Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_A14
(545 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0081 + 646100-646346,646432-646848,647067-647170,648152-64... 54 7e-08
04_04_1635 - 34943881-34945233,34945321-34945524 53 2e-07
08_01_0900 + 8867895-8868938,8869887-8870085,8871500-8871713,887... 48 6e-06
04_03_0305 - 14125193-14125421,14125666-14127104 47 1e-05
03_01_0369 - 2863159-2863491,2864149-2864214,2865045-2865140,286... 44 6e-05
02_04_0049 + 19238794-19239003,19239359-19239505,19239595-192397... 41 7e-04
08_02_0851 - 21866088-21866210,21866311-21866413,21866531-218667... 40 0.001
06_03_0983 - 26559772-26559915,26560149-26560251,26560335-265605... 39 0.002
02_01_0577 + 4280590-4281225,4281749-4282102,4282214-4282412,428... 39 0.002
11_01_0439 + 3353516-3353962,3354403-3354483,3354675-3354947,335... 37 0.009
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 34 0.064
04_03_0824 + 20086639-20087263,20087282-20087463,20087569-200877... 33 0.11
11_01_0285 - 2115051-2115146,2115220-2115306,2115417-2115503,211... 32 0.34
05_03_0481 + 14556223-14556762,14556848-14556928,14559532-145597... 31 0.60
03_01_0557 + 4143339-4143600,4143674-4144704 31 0.60
04_04_0397 - 24921892-24922947,24923486-24923734,24923807-249241... 29 1.8
03_05_0731 - 27213777-27215177,27218188-27218405,27218504-27218648 29 1.8
01_04_0082 + 15835137-15836312 29 2.4
12_01_0441 + 3484003-3484374,3485071-3485151,3485242-3485514,348... 28 4.2
06_01_0414 + 2948868-2948998,2949136-2949202,2949442-2949531,295... 28 4.2
04_01_0367 + 4834602-4835489,4836117-4836644 28 4.2
08_01_0432 + 3782594-3783027,3783678-3783759,3784067-3784117,378... 27 7.4
06_03_1346 + 29480482-29480676,29480754-29481067,29481164-294812... 27 7.4
05_04_0288 + 19839597-19839821,19841882-19842107,19842494-198425... 27 7.4
02_05_0430 - 28923784-28923830,28923931-28924341,28924552-289249... 27 7.4
>06_01_0081 +
646100-646346,646432-646848,647067-647170,648152-648352,
649088-649798,649944-650674,650942-651017,651096-651182,
651429-651517,651917-651973,652402-652510,652590-652649,
652835-652919,653178-653242,653694-653753,653869-653913,
654697-654800,654877-655099
Length = 1156
Score = 54.0 bits (124), Expect = 7e-08
Identities = 40/117 (34%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Frame = +3
Query: 21 TVPIGVPISNNYVYLLDENMRCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHP 200
+VPIG PISN V + + + GE+ V G L GY+ + + H
Sbjct: 347 SVPIGFPISNCEVCIATD----AEVADEGEMHVTGACLFAGYLEES-----MASNHTEDN 397
Query: 201 NFAKLYRTGDFGI-LDKGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVV 368
+ YRTGDF L G ++ GR D VKI G R LQEV+ ++ P V V
Sbjct: 398 GSSTYYRTGDFARRLKSGEFIFLGRKDRTVKIYGQRFSLQEVESTLNEHPDVSAAAV 454
>04_04_1635 - 34943881-34945233,34945321-34945524
Length = 518
Score = 52.8 bits (121), Expect = 2e-07
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 3/164 (1%)
Frame = +3
Query: 63 LLDENMRCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFA-KLYRTGDFGI 239
+LDE R V G+ GEVCV G N+ GY +G NP F + TGD G+
Sbjct: 346 ILDEEGRRVEAGKSGEVCVRGANVTSGY-KG--------NPEANEAAFRFGWFHTGDIGV 396
Query: 240 LD-KGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFV 416
+D +G + GR + G ++ EVD + P + V EI V
Sbjct: 397 VDEEGYLRLVGRIKELINRGGEKISPIEVDSVLLGHPAIAQAVAFGVPDAKYGEEINCAV 456
Query: 417 TINPEARMSAKNIEAELTSSLTDYMIPQVIEI-ETVPVLVNGKV 545
+ + + A +L + +P+ + I + +P GK+
Sbjct: 457 IPREGVSLGEEEVLAYCRRNLAAFKVPKKVYIADELPKTATGKI 500
>08_01_0900 +
8867895-8868938,8869887-8870085,8871500-8871713,
8871854-8871959,8872077-8872199
Length = 561
Score = 47.6 bits (108), Expect = 6e-06
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Frame = +3
Query: 33 GVPISNNYVYLLDENM-RCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFA 209
G + N + ++D + + + PGE+C+ G + +GY+ + + NT
Sbjct: 378 GTVVRNAELKIIDPDTGKSLGRNLPGEICIRGQQIMKGYLNNPEATK------NTIDAEG 431
Query: 210 KLYRTGDFGIL-DKGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVE 386
L+ TGD G + D I R +K RG +V E++ + T P + + V+ +E
Sbjct: 432 WLH-TGDIGYVDDDDEIFIVDRLKEIIKYRGFQVAPAELEALLITHPSIADAAVVGKQIE 490
Query: 387 SSNPEI-LAFVTINPEARMSAKNIEAELTSSLTDY-MIPQVIEIETVPVLVNGKV 545
EI +AFV + +S +++ + + Y I +V ++ +P +GK+
Sbjct: 491 PEIGEIPVAFVAKTEGSELSEDDVKQFVAKEVIYYKKIREVFFVDKIPKAPSGKI 545
>04_03_0305 - 14125193-14125421,14125666-14127104
Length = 555
Score = 46.8 bits (106), Expect = 1e-05
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 4/183 (2%)
Frame = +3
Query: 9 HIFLTVPIGVPISNNYVYLLDENM-RCVREGEPGEVCVAGFNLARGYVRGK-DPHRFIHN 182
H+ +G + N V +D + R + PGE+CV ++ +GY + K + R +
Sbjct: 364 HVAKKSSVGFILPNLEVKFVDPDTGRSLPANTPGELCVRSQSVMQGYYKRKEETERTVDG 423
Query: 183 PHNTHPNFAKLYRTGDFGILD-KGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDN 359
H TGD G +D G + R +K +G +V E++ + + P V++
Sbjct: 424 KGWLH--------TGDVGYIDGDGDVFIVDRIKELIKYKGFQVAPAELEAVLLSHPSVED 475
Query: 360 CVVLCYGVESSNPEILAFVTINPEARMSAKNIEAELTSSLTDYMIPQVIEI-ETVPVLVN 536
V E + +A V A + I A + + Y +V+ I + +P V+
Sbjct: 476 AAVFGVPDEEAGEVPVACVVRRHGAEEGEEEIVAYVAERVASYKRVRVLHIVDAIPKSVS 535
Query: 537 GKV 545
GK+
Sbjct: 536 GKI 538
>03_01_0369 -
2863159-2863491,2864149-2864214,2865045-2865140,
2865530-2865632,2865771-2865838,2866570-2866712,
2867050-2867242,2867602-2867640,2867742-2867807,
2868617-2869651
Length = 713
Score = 44.4 bits (100), Expect = 6e-05
Identities = 36/174 (20%), Positives = 79/174 (45%), Gaps = 3/174 (1%)
Frame = +3
Query: 33 GVPISNNYVYLLD-ENMRCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFA 209
G +S ++D + ++ + + GE+CV G N+ +GY F H
Sbjct: 408 GTLVSGVEAKIVDIKTLKHLPPNQVGEICVRGPNVMQGYFNNVQATEFTIKQGWLH---- 463
Query: 210 KLYRTGDFGILDKGVILY-AGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVE 386
TGD G D G L+ R +K +G ++ E++ + + P + + VV+ +
Sbjct: 464 ----TGDLGYFDGGGQLFVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAVVIPFPDA 519
Query: 387 SSNPEILAFVTINPEARMSAKNIEAELTSSLTDY-MIPQVIEIETVPVLVNGKV 545
+ +A+V +P++ ++ +++ + + Y + +V + +VP +GK+
Sbjct: 520 KAGEVPIAYVVRSPDSSLTEVDVQKFIEKQVAYYKRLKRVTFVGSVPKSASGKI 573
>02_04_0049 +
19238794-19239003,19239359-19239505,19239595-19239750,
19239870-19239992,19240073-19240241,19240700-19240782,
19240917-19241018,19241104-19241192,19241317-19241407,
19241734-19241847,19242371-19242447,19242534-19242612,
19242710-19242778,19243022-19243197,19243309-19243365,
19243460-19243550,19243644-19243742,19243878-19244063
Length = 705
Score = 40.7 bits (91), Expect = 7e-04
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 204 FAKLYRTGDFGILDK-GVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYG 380
FA Y TGD DK G GR D + + GHR+ EV+ A+ + P V+
Sbjct: 550 FAGYYFTGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPKCAEAAVVAVE 609
Query: 381 VESSNPEILAFVTI 422
E I AFVT+
Sbjct: 610 HEVKGQGIYAFVTL 623
>08_02_0851 -
21866088-21866210,21866311-21866413,21866531-21866744,
21866877-21867075,21867171-21868151
Length = 539
Score = 40.3 bits (90), Expect = 0.001
Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 4/153 (2%)
Frame = +3
Query: 99 EPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAK--LYRTGDFGIL-DKGVILYAG 269
+PGE+C+ G + +GY ++NP T K TGD G + D I
Sbjct: 380 QPGEICIRGKQIMKGY---------LNNPEATEKTIDKDGWLHTGDIGFVDDDDEIFIVD 430
Query: 270 RADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVTINPEARMSAK 449
R +K +G +V E++ + V + V+ +S +AFV + ++
Sbjct: 431 RLKELIKYKGFQVAPAELEAMLIAHAAVADAAVVPMKDDSCGEIPVAFVVARDGSGITDD 490
Query: 450 NIEAELTSSLTDY-MIPQVIEIETVPVLVNGKV 545
I+ + + Y + ++ ++ +P +GK+
Sbjct: 491 EIKQYVAKQVVFYKRLHKIFFVDAIPKAPSGKI 523
>06_03_0983 -
26559772-26559915,26560149-26560251,26560335-26560548,
26563352-26563550,26564509-26564862,26565430-26566086
Length = 556
Score = 39.1 bits (87), Expect = 0.002
Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 3/174 (1%)
Frame = +3
Query: 33 GVPISNNYVYLLDENMRC-VREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFA 209
G + N + ++D + + + GE+C+ G + +GY+ DP + NT
Sbjct: 367 GTVVRNAELKIVDPDTGATLGRNQSGEICIRGEQIMKGYL--NDP----ESTKNTIDKGG 420
Query: 210 KLYRTGDFGIL-DKGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVE 386
L+ TGD G + D I R +K +G +V E++ + T P + + V+ E
Sbjct: 421 WLH-TGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPDIKDAAVVPMIDE 479
Query: 387 SSNPEILAFVTINPEARMSAKNIEAELTSSLTDY-MIPQVIEIETVPVLVNGKV 545
+ +AF+ + +S I+ + + Y + +V +++P +GK+
Sbjct: 480 IAGEVPVAFIVRIEGSAISENEIKQFVAKEVVFYKRLNKVFFADSIPKSPSGKI 533
>02_01_0577 +
4280590-4281225,4281749-4282102,4282214-4282412,
4284991-4285204,4285299-4285401,4285481-4285639
Length = 554
Score = 39.1 bits (87), Expect = 0.002
Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 3/174 (1%)
Frame = +3
Query: 33 GVPISNNYVYLLDENM-RCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFA 209
G + N + ++D + + + GE+C+ G + +GY+ DP NT
Sbjct: 360 GTVVRNAELKIVDPDTGTSLGRNQSGEICIRGEQIMKGYL--NDPEA----TKNTIDEDG 413
Query: 210 KLYRTGDFGIL-DKGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVE 386
L+ TGD G + D I R +K +G +V E++ + T P + + V+ +
Sbjct: 414 WLH-TGDIGFVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDD 472
Query: 387 SSNPEILAFVTINPEARMSAKNIEAELTSSLTDY-MIPQVIEIETVPVLVNGKV 545
+ +AF+ + ++ I+ + + Y I +V +++P +GK+
Sbjct: 473 LAGEVPVAFIVRTEGSEITEDEIKKFVAKEVVFYKRINKVFFTDSIPKNPSGKI 526
>11_01_0439 +
3353516-3353962,3354403-3354483,3354675-3354947,
3355081-3355212,3355303-3355476,3355568-3355702,
3355746-3355797,3355954-3356093,3356574-3356705,
3356787-3356921,3356995-3357201,3357779-3357943
Length = 690
Score = 37.1 bits (82), Expect = 0.009
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 6/119 (5%)
Frame = +3
Query: 30 IGVPISNNYVYLLD--ENMRCVREGEP--GEVCVAGFNLARGYVRGKDPHRFIHNPHNTH 197
+G P+ +Y+ L+D E + GE+ + G N+ +GY + + ++
Sbjct: 468 VGAPLPCSYIKLIDWAEGGYLTNDSPMPRGEIVIGGPNVTKGYFKNEAKTNEVYKDDE-- 525
Query: 198 PNFAKLYRTGDFGIL-DKGVILYAGRADSQVKIR-GHRVDLQEVDHAVSTIPCVDNCVV 368
+ + +GD G L G + R VK++ G V L +V+ A+S P VDN ++
Sbjct: 526 -RGMRWFYSGDIGRLHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVCPYVDNIMI 583
>04_04_0214 - 23674270-23676858,23677574-23680843,23680941-23681119,
23681200-23681559,23681645-23682086,23682199-23682332,
23682479-23682680
Length = 2391
Score = 34.3 bits (75), Expect = 0.064
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +3
Query: 93 EGEPGEVCVAGFNLARGYVRGKD-PHRFIHNPHNTHPNFAKLYRTGDFGILDKGVILYAG 269
+G GE+ ++ + GY + R N HPN K RTGD G G + G
Sbjct: 869 DGVEGEIWISSPSSGVGYWGNSEMSQRTFFNQLKNHPN-KKFTRTGDLGRTIDGNLFITG 927
Query: 270 RADSQVKIRGHRVDLQEVDHAVST 341
R + + G + +V+ V +
Sbjct: 928 RIKDLIIVAGRNIYSADVEKTVES 951
>04_03_0824 +
20086639-20087263,20087282-20087463,20087569-20087724,
20087867-20087989,20088079-20088247,20088384-20088466,
20088641-20088742,20089246-20089359,20089735-20089811,
20089884-20089962,20090060-20090128,20090235-20090410,
20090460-20090561,20090678-20090768,20090878-20090976,
20091141-20091326
Length = 810
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 249 GVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVTI 422
G GR D + + GHR+ EV+ A+ + P V+ E I AFVT+
Sbjct: 671 GYHFLTGRVDDVINVSGHRIGTAEVESALVSHPKCAEAAVVGIDHEVKGQGIYAFVTL 728
>11_01_0285 -
2115051-2115146,2115220-2115306,2115417-2115503,
2115724-2115809,2115889-2115992,2117447-2117533,
2117621-2117744,2118420-2118538,2118626-2118755,
2118902-2118990,2119122-2119210,2119985-2120078,
2120187-2120266,2120363-2120452,2121195-2121281,
2121381-2121425,2121847-2121923,2121997-2122102,
2122258-2122339,2122430-2122501,2122502-2122585,
2123007-2123084,2123155-2123224,2123737-2123851
Length = 725
Score = 31.9 bits (69), Expect = 0.34
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 6/140 (4%)
Frame = +3
Query: 30 IGVPISNNYVYLLD-ENMRCVREGEP---GEVCVAGFNLARGYVRGKDPHRFIHNPHNTH 197
+G P + + L+D M E +P GE+CV G + GY + + R + +
Sbjct: 495 VGPPNPSCEIKLVDVPEMNYTSEDQPYPRGEICVRGTTIFFGYYKDEIQTREVIDEDG-- 552
Query: 198 PNFAKLYRTGDFGI-LDKGVILYAGRADSQVKI-RGHRVDLQEVDHAVSTIPCVDNCVVL 371
TGD G+ L G + R + K+ +G + +++++ + + C +
Sbjct: 553 -----WLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFIAQCFI- 606
Query: 372 CYGVESSNPEILAFVTINPE 431
YG +S N ++A V + PE
Sbjct: 607 -YG-DSLNSSLVAVVAVEPE 624
>05_03_0481 +
14556223-14556762,14556848-14556928,14559532-14559798,
14559933-14559992,14560811-14560942,14561026-14561199,
14562769-14562919,14563651-14563790,14565656-14565787,
14565866-14566000,14566098-14566304,14567376-14567540
Length = 727
Score = 31.1 bits (67), Expect = 0.60
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +3
Query: 105 GEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAKLYRTGDFG-ILDKGVILYAGRADS 281
GEV V G+++ +GY + + + + + TGD G G + R
Sbjct: 534 GEVVVGGYSITKGYFNNEAK---TNEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKD 590
Query: 282 QVKIR-GHRVDLQEVDHAVSTIPCVDNCVV 368
VK++ G V L +V+ A++T VD+ +V
Sbjct: 591 IVKLQHGEYVSLGKVESALTTSNYVDSIMV 620
>03_01_0557 + 4143339-4143600,4143674-4144704
Length = 430
Score = 31.1 bits (67), Expect = 0.60
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -1
Query: 521 YRFDFNNLRYHVICEGTCQFSLYVFSGHSRFWVDCDKRQNLGITAFHAVA 372
Y F N+ + V + CQF LY+FS +R W Q+L + H VA
Sbjct: 134 YNVAFLNIEW-VPSDVACQFELYIFSSKNRKWDVKPVLQDLSRSENHKVA 182
>04_04_0397 -
24921892-24922947,24923486-24923734,24923807-24924157,
24924244-24924331,24924466-24924563,24925141-24925362,
24925490-24925585,24926410-24926481,24927156-24927305
Length = 793
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = -1
Query: 308 NTVTPYLDLRVSTTRIQDHAFIQDAEITSAIQFG-KIRVSVMRVMD 174
NT+ LD + RI D FIQ E+T+ +Q ++R V V+D
Sbjct: 385 NTIGKQLDENPKSRRINDTYFIQMKELTTNLQLAPRLRFMVRDVVD 430
>03_05_0731 - 27213777-27215177,27218188-27218405,27218504-27218648
Length = 587
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +3
Query: 78 MRCVREGEPGEVCVAGFNLA---RGYVRGKDPHRFIHNPHNTHPNFAKLYRTGDFGILDK 248
+R EG P V F A R + KDP + + +P +T KL T F LDK
Sbjct: 251 VRVTPEGSPFTSIVQVFAAAARKRSLKQPKDPKQDLFDPPHTSAIVTKLAHTDQFRCLDK 310
Query: 249 GVIL 260
I+
Sbjct: 311 AAIV 314
>01_04_0082 + 15835137-15836312
Length = 391
Score = 29.1 bits (62), Expect = 2.4
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Frame = +3
Query: 258 LYAGRADSQVKIRGHRVDLQEVDHAVSTIP------CVDNC--VVLC-YGVESSNPEILA 410
LY S +++ D + D ++S +P D+C +VLC YG +S+P +
Sbjct: 62 LYQKSDSSAIEVASLCPDDRSFDTSLSFLPRYEWLELTDSCNGLVLCKYGRNTSSPSVAN 121
Query: 411 FVTINPEAR 437
FV NP R
Sbjct: 122 FVVCNPATR 130
>12_01_0441 +
3484003-3484374,3485071-3485151,3485242-3485514,
3485695-3485826,3485903-3486076,3486164-3486393,
3486562-3486679,3486717-3486743,3486948-3487079,
3487189-3487323,3487393-3487599,3487772-3487936
Length = 681
Score = 28.3 bits (60), Expect = 4.2
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +3
Query: 105 GEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAKLYRTGDFG-ILDKGVILYAGRADS 281
GE+ + G N+ +GY + + ++ + + +GD G G + R
Sbjct: 488 GEIVIGGPNVTKGYFKNEAKTNEVYKDDE---KGMRWFYSGDIGRFHPDGCLEIIDRKKD 544
Query: 282 QVKIR-GHRVDLQEVDHAVSTIPCVDNCVV 368
VK++ G V L +V+ A+ P V+N ++
Sbjct: 545 IVKLQHGEYVSLGKVEAALIVSPYVENIMI 574
>06_01_0414 +
2948868-2948998,2949136-2949202,2949442-2949531,
2950509-2950565,2950684-2950732,2950934-2951010,
2952776-2952815,2952909-2953003,2953174-2953341,
2953634-2953721,2954275-2954341,2954571-2954646,
2954759-2954876,2954988-2955233,2955296-2955471,
2956056-2956238,2956331-2956450,2956586-2956621
Length = 627
Score = 28.3 bits (60), Expect = 4.2
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Frame = +3
Query: 105 GEVCVAGFNLARGYVRGKDPHR------FIHNPHNTHPNFAKLYRTGDFGILD-KGVILY 263
GEVCV G L GY + +D + + H + PN +Y TGD G G +
Sbjct: 425 GEVCVKGSVLFSGYYKREDLTQEVMIDGWFHTDDDYMPN--TMYNTGDVGEWQPNGSLKI 482
Query: 264 AGRADSQVKI-RGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVTINPEARM 440
R + K+ +G V ++ +++ + +D+ + YG ++ E INP ++
Sbjct: 483 IDRKKNIFKLSQGEYVAVENLENVYGVLQEIDS--IWIYG---NSFESFLVAVINPNQQV 537
>04_01_0367 + 4834602-4835489,4836117-4836644
Length = 471
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 173 EAMRIFTAH-ISSSKIETSHTHLTGFTFPNASHILIQKVNV 54
EA RI H + S + ++ + GF P SHI++ ++ +
Sbjct: 358 EAFRIHPYHPFNPSHVAIANITIAGFMIPKGSHIILSRIGL 398
>08_01_0432 +
3782594-3783027,3783678-3783759,3784067-3784117,
3784279-3784514,3785008-3785058,3790905-3791106,
3791695-3791977,3792617-3792687
Length = 469
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = -1
Query: 242 QDAEITSAIQFGKIRVSVMRVMDEAMRIFTAHISSSKIETSHTHLTGFTFPNASHILIQK 63
Q+ EIT +R+S ++ +R FTA+ ++ + H TG + P++S IL Q+
Sbjct: 271 QEEEITEIAGVSCLRLSTAANLEAGLRDFTAY-ANPHHRSRHAVTTG-SVPHSSGILRQQ 328
Query: 62 V 60
+
Sbjct: 329 I 329
>06_03_1346 +
29480482-29480676,29480754-29481067,29481164-29481236,
29481517-29481627,29481725-29481899,29481992-29482119,
29482310-29482370,29482893-29482963
Length = 375
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 325 IMLSLLSRVWIIVSFCATAWKAVIPRFWRLSQSTQKRECPLK 450
I +L+ R +V+ T W+ + W LS +T+ REC K
Sbjct: 148 ISCALVCRFMNVVASDETLWRRLYCMRWGLSCNTKLRECAWK 189
>05_04_0288 +
19839597-19839821,19841882-19842107,19842494-19842582,
19845184-19845387,19845463-19845717,19845796-19846011,
19846611-19846766,19846880-19847039,19847702-19847788,
19847789-19847940,19848006-19848143,19848714-19848788,
19849166-19849444
Length = 753
Score = 27.5 bits (58), Expect = 7.4
Identities = 20/94 (21%), Positives = 43/94 (45%)
Frame = +3
Query: 186 HNTHPNFAKLYRTGDFGILDKGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCV 365
++ HP+F +L RT I D + AG+ S + + R L+++ ST+ + N +
Sbjct: 363 YDVHPSFVELGRTTSMSISDSTLERLAGKVHSLNQEKKQR--LRKLQDLGSTLIELWNLM 420
Query: 366 VLCYGVESSNPEILAFVTINPEARMSAKNIEAEL 467
+ + + ++++P +M + EL
Sbjct: 421 DTPTAEQKCFDHVTSLISVSPSTKMPQGCLAREL 454
>02_05_0430 -
28923784-28923830,28923931-28924341,28924552-28924963,
28925000-28925542,28925790-28925884,28926003-28927033,
28927304-28927452,28927483-28927523,28927594-28928206
Length = 1113
Score = 27.5 bits (58), Expect = 7.4
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = -1
Query: 209 GKIRVSVMRVMDEAMRIFTAHI-SSSKIETSHTHL--TGFTFPNASHILIQKVN 57
GKI V + V DE +R+FT+ + + +K H + F+F + L Q+V+
Sbjct: 351 GKINVKIPTVPDELIRLFTSQVHNDAKYFRKHIRYFNSHFSFTSLGVTLDQRVS 404
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,157,365
Number of Sequences: 37544
Number of extensions: 365242
Number of successful extensions: 823
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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