Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_B01
(531 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0) 268 3e-72
SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0) 193 7e-50
SB_14578| Best HMM Match : Gal_Lectin (HMM E-Value=0.72) 33 0.14
SB_45705| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_53051| Best HMM Match : rve (HMM E-Value=1.3e-14) 28 4.1
SB_59124| Best HMM Match : Bac_luciferase (HMM E-Value=1.6) 28 5.4
SB_26078| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.45) 28 5.4
SB_47366| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_27853| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_1075| Best HMM Match : rve (HMM E-Value=0.0089) 27 9.5
SB_53071| Best HMM Match : TSP_1 (HMM E-Value=4.3e-05) 27 9.5
SB_47422| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_21616| Best HMM Match : RVT_1 (HMM E-Value=0.00011) 27 9.5
>SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 949
Score = 268 bits (656), Expect = 3e-72
Identities = 131/177 (74%), Positives = 146/177 (82%), Gaps = 1/177 (0%)
Frame = +1
Query: 1 VVPLFGSE-DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVL 177
VV L G++ E TTQGLD L +RCAQYKKDGC FAKWRCVLKI TPS A+ ENANVL
Sbjct: 110 VVVLAGTDAGETTTQGLDGLGERCAQYKKDGCDFAKWRCVLKITDYTPSELAMKENANVL 169
Query: 178 ARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKP 357
ARYASICQ +VPIVEPEVL DG+H L+RAQKVTE VL+A YKAL DHH+YLEGTLLKP
Sbjct: 170 ARYASICQQNGLVPIVEPEVLCDGDHTLERAQKVTEAVLSATYKALMDHHIYLEGTLLKP 229
Query: 358 NMVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAIN 528
NMVTAGQSC YTP A+ATVTAL RTVP A+PGVTFLS GQSEE+A+++LNAIN
Sbjct: 230 NMVTAGQSCPTKYTPEQCAQATVTALARTVPPAMPGVTFLSGGQSEEQATIHLNAIN 286
>SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 304
Score = 193 bits (471), Expect = 7e-50
Identities = 94/125 (75%), Positives = 103/125 (82%), Gaps = 1/125 (0%)
Frame = +1
Query: 1 VVPLFGSE-DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVL 177
VV L G++ E TTQGLD L +RCAQYKKDGC FAKWRCVLKI TPS A+ ENANVL
Sbjct: 110 VVVLAGTDAGETTTQGLDGLGERCAQYKKDGCDFAKWRCVLKITDYTPSELAMKENANVL 169
Query: 178 ARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKP 357
ARYASICQ +VPIVEPEVL DG+H L+RAQKVTE VL+A YKAL DHH+YLEGTLLKP
Sbjct: 170 ARYASICQQNGLVPIVEPEVLCDGDHTLERAQKVTEAVLSATYKALMDHHIYLEGTLLKP 229
Query: 358 NMVTA 372
NMVTA
Sbjct: 230 NMVTA 234
>SB_14578| Best HMM Match : Gal_Lectin (HMM E-Value=0.72)
Length = 502
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 364 VTAGQSCKKTYTPMDIARATVTALLRTV-PAAVPGVTFLSCGQSEEEASVNLNAINS 531
VT+ Q +T P + T T L+ V P PG T S QSE AS+ N+
Sbjct: 208 VTSSQFVSETVQPSTTSSETTTTTLKEVKPVETPGSTSSSTSQSEVSASIGTGTGNA 264
>SB_45705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 449
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -1
Query: 411 DIHWSVSLLAR-LTSGNHIRFEKGSLKVDVVVAECLVYGSQYDFCHLLSAVQVVLAIRQN 235
D+H + LA +T I E+ KV + + G+ CH L ++L++RQ
Sbjct: 94 DLHAKATQLANNVTDQQWIEAEEAKNKVYEEAVQVIPTGTNVTTCHSLDNANIILSVRQP 153
Query: 234 LRLNYWHDTLTLA 196
+ + DTL A
Sbjct: 154 VHQSV--DTLLYA 164
>SB_53051| Best HMM Match : rve (HMM E-Value=1.3e-14)
Length = 1624
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = -3
Query: 268 RGPSRARHQAKPQAQLLARYADSGRWR-RSEPTHWHSPRWLGTMECC--GRSSIRNATWQ 98
R SRA + +P +L G W+ +E T W ++ GR+S R+A
Sbjct: 1148 RRESRAPNHPRPDLNILGELKPEGSWQCGTELTEWRKRHFVSCSSRWPRGRASRRDARAC 1207
Query: 97 SGSRPSCTERNAGP 56
+ + PS R+ P
Sbjct: 1208 APTMPSARLRHTQP 1221
>SB_59124| Best HMM Match : Bac_luciferase (HMM E-Value=1.6)
Length = 1953
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 108 ALRIEDRPQHSIVPSHLGECQCVGSLRL-HL 197
A+++ + QH+ V S G+CQ G LRL HL
Sbjct: 111 AIQLPEPAQHNAVCSTSGKCQAGGELRLSHL 141
>SB_26078| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.45)
Length = 671
Score = 27.9 bits (59), Expect = 5.4
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
Frame = -3
Query: 319 R*VPCIRQPVRLLSPSERGPSRARHQAKPQAQLLARYADSGRWRRSEPTHWHSPRWLGTM 140
R VPC RL SPS P + + P A + ++ + S SPR G
Sbjct: 152 RSVPCSPASSRLASPSSSSPLASSSSSSPLASSSSSEGENEEEKNSALP--GSPRNYGLP 209
Query: 139 ECCGRSSIRNATWQSG-SRPSCTERNAGPS 53
+ G S W P+ T +NA PS
Sbjct: 210 KATGLS---KGKWSCNVMTPTKTGQNASPS 236
>SB_47366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 337 EGTLLKPNMVTAGQSCKKTYTPM 405
E L+KP MVTAG C K P+
Sbjct: 143 EVMLVKPQMVTAGIDCDKLIAPV 165
>SB_27853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 235 VLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPNM 363
V PDG+ R KVT++VL + ++ V+ +++K NM
Sbjct: 551 VSPDGQPRFPRLSKVTQLVLTIPHSNAAEERVF---SMIKKNM 590
>SB_1075| Best HMM Match : rve (HMM E-Value=0.0089)
Length = 1617
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 205 DSGRWRRSEPTHWHSPRWLGTMECCGRSSIRNATWQSGSRPS--CTERNAGPS 53
+S RW SEP++ + P+ L C GRSS T + P+ TE + PS
Sbjct: 198 ESRRWL-SEPSYGYWPQQLNLAVCPGRSSPSFLTMRLSPLPTPLATEESDLPS 249
>SB_53071| Best HMM Match : TSP_1 (HMM E-Value=4.3e-05)
Length = 755
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/55 (25%), Positives = 21/55 (38%)
Frame = -3
Query: 202 SGRWRRSEPTHWHSPRWLGTMECCGRSSIRNATWQSGSRPSCTERNAGPSHRDLE 38
+G W R WH W + CGR S A + C ++ SH ++
Sbjct: 211 TGFWARFPVPTWHVTEWDTCSKTCGRGSQSRAVF-------CRKKTTSSSHETID 258
>SB_47422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = -1
Query: 315 ECLVYGSQYDFCHLLSAVQVVLAIRQNLRLNYWHD 211
+C++YG + + L+A V+ + ++ +WHD
Sbjct: 167 DCIIYGLKAELPAYLAATADVVINTEERKVKWWHD 201
>SB_21616| Best HMM Match : RVT_1 (HMM E-Value=0.00011)
Length = 1380
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 159 GECQCVGSLRLHLPESAYRANS*A*GFA*WRARLGPRSEGDRSR-TGCRIQGTQRPPRL 332
G+CQ + + P N FA + +GPR+EG SR ++ G PPRL
Sbjct: 1260 GKCQDYVAFSANFPRIIRTDNEDL--FAAQQITVGPRTEGSNSRILRGKVAGITAPPRL 1316
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,205,339
Number of Sequences: 59808
Number of extensions: 410175
Number of successful extensions: 1111
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1191330434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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