Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_B01
(531 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putativ... 225 2e-59
At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putativ... 221 2e-58
At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putativ... 221 2e-58
At3g52930.1 68416.m05834 fructose-bisphosphate aldolase, putativ... 218 2e-57
At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putativ... 216 7e-57
At4g26520.1 68417.m03820 fructose-bisphosphate aldolase, cytopla... 204 2e-53
At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putativ... 173 8e-44
At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putativ... 169 1e-42
At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putativ... 167 4e-42
At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putativ... 146 8e-36
At2g44610.1 68415.m05553 Ras-related GTP-binding protein, putati... 31 0.48
At2g44980.2 68415.m05601 transcription regulatory protein SNF2, ... 29 1.5
At2g44980.1 68415.m05600 transcription regulatory protein SNF2, ... 29 1.5
At4g10430.3 68417.m01715 expressed protein 29 2.0
At4g10430.2 68417.m01713 expressed protein 29 2.0
At4g10430.1 68417.m01714 expressed protein 29 2.0
At3g17611.2 68416.m02250 rhomboid family protein / zinc finger p... 29 2.0
At3g17611.1 68416.m02249 rhomboid family protein / zinc finger p... 29 2.0
At5g35210.2 68418.m04175 peptidase M50 family protein / sterol-r... 28 3.4
At5g35210.1 68418.m04174 peptidase M50 family protein / sterol-r... 28 3.4
At5g16900.1 68418.m01981 leucine-rich repeat protein kinase, put... 28 3.4
At3g13672.2 68416.m01724 seven in absentia (SINA) family protein... 28 3.4
At3g13672.1 68416.m01723 seven in absentia (SINA) family protein... 28 3.4
At2g24350.1 68415.m02910 RNA recognition motif (RRM)-containing ... 27 6.0
At1g24420.1 68414.m03077 transferase family protein similar to d... 27 6.0
At5g44790.1 68418.m05491 copper-exporting ATPase / responsive-to... 27 7.9
At1g35240.1 68414.m04370 transcriptional factor B3 family protei... 27 7.9
>At4g26530.1 68417.m03822 fructose-bisphosphate aldolase, putative
strong similarity to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 225 bits (549), Expect = 2e-59
Identities = 115/176 (65%), Positives = 126/176 (71%)
Frame = +1
Query: 1 VVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLA 180
VV L G+ E TTQGLD L RC +Y K G FAKWR VLKIG PS +I ENA LA
Sbjct: 108 VVDLAGTNGETTTQGLDSLGARCQEYYKAGARFAKWRAVLKIGATEPSELSIQENAKGLA 167
Query: 181 RYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPN 360
RYA ICQ +VPIVEPEVL DG HD+ + VTE VLAAVYKAL+DHHV LEGTLLKPN
Sbjct: 168 RYAIICQENGLVPIVEPEVLTDGSHDIKKCAAVTETVLAAVYKALNDHHVLLEGTLLKPN 227
Query: 361 MVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAIN 528
MVT G K P IA TVTAL RTVP AVPG+ FLS GQSEEEA++NLNA+N
Sbjct: 228 MVTPGSDSPKV-APEVIAEYTVTALRRTVPPAVPGIVFLSGGQSEEEATLNLNAMN 282
>At5g03690.2 68418.m00329 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 359
Score = 221 bits (540), Expect = 2e-58
Identities = 114/175 (65%), Positives = 124/175 (70%)
Frame = +1
Query: 4 VPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLAR 183
V L G+ E TT GLD L RC +Y + G FAKWR VLKIG N PS AI ENA LAR
Sbjct: 109 VELAGTNGETTTTGLDGLGDRCKKYYEAGARFAKWRAVLKIGNNEPSELAIHENAYGLAR 168
Query: 184 YASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPNM 363
YA ICQ +VPIVEPE+L DG HD+++ VTE VLAA YKALSDHHV LEGTLLKPNM
Sbjct: 169 YAVICQENGLVPIVEPEILVDGSHDIEKCAYVTERVLAACYKALSDHHVILEGTLLKPNM 228
Query: 364 VTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAIN 528
VT G P IA+ TV AL RTVPAAVP V FLS GQSEEEA+VNLNAIN
Sbjct: 229 VTPGSDSGSKVKPEVIAKHTVRALQRTVPAAVPAVVFLSGGQSEEEATVNLNAIN 283
>At5g03690.1 68418.m00328 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 393
Score = 221 bits (540), Expect = 2e-58
Identities = 114/175 (65%), Positives = 124/175 (70%)
Frame = +1
Query: 4 VPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLAR 183
V L G+ E TT GLD L RC +Y + G FAKWR VLKIG N PS AI ENA LAR
Sbjct: 143 VELAGTNGETTTTGLDGLGDRCKKYYEAGARFAKWRAVLKIGNNEPSELAIHENAYGLAR 202
Query: 184 YASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPNM 363
YA ICQ +VPIVEPE+L DG HD+++ VTE VLAA YKALSDHHV LEGTLLKPNM
Sbjct: 203 YAVICQENGLVPIVEPEILVDGSHDIEKCAYVTERVLAACYKALSDHHVILEGTLLKPNM 262
Query: 364 VTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAIN 528
VT G P IA+ TV AL RTVPAAVP V FLS GQSEEEA+VNLNAIN
Sbjct: 263 VTPGSDSGSKVKPEVIAKHTVRALQRTVPAAVPAVVFLSGGQSEEEATVNLNAIN 317
>At3g52930.1 68416.m05834 fructose-bisphosphate aldolase, putative
similar to SP|O65735|ALF_CICAR Fructose-bisphosphate
aldolase, cytoplasmic isozyme {Cicer arietinum},
cytosolic aldolase [Fragaria x ananassa] GI:10645188;
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 218 bits (532), Expect = 2e-57
Identities = 112/175 (64%), Positives = 125/175 (71%)
Frame = +1
Query: 4 VPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLAR 183
V L G++ E TTQGLD L RC +Y + G FAKWR VLKIG N PS +I ENA LAR
Sbjct: 109 VELAGTDGETTTQGLDGLGDRCKKYYEAGARFAKWRAVLKIGENEPSEHSIHENAYGLAR 168
Query: 184 YASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPNM 363
YA ICQ +VPIVEPE+L DG HD+ + VTE VLAA YKALSDHHV LEGTLLKPNM
Sbjct: 169 YAVICQENGLVPIVEPEILVDGSHDIQKCAAVTERVLAACYKALSDHHVLLEGTLLKPNM 228
Query: 364 VTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAIN 528
VT G K +P IA TV AL RTVPAAVP + FLS GQSEEEA+ NLNA+N
Sbjct: 229 VTPGSDSPKV-SPEVIAEHTVRALQRTVPAAVPAIVFLSGGQSEEEATRNLNAMN 282
>At2g36460.1 68415.m04475 fructose-bisphosphate aldolase, putative
similar to PIR|S65073 fructose-bisphosphate aldolase (EC
4.1.2.13) isoenzyme C-1, cytosolic [Oryza sativa];
contains Pfam profile PF00274 Fructose-bisphosphate
aldolase class-I
Length = 358
Score = 216 bits (528), Expect = 7e-57
Identities = 113/175 (64%), Positives = 123/175 (70%)
Frame = +1
Query: 4 VPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLAR 183
V L G+ E TTQGLD L RC +Y + G FAKWR VLKIG N PS AI ENA LAR
Sbjct: 109 VELAGTNGETTTQGLDGLGDRCKKYYEAGARFAKWRAVLKIGVNEPSQLAIHENAYGLAR 168
Query: 184 YASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPNM 363
YA ICQ +VPIVEPE+L DG HD+ + VTE VLAA YKALSDHHV LEGTLLKPNM
Sbjct: 169 YAVICQENGLVPIVEPEILVDGSHDIQKCAAVTERVLAACYKALSDHHVLLEGTLLKPNM 228
Query: 364 VTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAIN 528
VT G K P IA TV AL RTVPAAVP + FLS GQSEEEA+ NLNA+N
Sbjct: 229 VTPGSESAKV-APEVIAEHTVRALQRTVPAAVPAIVFLSGGQSEEEATRNLNAMN 282
>At4g26520.1 68417.m03820 fructose-bisphosphate aldolase,
cytoplasmic identical to SP|P22197 Fructose-bisphosphate
aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis
thaliana}
Length = 358
Score = 204 bits (499), Expect = 2e-53
Identities = 105/176 (59%), Positives = 121/176 (68%)
Frame = +1
Query: 1 VVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLA 180
+V L G+ E TTQGLD L RC QY + G FAKWR KIG PS +I E+A VLA
Sbjct: 108 LVDLAGTNGETTTQGLDSLGARCQQYYEAGARFAKWRAFFKIGATEPSVLSIQEDARVLA 167
Query: 181 RYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPN 360
RYA ICQ +VPIVEPEVL G HD+ + VTE VLAAV+KAL+ HHV LEGTLLKPN
Sbjct: 168 RYAIICQENGLVPIVEPEVLTGGSHDIKKCAAVTETVLAAVFKALNYHHVLLEGTLLKPN 227
Query: 361 MVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAIN 528
MVT G K P IA TVTAL RTVP A+PG+ FLS Q EE+A++NLNA+N
Sbjct: 228 MVTPGSDSPKV-APELIAEYTVTALRRTVPPAIPGIVFLSGIQREEQATLNLNAMN 282
>At4g38970.1 68417.m05521 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 398
Score = 173 bits (420), Expect = 8e-44
Identities = 93/176 (52%), Positives = 114/176 (64%)
Frame = +1
Query: 1 VVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLA 180
+VPL GS +E QGLD L+ R A Y + G FAKWR V+ I N PS A+ E A LA
Sbjct: 151 LVPLVGSNNESWCQGLDGLSSRTAAYYQQGARFAKWRTVVSIP-NGPSALAVKEAAWGLA 209
Query: 181 RYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPN 360
RYA+I Q +VPIVEPE+L DGEHD+DR V E V A V+ L+ ++V EG LLKP+
Sbjct: 210 RYAAISQDSGLVPIVEPEILLDGEHDIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPS 269
Query: 361 MVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAIN 528
MVT G K TP +A T+ L VP AVPG+ FLS GQSE EA++NLNA+N
Sbjct: 270 MVTPGAESKDRATPEQVAAYTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMN 325
>At2g21330.1 68415.m02538 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 399
Score = 169 bits (410), Expect = 1e-42
Identities = 91/176 (51%), Positives = 112/176 (63%)
Frame = +1
Query: 1 VVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLA 180
+VPL GS DE QGLD LA R A Y + G FAKWR V+ I N PS A+ E A LA
Sbjct: 152 LVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIP-NGPSALAVKEAAWGLA 210
Query: 181 RYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPN 360
RYA+I Q +VPIVEPE++ DGEH +DR V E V A V+ L+ ++V EG LLKP+
Sbjct: 211 RYAAISQDSGLVPIVEPEIMLDGEHGIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPS 270
Query: 361 MVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAIN 528
MVT G TP +A T+ L +P AVPG+ FLS GQSE EA++NLNA+N
Sbjct: 271 MVTPGAEATDRATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMN 326
>At2g01140.1 68415.m00023 fructose-bisphosphate aldolase, putative
similar to plastidic aldolase NPALDP1 from Nicotiana
paniculata [GI:4827251]; contains Pfam profile PF00274
Fructose-bisphosphate aldolase class-I
Length = 391
Score = 167 bits (406), Expect = 4e-42
Identities = 89/174 (51%), Positives = 114/174 (65%)
Frame = +1
Query: 7 PLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLARY 186
PL GS +E QGLD LA R A+Y K G FAKWR V+ + PS A+ E A LARY
Sbjct: 146 PLAGSNEESWCQGLDGLASRSAEYYKQGARFAKWRTVVSVPCG-PSALAVKEAAWGLARY 204
Query: 187 ASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPNMV 366
A+I Q +VPIVEPE+L DG+H ++R +V E V + V+ L+ ++V EG LLKP+MV
Sbjct: 205 AAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVMFEGILLKPSMV 264
Query: 367 TAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAIN 528
T G K +P +A T+T L R VP AVPG+ FLS GQSE EA++NLNA+N
Sbjct: 265 TPGAEHKNKASPETVADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMN 318
>At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 381
Score = 146 bits (354), Expect = 8e-36
Identities = 79/156 (50%), Positives = 97/156 (62%)
Frame = +1
Query: 1 VVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLA 180
+VPL GS +E QGLD L+ R A Y + G FAKWR V+ I N PS A+ E A LA
Sbjct: 151 LVPLVGSNNESWCQGLDGLSSRTAAYYQQGARFAKWRTVVSIP-NGPSALAVKEAAWGLA 209
Query: 181 RYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPN 360
RYA+I Q +VPIVEPE+L DGEHD+DR V E V A V+ L+ ++V EG LLKP+
Sbjct: 210 RYAAISQDSGLVPIVEPEILLDGEHDIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPS 269
Query: 361 MVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGV 468
MVT G K TP +A T+ L VP AVPG+
Sbjct: 270 MVTPGAESKDRATPEQVAAYTLKLLRNRVPPAVPGI 305
>At2g44610.1 68415.m05553 Ras-related GTP-binding protein, putative
similar to GTP-binding protein GI:623586 from [Nicotiana
tabacum] ; contains an ADP-ribosylation factors family
signature for proteins involved in protein trafficking
Length = 208
Score = 31.1 bits (67), Expect = 0.48
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 424 VTALLRTVPAAVPGVTFLSCGQSEEEASVNLNAINS 531
+ AL R + AA+PG+ LS + E+ VNL + N+
Sbjct: 159 IKALFRKIAAALPGMETLSSTKQEDMVDVNLKSSNA 194
>At2g44980.2 68415.m05601 transcription regulatory protein SNF2,
putative similar to SNF2P [Oryza sativa (japonica
cultivar-group)] GI:23193483; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain; CG donor site annotated
in one isoform based on protein alignments.
Length = 870
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 169 NVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSD--HHVYL 336
N++ + C + P +EPE +GEH + + K+ +VL + K L D H V L
Sbjct: 343 NIVIQLRKACSHPYLFPGIEPEPFEEGEHLVQASGKL--LVLDQLLKRLHDSGHRVLL 398
>At2g44980.1 68415.m05600 transcription regulatory protein SNF2,
putative similar to SNF2P [Oryza sativa (japonica
cultivar-group)] GI:23193483; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain; CG donor site annotated
in one isoform based on protein alignments.
Length = 851
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 169 NVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSD--HHVYL 336
N++ + C + P +EPE +GEH + + K+ +VL + K L D H V L
Sbjct: 334 NIVIQLRKACSHPYLFPGIEPEPFEEGEHLVQASGKL--LVLDQLLKRLHDSGHRVLL 389
>At4g10430.3 68417.m01715 expressed protein
Length = 347
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -3
Query: 160 PRWLGTMECCGRSSIRNATWQSGSRPSCTERNAGPSHRDLEW 35
P WL C ++ + TW+ +P+C ++ G H L+W
Sbjct: 185 PWWLYHHYCAMAMALVSLTWEIKGQPNCVQKQRG-VHLFLQW 225
>At4g10430.2 68417.m01713 expressed protein
Length = 271
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -3
Query: 160 PRWLGTMECCGRSSIRNATWQSGSRPSCTERNAGPSHRDLEW 35
P WL C ++ + TW+ +P+C ++ G H L+W
Sbjct: 109 PWWLYHHYCAMAMALVSLTWEIKGQPNCVQKQRG-VHLFLQW 149
>At4g10430.1 68417.m01714 expressed protein
Length = 347
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -3
Query: 160 PRWLGTMECCGRSSIRNATWQSGSRPSCTERNAGPSHRDLEW 35
P WL C ++ + TW+ +P+C ++ G H L+W
Sbjct: 185 PWWLYHHYCAMAMALVSLTWEIKGQPNCVQKQRG-VHLFLQW 225
>At3g17611.2 68416.m02250 rhomboid family protein / zinc finger
protein-related contains Pfam profiles PF01694: Rhomboid
family, PF00641: Zn-finger in Ran binding protein and
others
Length = 239
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = -3
Query: 208 ADSGRWRRSEPTHWHSPRWLGTMECCGRSSIRNATWQSGSRPSCTERNAGP 56
A G WR T+ +S WL E CG R W P+ + N P
Sbjct: 177 AGPGIWRCQSCTYDNSG-WLSACEMCGSGRARGNGWSLNQGPALSSSNDLP 226
>At3g17611.1 68416.m02249 rhomboid family protein / zinc finger
protein-related contains Pfam profiles PF01694: Rhomboid
family, PF00641: Zn-finger in Ran binding protein and
others
Length = 334
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = -3
Query: 208 ADSGRWRRSEPTHWHSPRWLGTMECCGRSSIRNATWQSGSRPSCTERNAGP 56
A G WR T+ +S WL E CG R W P+ + N P
Sbjct: 272 AGPGIWRCQSCTYDNSG-WLSACEMCGSGRARGNGWSLNQGPALSSSNDLP 321
>At5g35210.2 68418.m04175 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains PFam PF02163:
sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 1409
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/70 (25%), Positives = 27/70 (38%)
Frame = -3
Query: 295 PVRLLSPSERGPSRARHQAKPQAQLLARYADSGRWRRSEPTHWHSPRWLGTMECCGRSSI 116
PV L P RGP R + + + ADS W R + + + +
Sbjct: 836 PVTLGVPQRRGPGRTKQNTQAEVTAEGSDADSFTWWRGGKL----SKVILLKAVLSQPAT 891
Query: 115 RNATWQSGSR 86
+ A WQ GS+
Sbjct: 892 KKAAWQGGSK 901
>At5g35210.1 68418.m04174 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains PFam PF02163:
sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 1576
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/70 (25%), Positives = 27/70 (38%)
Frame = -3
Query: 295 PVRLLSPSERGPSRARHQAKPQAQLLARYADSGRWRRSEPTHWHSPRWLGTMECCGRSSI 116
PV L P RGP R + + + ADS W R + + + +
Sbjct: 836 PVTLGVPQRRGPGRTKQNTQAEVTAEGSDADSFTWWRGGKL----SKVILLKAVLSQPAT 891
Query: 115 RNATWQSGSR 86
+ A WQ GS+
Sbjct: 892 KKAAWQGGSK 901
>At5g16900.1 68418.m01981 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 866
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +1
Query: 115 VLKIGRNTPSYQAILENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVL 294
+L+I N P + EN ++ R ++ I IV+P ++ GE+D +K ++ +
Sbjct: 765 LLEIITNQPVLEQANENRHIAERVRTMLTRSDISTIVDPNLI--GEYDSGSVRKALKLAM 822
Query: 295 AAV 303
+ V
Sbjct: 823 SCV 825
>At3g13672.2 68416.m01724 seven in absentia (SINA) family protein
low similarity to SP|P21461 Developmental protein seven
in absentia {Drosophila melanogaster}; contains Pfam
profile PF03145: Seven in absentia protein family
Length = 220
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 202 SGRWRRSEPTHWHSPRWLGT-MECCGR 125
S R+ +P H H W+ T ++CCGR
Sbjct: 88 SHRYVHHDPKHLHHATWMLTLLDCCGR 114
>At3g13672.1 68416.m01723 seven in absentia (SINA) family protein
low similarity to SP|P21461 Developmental protein seven
in absentia {Drosophila melanogaster}; contains Pfam
profile PF03145: Seven in absentia protein family
Length = 216
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 202 SGRWRRSEPTHWHSPRWLGT-MECCGR 125
S R+ +P H H W+ T ++CCGR
Sbjct: 84 SHRYVHHDPKHLHHATWMLTLLDCCGR 110
>At2g24350.1 68415.m02910 RNA recognition motif (RRM)-containing
protein low similarity to poly(A) binding protein II
from [Xenopus laevis] GI:11527140, [Mus musculus]
GI:2351846, [Bos taurus] GI:1051125; contains
INTERPRO:IPR000504 RNA-binding region RNP-1 (RNA
recognition motif) domain
Length = 537
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 310 PCIRQPVRL-LSPSERGPSRARHQAKPQAQLLARYADSGR 194
PC R P + S +ER + + P+ +L +R+A SGR
Sbjct: 199 PCDRNPAKYEKSMNERSRTLKKRPYSPERELDSRFAPSGR 238
>At1g24420.1 68414.m03077 transferase family protein similar to
deacetylvindoline 4-O-acetyltransferase [Catharanthus
roseus][GI:4091808][PMID:9681034],
acetyl-CoA:benzylalcohol acetyltranferase [Clarkia
concinna][GI:6166330][PMID:10588064]
Length = 436
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +1
Query: 106 WRCVLKIGR---NTPSYQAILENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQK 276
WRCV K+ R TP + N+ + S+C++ I ++ +L + E ++R Q
Sbjct: 254 WRCVTKVSRLSSLTPRTSVLQILVNLRGKVDSLCEN-TIGNMLSLMILKNEEAAIERIQD 312
Query: 277 VTEVVLAA 300
V + + A
Sbjct: 313 VVDEIRRA 320
>At5g44790.1 68418.m05491 copper-exporting ATPase /
responsive-to-antagonist 1 / copper-transporting ATPase
(RAN1) identical to SP|Q9S7J8
Length = 1001
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 436 LRTVPAAVPGVTFLSCGQSEEEASVNLNAI 525
LR + V G+T +C S E A +N+N +
Sbjct: 55 LRKIQVGVTGMTCAACSNSVEAALMNVNGV 84
>At1g35240.1 68414.m04370 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362: B3 DNA
binding domain
Length = 615
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 378 VVQEDLHSNGYRTRHCHRFTQDR-TCRCPWSHF 473
++ +DLH N +R RH +R T R + W+ F
Sbjct: 166 LLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEF 198
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,370,395
Number of Sequences: 28952
Number of extensions: 263646
Number of successful extensions: 850
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 987020800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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