BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0001_A19 (592 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces po... 29 0.67 SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 28 1.2 SPAC23H3.11c |||glucosidase |Schizosaccharomyces pombe|chr 1|||M... 27 1.5 SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1||... 26 4.7 SPBC17A3.09c |||lipoate-protein ligase A |Schizosaccharomyces po... 26 4.7 SPCC622.07 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 26 4.7 SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 25 6.2 SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 8.3 SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 8.3 SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 25 8.3 >SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces pombe|chr 2|||Manual Length = 1014 Score = 28.7 bits (61), Expect = 0.67 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = +2 Query: 104 ILQLSSAMILMDSFYQLLMKFIHNSSLIWTLYLRFI 211 ++ L+ A L + YQ S +WTLYL F+ Sbjct: 143 VITLTDAHSLFERAYQTCKFHFSKSQCVWTLYLEFL 178 >SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces pombe|chr 1|||Manual Length = 4924 Score = 27.9 bits (59), Expect = 1.2 Identities = 15/37 (40%), Positives = 25/37 (67%) Frame = +2 Query: 440 LSIAVAKYITISTNN*QHVITSSVLQTAWVPYLNSLG 550 LSI+ AK TI + + + S++L T+W+ +LNS+G Sbjct: 3546 LSISSAKLSTICRSVLKASVNSALL-TSWICFLNSIG 3581 >SPAC23H3.11c |||glucosidase |Schizosaccharomyces pombe|chr 1|||Manual Length = 629 Score = 27.5 bits (58), Expect = 1.5 Identities = 15/50 (30%), Positives = 29/50 (58%) Frame = +1 Query: 169 PQFFVNMDTLLKIYRTKMQDGILHDAKAINYGIVKEEEQYVYYANYSNTF 318 P F ++D L +YR+K +D HD K+ ++ EE+ Y+ ++ + + F Sbjct: 116 PSQFSSID-LSWVYRSKEEDDDFHDPKSSVVSLMGEED-YLGWSRFCDLF 163 >SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 923 Score = 25.8 bits (54), Expect = 4.7 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = +1 Query: 181 VNMDTLLKIYRTKMQDGILHDAKAINYGIVKEEEQYVYYANYSNTFLYNNEEQRLTY 351 +NMD LL Y TK D + +NY ++ Y + N ++F+ +++RL + Sbjct: 289 MNMDILLDSYLTKAMDIHATFIQKLNYDLI--NLLYEPFHNIYSSFIKPIDDRRLEF 343 >SPBC17A3.09c |||lipoate-protein ligase A |Schizosaccharomyces pombe|chr 2|||Manual Length = 363 Score = 25.8 bits (54), Expect = 4.7 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +1 Query: 190 DTLLKIYRTKMQDG-ILHDAKAINYGIVKEEEQYVYYANYS 309 D + I R K G + HD +NY ++ E++ + N S Sbjct: 83 DNFVNIIRRKSGGGTVFHDFGNLNYSVLMNREEFSHTENAS 123 >SPCC622.07 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual Length = 128 Score = 25.8 bits (54), Expect = 4.7 Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 2/34 (5%) Frame = -2 Query: 327 IVKESVGIVG-VIHI-LLFLFYNSIINSLCIVKN 232 + KE I+ +++I ++FLF N +++ +C VKN Sbjct: 22 VAKEKYKIIHRLLYISIIFLFLNYVVDIVCYVKN 55 >SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|||Manual Length = 843 Score = 25.4 bits (53), Expect = 6.2 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%) Frame = -2 Query: 279 FLFYNSIIN-SLCIVKNTVLHFSAINLK*SVHINEE 175 FLF N N SLC ++T F + S+HI E Sbjct: 699 FLFSNGSCNTSLCYYESTDPDFGGLKTPMSIHIERE 734 >SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||Manual Length = 557 Score = 25.0 bits (52), Expect = 8.3 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = +1 Query: 469 NFYQQLTTRYYFERLTNGLGSIPEF 543 NFY + YF T G+ S+P F Sbjct: 126 NFYPPIQNSTYFINATGGIDSMPYF 150 >SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog 3|Schizosaccharomyces pombe|chr 1|||Manual Length = 925 Score = 25.0 bits (52), Expect = 8.3 Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Frame = +1 Query: 400 HLPFWWSSERYGNLKHRRGEI-YYNFYQQLTTRYYFERLTNGLGSIPEFSWYSP 558 H FWWS + NL E+ NF L FE N + EFS SP Sbjct: 118 HQKFWWSLRKKRNLPKENSELDLSNFQDDLD----FE---NSISQKNEFSQKSP 164 >SPCC1235.09 |||histone deacetylase complex subunit|Schizosaccharomyces pombe|chr 3|||Manual Length = 564 Score = 25.0 bits (52), Expect = 8.3 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%) Frame = +1 Query: 76 NEGQFL-YAYYIAVIQRNDTHG 138 N G FL YA++ VI+ D+HG Sbjct: 274 NSGSFLAYAFFSGVIEIYDSHG 295 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,451,112 Number of Sequences: 5004 Number of extensions: 51419 Number of successful extensions: 151 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 147 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 151 length of database: 2,362,478 effective HSP length: 69 effective length of database: 2,017,202 effective search space used: 256184654 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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