Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_A23
         (429 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   2.0  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   2.6  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   4.6  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 15/64 (23%), Positives = 30/64 (46%)
 Frame = +1

Query: 103 LKNLFVS*HPDSPISFGGESTSPGAVATLESIGNLGVKENKEIANEVSAFVEKELGIKKD 282
           L + F    P+   +   E T P A++    I      +N+   ++   ++ + +G KKD
Sbjct: 49  LSDEFTHLRPEQRQALLHEGTGPRAMSAYVEI-IFDNSDNRVPIDKEEIYLRRVIGAKKD 107

Query: 283 RFFL 294
           ++FL
Sbjct: 108 QYFL 111


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 17/56 (30%), Positives = 22/56 (39%)
 Frame = -2

Query: 272  IPSSFSTNADTSFAISLFSLTPKFPIDSRVATAPGLVDSPPNDIGLSGCYDTNKFF 105
            IPS F    DT F+  L      F ID +      LVD   + I     Y  + +F
Sbjct: 2042 IPSQFPVQEDTQFSQLLSESLDFFGIDEKKHAQHVLVDYKSHQILNPNWYVRDLYF 2097


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 30  PKTKIPVDFVNKIIPVLSKTVKKVP 104
           P +K+PV     I+P+L+   + +P
Sbjct: 43  PASKMPVSVFGDILPILTGPDRPIP 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,392
Number of Sequences: 2352
Number of extensions: 6954
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)