Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_A21
(240 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0798 + 7026509-7029272,7031573-7031994 27 1.6
05_06_0124 - 25822176-25822633,25822738-25825420 27 2.1
05_01_0498 + 4152729-4152820,4153316-4153425,4153840-4153877,415... 27 2.1
03_05_0532 - 25322822-25322932,25323018-25323050,25323187-253232... 27 2.8
04_04_0261 + 24007790-24009098,24009191-24011118 26 3.7
02_05_0029 - 25194827-25195095,25195129-25197970 26 3.7
11_06_0115 + 20288220-20288303,20289223-20289706,20290160-202903... 26 4.9
07_01_1045 + 9131301-9131483,9131652-9131717,9132433-9132513,913... 26 4.9
11_01_0467 + 3621266-3621401,3621531-3622699,3622815-3623128,362... 25 6.5
08_02_0238 + 14665813-14668798,14669088-14669125 25 6.5
05_06_0174 - 26149663-26149885,26150353-26151701 25 6.5
04_04_1666 + 35202970-35203163,35203615-35203677,35204834-35205815 25 6.5
01_01_0433 + 3282195-3285185 25 6.5
11_06_0128 - 20389375-20389781,20389988-20392787 25 8.5
06_01_0211 + 1604799-1605037,1605420-1605575,1605972-1606043,160... 25 8.5
02_05_0226 + 26971851-26972034,26972734-26972834,26972876-269729... 25 8.5
02_01_0426 + 3113443-3114220,3119557-3119693,3119831-3120817 25 8.5
>11_01_0798 + 7026509-7029272,7031573-7031994
Length = 1061
Score = 27.5 bits (58), Expect = 1.6
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -1
Query: 171 LMLANAIYSGVLPSAVSSIAIIKTCNLFLNK 79
L L+N +G +P+ ++S+ ++ NLFLN+
Sbjct: 303 LDLSNNALTGEVPATLASLTSLRLLNLFLNR 333
>05_06_0124 - 25822176-25822633,25822738-25825420
Length = 1046
Score = 27.1 bits (57), Expect = 2.1
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1
Query: 189 GKLSLNLMLANAIYSGVLPSAVSSIAIIKTCNLFLNK*THNLQQKSK*ITSV 34
GK L L N ++GV+P+AVS + +K L N+ T + +TS+
Sbjct: 148 GKNLTYLALNNNNFTGVIPAAVSKLKNLKVFTLNCNQLTGTIPAALGELTSL 199
>05_01_0498 +
4152729-4152820,4153316-4153425,4153840-4153877,
4154335-4154433,4154461-4157475
Length = 1117
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = -1
Query: 174 NLMLANAIYSGVLPSAVSSIAIIKTCNLFLNK*THNLQQKSK*ITSVNLV 25
+L LAN +SGV+P + +++ + NL N+ T + ++ ++ + +V
Sbjct: 375 SLNLANNQFSGVIPPEIGNLSGLTYLNLLGNRLTGGIPEELNRLSQLQVV 424
>03_05_0532 -
25322822-25322932,25323018-25323050,25323187-25323222,
25323301-25323336,25323431-25323479,25323671-25323762,
25323899-25323984,25324098-25324261,25325573-25325601,
25325697-25325807,25326471-25326512,25326597-25326647,
25326848-25326898,25327325-25327382,25327823-25327908,
25328008-25328056,25328155-25328273,25328504-25328590,
25328726-25328787,25329222-25329290,25329884-25330133
Length = 556
Score = 26.6 bits (56), Expect = 2.8
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +2
Query: 35 TEVIYLLFCCRLCVYLFRNRLQ---VFIIAMELTAEGKTPEYMALASIKFKLSLPHLKDN 205
T + L+ CCR + + RN+ + +F I + TP + A + K S+ HL +
Sbjct: 201 TNTLGLMICCREAINMMRNQPRGGHIFNIDGAGSDGRPTPRFAAYGAT--KRSVVHLTKS 258
Query: 206 LQLKEQL 226
LQ + Q+
Sbjct: 259 LQAELQM 265
>04_04_0261 + 24007790-24009098,24009191-24011118
Length = 1078
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = -1
Query: 171 LMLANAIYSGVLPSAVSSIAIIKTCNLFLNK*THNLQQKSK*ITSV 34
L L++ ++G +PS +S +A +++ +L LN+ + + + +TSV
Sbjct: 941 LNLSHNAFTGTIPSQLSGLAQLESLDLSLNQLSGEIPEVLVSLTSV 986
>02_05_0029 - 25194827-25195095,25195129-25197970
Length = 1036
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -1
Query: 168 MLANAIYSGVLPSAVSSIAIIKTCNLFLNK*THNL 64
++AN+ SG +PS V++ A +K +L NK + N+
Sbjct: 448 VIANSHLSGSVPSWVANFAQLKVLDLSWNKLSGNI 482
>11_06_0115 +
20288220-20288303,20289223-20289706,20290160-20290393,
20291811-20292770,20292931-20293404,20293406-20294664
Length = 1164
Score = 25.8 bits (54), Expect = 4.9
Identities = 9/36 (25%), Positives = 25/36 (69%)
Frame = -1
Query: 171 LMLANAIYSGVLPSAVSSIAIIKTCNLFLNK*THNL 64
L+L++ ++SG++P +++++ ++ NL N + N+
Sbjct: 880 LLLSHNVFSGIIPINITNLSNLRQLNLAGNSLSGNI 915
>07_01_1045 +
9131301-9131483,9131652-9131717,9132433-9132513,
9133414-9133482,9133581-9133643,9133933-9133941,
9134259-9134341,9134415-9134517
Length = 218
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/65 (21%), Positives = 31/65 (47%)
Frame = +2
Query: 44 IYLLFCCRLCVYLFRNRLQVFIIAMELTAEGKTPEYMALASIKFKLSLPHLKDNLQLKEQ 223
+ ++F C C ++ + + + +G P+Y+A + +K S P+L D Q +
Sbjct: 82 LLVMFVCNHCPFVKHLKKDIAKLTSFYMEDG--PDYIAEEAKLYKYSFPYLYDESQEVAK 139
Query: 224 LLQAI 238
+A+
Sbjct: 140 AFRAV 144
>11_01_0467 +
3621266-3621401,3621531-3622699,3622815-3623128,
3623276-3623937,3624040-3624401
Length = 880
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -1
Query: 177 LNLM-LANAIYSGVLPSAVSSIAIIKTCNLFLNK 79
LNL+ +A ++GV+PS++ +A + +L LN+
Sbjct: 247 LNLIDMAENNFTGVIPSSIGKLAKLNVLSLQLNQ 280
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = -1
Query: 237 IACNNCSFNCRLSFK*GKLSLNLMLANAIYSGVLPSAVSSIAIIKTCNLFLN 82
+A N+ + N +S ++++LAN +G +PS +++ + ++ NL N
Sbjct: 196 LAGNSLTGNIPISLGSSTSLVSVVLANNTLTGPIPSVLANCSSLQVLNLVSN 247
>05_06_0174 - 26149663-26149885,26150353-26151701
Length = 523
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -1
Query: 171 LMLANAIYSGVLPSAVSSIAIIKTCNLFLNK*T 73
L LAN+ YSG +P + +A + T +L N T
Sbjct: 314 LRLANSGYSGSIPETLGRLASLTTLSLENNNLT 346
>04_04_1666 + 35202970-35203163,35203615-35203677,35204834-35205815
Length = 412
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 186 KLSLNLMLANAIYSGVLPSAVSSIAI 109
+L L++ L + +YSGVL S V + +
Sbjct: 252 RLGLDIRLLSVVYSGVLASGVMLVVL 277
>01_01_0433 + 3282195-3285185
Length = 996
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -1
Query: 177 LNLMLANAIYSGVLPSAVSSIAIIKTCNLFLNK*THNLQQKSK*ITSVNL 28
+ L ++ +SG +PS++S++ +K +L N L + S+NL
Sbjct: 324 IKLHVSGTKFSGYIPSSISNLTDLKELSLSANNFPTELPSSLGMLKSLNL 373
>11_06_0128 - 20389375-20389781,20389988-20392787
Length = 1068
Score = 25.0 bits (52), Expect = 8.5
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -1
Query: 186 KLSLNLMLANAIYSGVLPSAVSSIAIIKTCNLFLNK*THNLQQKSK*ITSVNLV 25
KLS + ANA +SG +PS V+++ + NL N T + ++ I S++ +
Sbjct: 483 KLSSLELQANA-FSGEIPSTVANLTKLSALNLARNNFTGAIPRRLFNILSLSKI 535
>06_01_0211 +
1604799-1605037,1605420-1605575,1605972-1606043,
1606325-1606396,1606608-1606679,1606777-1606848,
1606936-1607007,1607092-1607160,1607278-1607349,
1607630-1607701,1607786-1607857,1607940-1608011,
1608100-1608171,1608286-1608357,1608449-1608520,
1608633-1608704,1608801-1608872,1608962-1609033,
1609120-1609191,1609283-1609353,1609439-1609570,
1609676-1610014,1610097-1610467,1610599-1610928,
1611115-1611150
Length = 964
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1
Query: 171 LMLANAIYSGVLPSAVSSIAIIKTCNLFLNK*THNL 64
L+L N +G +PS +S I +KT +L N+ T ++
Sbjct: 156 LILKNNQLTGPIPSTLSQIPNLKTLDLAQNQLTGDI 191
>02_05_0226 + 26971851-26972034,26972734-26972834,26972876-26972978,
26973335-26973477,26973525-26973605,26973929-26974015,
26974097-26974239,26974746-26974896,26974973-26975095,
26975362-26975445,26975531-26975718,26976726-26976900,
26977008-26977129,26977231-26977310,26977532-26977590,
26977921-26978075,26978680-26978858,26980050-26980162,
26980243-26980413,26980552-26980680,26980756-26980856,
26980942-26981059,26981739-26981818,26983230-26983302,
26983865-26983950,26984025-26984076,26984221-26984352,
26984560-26984628,26984912-26985004,26985806-26985901,
26986710-26986808,26986894-26986986,26987459-26987608,
26988391-26988549
Length = 1323
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 143 PEYMALASIKFKLSLPHLKDNLQLKEQLLQAI 238
P Y+ L+ ++ L L DN+QL E+L Q +
Sbjct: 940 PNYVKLSKGEYTLQLYIRHDNVQLLEKLKQLV 971
>02_01_0426 + 3113443-3114220,3119557-3119693,3119831-3120817
Length = 633
Score = 25.0 bits (52), Expect = 8.5
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 171 LMLANAIYSGVLPSAVSSIAIIKTCNLFLNK*THNLQQKSK*ITSVNLV 25
L LAN +G +PS V + + NL N + + Q+ +T++ +V
Sbjct: 477 LNLANNELTGAIPSEVGQLKSLTLLNLSFNSLSGQIPQQLFDLTNLQVV 525
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,667,020
Number of Sequences: 37544
Number of extensions: 61693
Number of successful extensions: 258
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 14,793,348
effective HSP length: 58
effective length of database: 12,615,796
effective search space used: 264931716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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