Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_A16
(343 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56213| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.56
SB_45298| Best HMM Match : DUF827 (HMM E-Value=0.058) 29 1.3
SB_39051| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-21) 29 1.3
SB_33454| Best HMM Match : PAN (HMM E-Value=0.0013) 29 1.3
SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35) 28 2.3
SB_50311| Best HMM Match : Ldl_recept_a (HMM E-Value=3.4e-20) 27 3.0
SB_44729| Best HMM Match : SET (HMM E-Value=0) 27 3.0
SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.0
SB_20928| Best HMM Match : NHL (HMM E-Value=0) 27 3.0
SB_11852| Best HMM Match : fn3 (HMM E-Value=1.2e-24) 27 4.0
SB_40851| Best HMM Match : TSP_1 (HMM E-Value=3.4e-09) 27 4.0
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 27 4.0
SB_21128| Best HMM Match : Arg_repressor (HMM E-Value=1.9) 27 4.0
SB_35466| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_35343| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_51020| Best HMM Match : BDV_P10 (HMM E-Value=1.9) 27 5.3
SB_37914| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_36509| Best HMM Match : GDPD (HMM E-Value=5.9e-17) 27 5.3
SB_8862| Best HMM Match : rve (HMM E-Value=3.3e-12) 27 5.3
SB_45442| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_40823| Best HMM Match : rve (HMM E-Value=1.4e-12) 26 7.0
SB_38927| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_45583| Best HMM Match : RVT_1 (HMM E-Value=1.4e-05) 26 7.0
SB_42130| Best HMM Match : rve (HMM E-Value=5.9e-13) 26 7.0
SB_41614| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.0
SB_30314| Best HMM Match : CBS (HMM E-Value=2.1) 26 7.0
SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11) 26 7.0
SB_4914| Best HMM Match : RVT_1 (HMM E-Value=2.5e-16) 26 7.0
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 26 9.2
SB_15342| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_57858| Best HMM Match : RNA_pol_A_CTD (HMM E-Value=5.7) 26 9.2
SB_24534| Best HMM Match : RVT_1 (HMM E-Value=0) 26 9.2
>SB_56213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 29.9 bits (64), Expect = 0.56
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = -2
Query: 240 TSGSLNVTNNISLISCDFSLSTISMMA--STFSFTCSILNSTDLVSSITNVKLLDLI 76
T +++ NIS IS +++STIS ++ ST S T S +++ VS+I+ + + I
Sbjct: 93 TISTISTVYNISTISTVYTISTISTVSTISTIS-TVSTISTISTVSTISTISTVSTI 148
>SB_45298| Best HMM Match : DUF827 (HMM E-Value=0.058)
Length = 333
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/62 (25%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 116 RSVLFNIEQVKENVDAIMDIVLKEKSHEIKDMLLVTFNDPD-VKLRVKTSSRQEFKSVLS 292
++ L E+ ++ + + M+ LKE+ E+K++L T + D +K + T ++EF L
Sbjct: 71 KNTLSMTEKERDELKSKMNTGLKEELMEVKNLLSKTKQERDELKRKAATGLKEEFTEELQ 130
Query: 293 SI 298
++
Sbjct: 131 AL 132
>SB_39051| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-21)
Length = 1405
Score = 28.7 bits (61), Expect = 1.3
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = +2
Query: 194 HEIKDMLLVTFNDPDVKLRVKTSSRQEFKSVLSSIVS 304
H I+D+LL NDPD++ V ++ FK++++ +++
Sbjct: 174 HIIRDVLLNGINDPDIRREV-LGTKNIFKTLVNDVLA 209
>SB_33454| Best HMM Match : PAN (HMM E-Value=0.0013)
Length = 459
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -2
Query: 252 TLSFTSGSLNVTNNISLI---SCDFSLSTISMMASTFSFTCSILNSTDLVSSITN 97
T T+G+ ++TNN + + + + + ST M +T T S + TD + +TN
Sbjct: 247 TTEITNGTTDMTNNTTEMTNNTTEITTSTTDMTDNTTEMTNSTTDMTDNTTDVTN 301
>SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35)
Length = 1208
Score = 27.9 bits (59), Expect = 2.3
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +2
Query: 116 RSVLFNIEQVKENVDAIMDIVLKEKSHEIKDMLLVTFNDPDVKLRVKTSSRQEFKSVLSS 295
R L +E + + + +D+ + + K L+ T P + +++ S R KS S
Sbjct: 18 RRRLARLESLSSDSEGELDLDINSRISVTKRNLVKT---PKTESQIRRSKRSNLKSSSES 74
Query: 296 IVSGNYFNNDCPE 334
NY NN P+
Sbjct: 75 DNEDNYSNNSSPK 87
>SB_50311| Best HMM Match : Ldl_recept_a (HMM E-Value=3.4e-20)
Length = 772
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = -2
Query: 168 MMASTFSFTCSILNSTDLVSSITNVKLLDLIKLRCTKINRHFNIGNI 28
++ + F I + DL+ + NV + ++I C N NIG I
Sbjct: 254 VIVAVFPAIAVIFVAVDLIGFVANVMMSEIILCTCKSNNYSSNIGKI 300
>SB_44729| Best HMM Match : SET (HMM E-Value=0)
Length = 1112
Score = 27.5 bits (58), Expect = 3.0
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 255 FTLSFTSGSLNVTNNISLISCDFSLSTISMMASTFSFTCSILNSTDLVS-SITNVKLLDL 79
F S G +N T+ + + D + M F T +LN+ DL++ +T ++ +L
Sbjct: 1039 FCRSHAQGQINSTDKNTFLCTDHVDEVLPGMTDKFLATDQVLNALDLINGDLTGIRPTEL 1098
Query: 78 IKLR 67
L+
Sbjct: 1099 DHLQ 1102
>SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1995
Score = 27.5 bits (58), Expect = 3.0
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -2
Query: 216 NNISLISCDFSL-STISMMASTFSFTCSILNSTDLVSSITNVKLLDLIKLRCTKINRHFN 40
NN ++ F L I+ TFS + LV I ++KL D +K I+ N
Sbjct: 653 NNFQVLKSKFQLCGIIAGKGKTFSSRSAEYAIPGLVEKIGDIKLKDAVKETLMIISEKLN 712
Query: 39 IGNI 28
+G +
Sbjct: 713 LGYV 716
>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
Length = 795
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 77 MRSSSLTFVIDDTRSVLFNIEQVKENVDAIMDIVLKEKSHEIKDMLLVTFND 232
++ SSL ID+ + +L N+ VKE + ++ + +K L T ND
Sbjct: 317 VKGSSLQHQIDELQKLLSNVLSVKEKSEHVLKQGTGPELLAVKGQLTETLND 368
>SB_11852| Best HMM Match : fn3 (HMM E-Value=1.2e-24)
Length = 691
Score = 27.1 bits (57), Expect = 4.0
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = -2
Query: 234 GSLNVTNNISLISCDFSLSTISMMASTF--SFTCSILNSTDLV---SSITNVKL 88
GS NVTN +L+SC S IS + F SF+ +L +++ SI+N+ L
Sbjct: 422 GSKNVTNGTTLLSCRKG-SVISTFSIKFKKSFSDELLTLQEMMEVNQSISNISL 474
>SB_40851| Best HMM Match : TSP_1 (HMM E-Value=3.4e-09)
Length = 925
Score = 27.1 bits (57), Expect = 4.0
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = -2
Query: 342 SAISGQSLLK*LPDTIELNTLLNS*RLLVFTLSFTSGSLNVTNNISLISCDFSLSTIS-M 166
S SG ++ LP++ LNTL + + TL+ NVT +S++ S S
Sbjct: 38 SPSSGSTISSVLPEST-LNTLPSLPSSITSTLTPYQ---NVTPTMSIVVKPSIPSPASDN 93
Query: 165 MASTFSFTCSILNSTDLVSSITNVKL 88
MAS T SI+N+T SS NV L
Sbjct: 94 MASLAQLTSSIINTTLFPSSRWNVNL 119
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 68 LNLMR-SSSLTFVIDDTRSVLFNIEQVKENVDAIMDIVLKEKSHE 199
+N +R + SL IDDT S +IE++ + + A + + + + HE
Sbjct: 1028 INQVRHAKSLGLYIDDTLSWAKHIEEISKKISAAIGALKRIRDHE 1072
>SB_21128| Best HMM Match : Arg_repressor (HMM E-Value=1.9)
Length = 381
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +2
Query: 182 KEKSHEIKDMLLVTFNDPDVKLRVKTSSRQEFKSVLSSI 298
K + ++ D + F DVK++ + KS+LSS+
Sbjct: 153 KRRQEKVADTVTNAFESSDVKIKADPDLDSKLKSILSSL 191
>SB_35466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 14 IFLLKMFPILKCLLILVHLN-LMRSSSLTFVIDDTRSVLFNIEQVKEN 154
+FL+ F +L CLL LV N L RS + VI+ + + + K N
Sbjct: 778 LFLIFPFAVLVCLLTLVAENALHRSQNRVRVINVQSTTMSDFRDTKAN 825
>SB_35343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3
Query: 179 VLYP*WRQHFPSPVR 135
V P WRQH+ SPVR
Sbjct: 156 VFTPPWRQHYDSPVR 170
>SB_51020| Best HMM Match : BDV_P10 (HMM E-Value=1.9)
Length = 576
Score = 26.6 bits (56), Expect = 5.3
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -3
Query: 179 VLYP*WRQHFPSPVR 135
V P WRQH+ SPVR
Sbjct: 174 VFTPPWRQHYDSPVR 188
>SB_37914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 26.6 bits (56), Expect = 5.3
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = -2
Query: 213 NISLISCDFSLSTISMMASTFSFTCSILNSTDLVSSITNVKLLDLIKLRCT 61
N +++ D+ +I ++ST + C + D+ S + KL D L CT
Sbjct: 130 NAAMLREDYKPPSIKKISSTLN-GCKVFTVVDMSSCYWHKKLTDAASLLCT 179
>SB_36509| Best HMM Match : GDPD (HMM E-Value=5.9e-17)
Length = 534
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 194 HEIKDMLLVTFNDPDVKLRVKTSSRQ 271
H KD + V F+D VKL V+TS+++
Sbjct: 269 HVTKDHVPVVFHDDTVKLSVETSNQK 294
>SB_8862| Best HMM Match : rve (HMM E-Value=3.3e-12)
Length = 1358
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = -2
Query: 213 NISLISCDFSLSTISMMASTFSFTCSILNSTDLVSSITNVKLLDLIKLRCTKINRHFNI 37
N +++ D+ +I ++ST + C++ D+ S + KL D L CT N F +
Sbjct: 591 NEAIVREDYKPPSIEKISSTLN-GCTVFTVVDMSSCYWHKKLSDAASLLCT-FNTPFGV 647
>SB_45442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -2
Query: 213 NISLISCDFSLSTISMMASTFSFTCSILNSTDLVSSITNVKLLDLIKLRCT 61
N +++ D+ +I ++ST + C++ D+ S + KL D L CT
Sbjct: 370 NEAIVREDYKPPSIEKISSTLN-GCTVFTVVDMSSCYWHKKLSDAASLLCT 419
>SB_40823| Best HMM Match : rve (HMM E-Value=1.4e-12)
Length = 651
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -2
Query: 213 NISLISCDFSLSTISMMASTFSFTCSILNSTDLVSSITNVKLLDLIKLRCT 61
N +++ D+ +I ++ST + C++ D+ S + KL D L CT
Sbjct: 246 NEAIVREDYKPPSIEKISSTLN-GCTVFTVVDMSSCYWHKKLSDAASLLCT 295
>SB_38927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -2
Query: 213 NISLISCDFSLSTISMMASTFSFTCSILNSTDLVSSITNVKLLDLIKLRCT 61
N +++ D+ +I ++ST + C++ D+ S + KL D L CT
Sbjct: 49 NEAIVREDYKPPSIEKISSTLN-GCTVFTVVDMSSCYWHKKLSDAASLLCT 98
>SB_45583| Best HMM Match : RVT_1 (HMM E-Value=1.4e-05)
Length = 182
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -2
Query: 213 NISLISCDFSLSTISMMASTFSFTCSILNSTDLVSSITNVKLLDLIKLRCT 61
N +++ D+ +I ++ST + C++ D+ S + KL D L CT
Sbjct: 49 NEAIVREDYKPPSIEKISSTLN-GCTVFTVVDMSSCYWHKKLSDAASLLCT 98
>SB_42130| Best HMM Match : rve (HMM E-Value=5.9e-13)
Length = 975
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -2
Query: 213 NISLISCDFSLSTISMMASTFSFTCSILNSTDLVSSITNVKLLDLIKLRCT 61
N +++ D+ +I ++ST + C++ D+ S + KL D L CT
Sbjct: 483 NEAIVREDYKPPSIEKISSTLN-GCTVFTVVDMSSCYWHKKLSDAASLLCT 532
>SB_41614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 938
Score = 26.2 bits (55), Expect = 7.0
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -2
Query: 222 VTNNISLISCDFSLSTISMMASTFSFTCSILNSTDLVSSITN 97
V N ++L++ ++ + +T +FTCS+ N L+S N
Sbjct: 806 VGNTVNLLNSSGPYLSLIPVGNTMNFTCSV-NGCQLISKAAN 846
>SB_30314| Best HMM Match : CBS (HMM E-Value=2.1)
Length = 869
Score = 26.2 bits (55), Expect = 7.0
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -2
Query: 297 IELNTLLNS*RLLVFTLSFTSGSLNVTNNISLISCDFSLSTISMMASTFSFTCSILNSTD 118
+ +N LL+ RLL L T L N + I+C S++ +++ T ++L + +
Sbjct: 636 LSINRLLSINRLLTINLLLTINRLLSINRLLSINCLLSIN--CLLSINLLLTINLLLTIN 693
Query: 117 LVSSITNVKLLD-LIKLRC 64
+ SI + ++ L+ + C
Sbjct: 694 RLLSINRLLSINCLLSINC 712
>SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11)
Length = 1702
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -2
Query: 213 NISLISCDFSLSTISMMASTFSFTCSILNSTDLVSSITNVKLLDLIKLRCT 61
N +++ D+ +I ++ST + C++ D+ S + KL D L CT
Sbjct: 1151 NEAIVREDYKPPSIEKISSTLN-GCTVFTVVDMSSCYWHKKLSDAASLLCT 1200
>SB_4914| Best HMM Match : RVT_1 (HMM E-Value=2.5e-16)
Length = 548
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = -2
Query: 213 NISLISCDFSLSTISMMASTFSFTCSILNSTDLVSSITNVKLLDLIKLRCT 61
N +++ D+ +I ++ST + C++ D+ S + KL D L CT
Sbjct: 81 NEAIVREDYKPPSIEKISSTLN-GCTVFTVVDMSSCYWHKKLSDAASLLCT 130
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 25.8 bits (54), Expect = 9.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 92 LTFVIDDTRSVLFNIEQVKENVD 160
L F+ DD SV+ EQ+ ENV+
Sbjct: 129 LVFMFDDVDSVVEQKEQISENVE 151
>SB_15342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 25.8 bits (54), Expect = 9.2
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -2
Query: 294 ELNTLLNS*RLLVFTLSFTSGSLNVTNNISLISCDFSLSTISMMASTFSFTCSILNS-TD 118
E N + N R FT+ G++ TN + SC+ + T ++ T + T + NS T+
Sbjct: 477 ENNAIFNQIRPSNFTVDEKYGTIEKTNGTTEKSCNRTEKTHNINEMT-NITIQMTNSTTE 535
Query: 117 LVSSITNVK 91
+ ++ T ++
Sbjct: 536 MTNNTTEIR 544
>SB_57858| Best HMM Match : RNA_pol_A_CTD (HMM E-Value=5.7)
Length = 280
Score = 25.8 bits (54), Expect = 9.2
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 65 HLNLMRSSSLTFVIDDTRSVLFNIEQVKEN-VDAIMDIVLKEKSHEIKDMLLVTFN 229
H + S++F D +L + K + D I +LKE + EI D++ FN
Sbjct: 120 HGEIPMMGSISFNRDGVEKLLKTLNSKKASGPDKIQTTLLKETASEIADVVTFLFN 175
>SB_24534| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 423
Score = 25.8 bits (54), Expect = 9.2
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 65 HLNLMRSSSLTFVIDDTRSVLFNIEQVKEN-VDAIMDIVLKEKSHEIKDMLLVTFN 229
H + S++F D +L + K + D I +LKE + EI D++ FN
Sbjct: 28 HGEIPMMGSISFNRDGVEKLLKTLNSKKASGPDKIQTTLLKETASEIADVVTFLFN 83
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,201,890
Number of Sequences: 59808
Number of extensions: 154762
Number of successful extensions: 447
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 498218920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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