Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_B01
         (531 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   1.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   1.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   1.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   1.9  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   2.6  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   2.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.6  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    22   4.5  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    22   4.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.5  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   5.9  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   5.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   7.9  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 73  ERNAGPSHRDLEWCT 29
           ERN+G + + + WCT
Sbjct: 376 ERNSGATDKIIRWCT 390


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 73  ERNAGPSHRDLEWCT 29
           ERN+G + + + WCT
Sbjct: 376 ERNSGATDKIIRWCT 390


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 73  ERNAGPSHRDLEWCT 29
           ERN+G + + + WCT
Sbjct: 376 ERNSGATDKIIRWCT 390


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -3

Query: 130 GRSSIRNATWQSGSRPSCTERNAGPS 53
           GR+ ++  +++  S P C+ +N  P+
Sbjct: 878 GRAILKIPSYKPASTPGCSSKNGEPT 903


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 283 LSPSERGPSRARHQAKPQAQ 224
           L P  R P+R R +AKP+A+
Sbjct: 22  LDPPTR-PTRLRREAKPEAE 40


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 283 LSPSERGPSRARHQAKPQAQ 224
           L P  R P+R R +AKP+A+
Sbjct: 23  LDPPTR-PARLRREAKPEAE 41


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = +3

Query: 117 IEDRPQHSIVPSHLG 161
           +ED PQ+S++P+ +G
Sbjct: 393 LEDAPQNSLLPNFVG 407


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 251 STTWTALRR*QKSYWL 298
           S +W A+   Q S+WL
Sbjct: 308 SNSWVAINELQDSFWL 323


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 251 STTWTALRR*QKSYWL 298
           S +W A+   Q S+WL
Sbjct: 276 SNSWVAINELQDSFWL 291


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 267 RSEGDRSRTGCRIQGTQRPPRL 332
           RSEGD ++    +Q    PP L
Sbjct: 403 RSEGDTAQASAELQLGNAPPML 424


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = +3

Query: 249 RARLGPRSEGDRSRTGCRIQGTQRPPRLP 335
           RA  G  S GD       +  T +PP+ P
Sbjct: 541 RANSGSTSSGDDELHRASLSKTPQPPQCP 569


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 267 RSEGDRSRTGCRIQGTQRPPRL 332
           RSEGD ++    +Q    PP L
Sbjct: 403 RSEGDTAQASAELQLGNAPPML 424


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 314 SATTTSTLREPFSNLIWL 367
           S+T  S L +PFSN +W+
Sbjct: 554 SSTLVSFL-QPFSNTLWI 570


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +1

Query: 340 GTLLKPNMVTAGQSCKKTYTPMDIARATVTALLRTVPAAVP 462
           GT+       A  +  K  TP  +A  + TA     P +VP
Sbjct: 18  GTIASVVAGAASLTLVKAETPEHLAGTSTTAAATPTPPSVP 58


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = -3

Query: 295 PVRLLSPSERGPSRARHQAKPQAQLLARYADSGRWRR 185
           P     PS  GP R R   K    L     D G  RR
Sbjct: 440 PTMPTMPSMAGPIRRRISDKSALSLAGGLYDEGTVRR 476


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,767
Number of Sequences: 438
Number of extensions: 3196
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)