Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_A23
         (429 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132860-2|CAB60512.1|  117|Caenorhabditis elegans Hypothetical ...    46   2e-05
Z78012-2|CAB01412.1|  120|Caenorhabditis elegans Hypothetical pr...    42   1e-04
AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical...    30   0.61 
Z97628-3|CAB10727.1|  819|Caenorhabditis elegans Hypothetical pr...    26   10.0 
Z81524-7|CAD54142.2|  597|Caenorhabditis elegans Hypothetical pr...    26   10.0 
Z81050-15|CAN86587.1|  597|Caenorhabditis elegans Hypothetical p...    26   10.0 
Z79755-13|CAB02114.1|  819|Caenorhabditis elegans Hypothetical p...    26   10.0 
AF025458-4|AAB70975.4|  374|Caenorhabditis elegans Hypothetical ...    26   10.0 

>AL132860-2|CAB60512.1|  117|Caenorhabditis elegans Hypothetical
           protein Y56A3A.3 protein.
          Length = 117

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
 Frame = +1

Query: 127 HPDSPISFGGESTSPGAVATLESIGNLG-VKENKEIANEVSAFVEKELGIKKDRFFLTFY 303
           H D  I + G +T P   A L+SIG +G  K+N  I+  V   +EK LGI  +R ++ F 
Sbjct: 44  HEDQGILYAG-TTEPAGFAVLKSIGGVGSAKQNNAISAVVFPIIEKHLGIPGNRLYIEFV 102

Query: 304 DVLNYNVAKGGIT 342
           ++   ++A  G T
Sbjct: 103 NLGAADIAYNGQT 115


>Z78012-2|CAB01412.1|  120|Caenorhabditis elegans Hypothetical
           protein C52E4.2 protein.
          Length = 120

 Score = 42.3 bits (95), Expect = 1e-04
 Identities = 20/64 (31%), Positives = 35/64 (54%)
 Frame = +1

Query: 154 GESTSPGAVATLESIGNLGVKENKEIANEVSAFVEKELGIKKDRFFLTFYDVLNYNVAKG 333
           G +  P  V +++SIG +  ++N      ++ F  KELG+ KD+  +TF+D+    V   
Sbjct: 51  GATHDPVTVISIKSIGAVSAEDNIRNTAAITEFCGKELGLPKDKVVITFHDLPPATVGFN 110

Query: 334 GITI 345
           G T+
Sbjct: 111 GTTV 114


>AL032637-11|CAA21622.3| 1119|Caenorhabditis elegans Hypothetical
           protein Y43F8C.12 protein.
          Length = 1119

 Score = 30.3 bits (65), Expect = 0.61
 Identities = 19/44 (43%), Positives = 22/44 (50%)
 Frame = -1

Query: 390 SIFTGSLKELWFN*IDGDAAFRDVVVQDIVESKEKSVLFNTEFL 259
           S F   L   WFN I    A RD+ + DI E  E+S    TEFL
Sbjct: 212 SSFLNRLTLWWFNSIPWTGARRDLEIDDIFELNERS---GTEFL 252


>Z97628-3|CAB10727.1|  819|Caenorhabditis elegans Hypothetical
           protein F43G9.12 protein.
          Length = 819

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 133 DSPISFGGESTSPGAVATLESIGNLGVKENKEIANEVSAFVEK 261
           DS +  GG ++    + TLE I     K  +    E+  F+EK
Sbjct: 774 DSLLKMGGRTSFRQLIGTLELIAEEQSKAGRSFHKEIRKFLEK 816


>Z81524-7|CAD54142.2|  597|Caenorhabditis elegans Hypothetical
           protein F32H5.7 protein.
          Length = 597

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +2

Query: 371 RLPVKIEKIHRYRRNAQ 421
           R+PVK+E+  R RRN+Q
Sbjct: 64  RIPVKVEESFRLRRNSQ 80


>Z81050-15|CAN86587.1|  597|Caenorhabditis elegans Hypothetical
           protein F32H5.7 protein.
          Length = 597

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +2

Query: 371 RLPVKIEKIHRYRRNAQ 421
           R+PVK+E+  R RRN+Q
Sbjct: 64  RIPVKVEESFRLRRNSQ 80


>Z79755-13|CAB02114.1|  819|Caenorhabditis elegans Hypothetical
           protein F43G9.12 protein.
          Length = 819

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 133 DSPISFGGESTSPGAVATLESIGNLGVKENKEIANEVSAFVEK 261
           DS +  GG ++    + TLE I     K  +    E+  F+EK
Sbjct: 774 DSLLKMGGRTSFRQLIGTLELIAEEQSKAGRSFHKEIRKFLEK 816


>AF025458-4|AAB70975.4|  374|Caenorhabditis elegans Hypothetical
           protein C01B12.2 protein.
          Length = 374

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -2

Query: 278 FLIPSSFSTNADTSFAISLFSLTPKFPIDSRVATAPGLVDSPPND 144
           F++PSS STN D     SL +  P   + S+   A   ++  PND
Sbjct: 312 FILPSSVSTNVDGQ--SSLDAQLPVQHLPSKEMKAVDPIEKSPND 354


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,794,144
Number of Sequences: 27780
Number of extensions: 163301
Number of successful extensions: 457
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)