
+VPL GS +E QGLD LA R A Y + G FAKWR V+ I N PS A+ E A LA
Sbjct: 141 LVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVVSIP-NGPSELAVKEAAWGLA 199
Query: 181 RYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPN 360
RYA+I Q +VPIVEPE+L DGEH +DR +V + V A + +++++V EG LLKP+
Sbjct: 200 RYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAETFFYMAENNVMFEGILLKPS 259
Query: 361 MVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAIN 528
MVT G CK TP ++ T+ L R +P AVPG+ FLS GQSE EA+ NLNA+N
Sbjct: 260 MVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMN 315
>12_01_0448 +
3537661-3538018,3538920-3539047,3539740-3539763,
3542051-3542317,3542994-3543530
Length = 437
Score = 66.1 bits (154), Expect = 2e-11
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 211 IVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSCKK 390
+VPIVEPE+L DGEH ++R +V + V A + +S+++V LEG LLKP+MVT G K
Sbjct: 263 LVPIVEPEILLDGEHRVERTFEVAQKVWADTFFHMSENNVMLEGILLKPSMVTPGAESKD 322
Query: 391 -TYTPMDIARAT 423
TP +A A+
Sbjct: 323 GAATPEQVAAAS 334
>07_03_0473 -
18525712-18525858,18526049-18526162,18526442-18526522,
18526787-18526865,18526902-18526996,18527092-18527170,
18527339-18527450,18527682-18527770,18527868-18527938,
18528846-18528962
Length = 327
Score = 31.9 bits (69), Expect = 0.33
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 424 VTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAINS 531
+ AL R + AA+PG+ LS + E+ VNL + N+
Sbjct: 278 IKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSNA 313
>02_01_0286 + 1921049-1921726
Length = 225
Score = 31.5 bits (68), Expect = 0.44
Identities = 25/92 (27%), Positives = 33/92 (35%)
Frame = -3
Query: 334 GRRGGR*VPCIRQPVRLLSPSERGPSRARHQAKPQAQLLARYADSGRWRRSEPTHWHSPR 155
GRRGG + + + +RAR + P+ L R R RRS P
Sbjct: 12 GRRGGETEGDLAAAMPREETTMSAGARARRKGLPEETLTRRKERLVRRRRSLDESEGRPG 71
Query: 154 WLGTMECCGRSSIRNATWQSGSRPSCTERNAG 59
W T C GR R + R S + G
Sbjct: 72 WRATSPCQGRRRQRRPALRRDDRGSWRRHSGG 103
>07_03_1705 +
28848293-28848321,28848766-28848841,28848940-28849082,
28849297-28849383,28849492-28849575,28850224-28850380,
28850521-28850606,28850995-28851226,28851351-28851471,
28851610-28851746,28852086-28852202,28852612-28852660,
28852751-28852793,28852945-28853116,28853192-28853262,
28853365-28853458,28853608-28853820,28853851-28853859,
28853895-28853999,28854266-28854586,28854664-28854789
Length = 823
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 16 GSEDECTTQGLDDLAQRCAQYKKDGCH 96
GS+ EC + LD+L YKK+GC+
Sbjct: 794 GSKRECVVEMLDNLEGNFLVYKKNGCY 820
>08_01_0178 - 1509100-1511214
Length = 704
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 152 PSWRMPMCWLATPPS 196
P+W MPMC A PPS
Sbjct: 636 PTWSMPMCGSAAPPS 650
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -3
Query: 301 RQPVRLL--SPSERGPSR--ARHQAKPQAQLLARYADSGRWRRSEPTHWHS 161
R PVR SP PSR R +++ +++ RY + G +RR P H S
Sbjct: 453 RSPVRRYRGSPRASSPSRYPRRDRSRSRSRSPLRYRERGGYRRPSPRHSRS 503
>04_04_0920 + 29429114-29430934
Length = 606
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 130 RNTPSYQAILENANVLARYASICQSQRIVPIVEPEVLPDGEH 255
R TPS ++ LA + C P++EP+ LPD H
Sbjct: 18 RRTPSQTSLWTIRRQLASFVLHCSRSCASPLLEPKNLPDEFH 59
>02_03_0183 + 16106205-16106474
Length = 89
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +3
Query: 282 RSRTGCRIQGTQRPPRLP*GNPSQT*YGYRWSVVQEDLHSNGYRTRHCHRFTQDRTCRCP 461
RSR GC + + PP +P G+P+ R + L S+ H HRF++ C
Sbjct: 24 RSRRGCNEEMSWTPPSVP-GSPAAEGASLRAPTLPPPLASS-----HEHRFSRLHGCLPE 77
Query: 462 WSHFPL 479
S FP+
Sbjct: 78 SSGFPV 83
>07_03_1620 - 28180020-28180862
Length = 280
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 363 GYR-WSVVQEDLHSNGYRTRHCHRFTQDRTCRCPWSH 470
G+R W+ + ED + Y+ + C R + CP++H
Sbjct: 38 GHRLWASMSEDFWIHVYKVQRCPRSSSHDWTSCPYAH 74
>06_01_0191 +
1478267-1478929,1480579-1480789,1482625-1482925,
1483217-1483612,1483993-1484070,1484166-1484373
Length = 618
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +3
Query: 363 GYRWSVVQEDLHSNGYRTRHCHRFTQDRTCRCP---WSHFPLLWP 488
G RWS+ ++ YR RHC + R C P PL WP
Sbjct: 102 GQRWSL-RQPRRRFAYRERHCPPPAERRRCLVPAPRGYRAPLRWP 145
>03_05_0306 - 22956474-22956980
Length = 168
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = -3
Query: 205 DSGRW-RRSEPTHWHSPRWL 149
+ G W RR+ P W PRWL
Sbjct: 59 EHGAWSRRASPASWGEPRWL 78
>03_02_0461 - 8658494-8658876,8659791-8659859,8661746-8662187
Length = 297
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 250 EHDLDRAQKVTEVVLAAVYKALSDHH 327
E L+R V ++ LAA KA SDHH
Sbjct: 202 EDILNRTTTVEDISLAAASKATSDHH 227
>12_01_0839 + 7833111-7833380,7833925-7834161
Length = 168
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/54 (22%), Positives = 22/54 (40%)
Frame = -3
Query: 178 PTHWHSPRWLGTMECCGRSSIRNATWQSGSRPSCTERNAGPSHRDLEWCTRLQI 17
P+H H G + C +++ A W+S R P H + W +++
Sbjct: 43 PSHVHLEECGGALFMCYSQNLQTAVWESSLSMIWLWRPIAPRHAPICWIVEVRM 96
>08_02_0152 - 13304578-13305288
Length = 236
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 53 TWPSVALSTRRTAATLPSGVAY*RSAATLHRTKPSWRMPMCWLATP 190
+W SVA + R + PSG Y RS R + S MP L+ P
Sbjct: 11 SWRSVAHTPSRASVPTPSGYDYFRS--PFFRERSSGSMPTLLLSIP 54
>08_02_0147 - 13214179-13214889
Length = 236
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 53 TWPSVALSTRRTAATLPSGVAY*RSAATLHRTKPSWRMPMCWLATP 190
+W SVA + R + PSG Y RS R + S MP L+ P
Sbjct: 11 SWRSVAHTPSRASVPTPSGYDYFRS--LFFRERSSGSMPTLLLSIP 54
>03_06_0656 -
35330109-35331011,35331154-35331360,35331455-35331632,
35331726-35332221,35332889-35333033
Length = 642
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 295 PVRLLSPSERGPSRARHQAKPQAQLLARYADSG 197
P ++ S S+ S A QA+PQAQ L+ + SG
Sbjct: 552 PEKVQSQSQASSSPAPAQAQPQAQTLSSSSSSG 584
>01_06_0460 + 29545030-29546377,29546463-29547085
Length = 656
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 97 SGSRPSCTERNAGPSHRDLEWCTRLQI 17
+GS S N GP+ LEW TRL++
Sbjct: 441 NGSLHSLLHENRGPARVPLEWQTRLKL 467
>09_02_0562 - 10687827-10688126,10688228-10689022
Length = 364
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Frame = -1
Query: 390 LLARLTSGNHIRFEKGSL-----KVDVVVAECLVYGSQYDFC 280
++A+ S N+I+F G L DVV+ +C+++ Q+D C
Sbjct: 235 IVAKAPSNNNIQFVGGDLFEFIPAADVVLLKCILHCWQHDDC 276
>09_01_0010 - 270146-270568
Length = 140
Score = 27.1 bits (57), Expect = 9.4
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = -3
Query: 289 RLLSPSERGPSRARHQAKPQAQLLARYADSGRWRRSEPTHWHSPRWLGTMECCGRSSIRN 110
R +P+ R RA + + + A GRW R P H R G R+S N
Sbjct: 43 RYWTPTRRPLRRASGEEEVMPGMRAASRSRGRWWRRRPA--HGKRHSGGRR---RNSGGN 97
Query: 109 ATWQ-SGSRPSCTERNAG 59
AT G+ P + RN G
Sbjct: 98 ATVAGGGAPPGVSARNGG 115
>05_03_0060 - 7905455-7906216,7906723-7906887
Length = 308
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 376 QSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSCGQSEEEASVNLNA 522
+SC + +D+A A V A+ +T PAA+ + F C + S+ LN+
Sbjct: 17 RSCPQLELVVDMALAPVFAVDQTSPAALLRLFFHDCQVQGCDGSILLNS 65
>02_03_0174 +
15991418-15991888,15992007-15992126,15992763-15992801,
15994032-15994275,15994388-15994674
Length = 386
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = -1
Query: 477 EESDSRDSGRYGPE*SGDSGACDIHWSVSLLARLTSGNHIRFEKGSLKVDVVVAEC 310
++ D RD G GP + G+C WS S L N++ K + + + +C
Sbjct: 141 DDFDWRDHGAVGPV--KNQGSCGSCWSFSASGALEGANYLATGKMDVLSEQQMVDC 194
>02_02_0707 + 13144147-13144788,13145115-13148663
Length = 1396
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 187 ASICQSQRIVPIVEPEVLPDGEHDL 261
A+ Q +I P ++PEV PD E D+
Sbjct: 1352 ATWLQVNKIAPSLQPEVFPDSEGDV 1376
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,262,084
Number of Sequences: 37544
Number of extensions: 363709
Number of successful extensions: 1275
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1268
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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