Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_A14
(545 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18399| Best HMM Match : AMP-binding (HMM E-Value=0) 74 7e-14
SB_54338| Best HMM Match : Ligase_CoA (HMM E-Value=0) 48 7e-06
SB_18329| Best HMM Match : AMP-binding (HMM E-Value=2.7e-18) 40 0.001
SB_54379| Best HMM Match : AMP-binding (HMM E-Value=0.0023) 36 0.029
SB_53246| Best HMM Match : AMP-binding (HMM E-Value=7.8e-37) 35 0.050
SB_16214| Best HMM Match : AMP-binding (HMM E-Value=0) 35 0.050
SB_57182| Best HMM Match : AMP-binding (HMM E-Value=0) 34 0.066
SB_39565| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.066
SB_36835| Best HMM Match : AMP-binding (HMM E-Value=6.2e-13) 33 0.20
SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18) 31 0.46
SB_19092| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.81
SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4) 29 2.5
SB_19482| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.4e-11) 29 2.5
SB_57704| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 29 3.3
SB_45441| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_43771| Best HMM Match : AMP-binding (HMM E-Value=0.041) 28 4.3
SB_13709| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 5.7
SB_31957| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_42135| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_18399| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 1381
Score = 74.1 bits (174), Expect = 7e-14
Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 5/179 (2%)
Frame = +3
Query: 24 VPIGVPISNNYVYLLDENMRCVREGEPGEVCVAGFNLARGY--VRGKDPHRFIHNPHNTH 197
+ IG N ++LD + V + GE+C++G LARGY + K +F+ H H
Sbjct: 341 ITIGRAFGNYNAHILDSILVDVEGEKEGELCISGKCLARGYRNLPEKTKQQFVD--HQLH 398
Query: 198 PNFAKLYRTGDF-GILDKGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLC 374
++YRTGD G I Y GR D QVKIRG RV++ ++ + V V+
Sbjct: 399 ---GRIYRTGDLVRWTPDGEIEYLGRIDDQVKIRGFRVEIGSIETHLQRQENVKMAAVVV 455
Query: 375 YGVESSNPEILAFVTINPEAR-MSAKNIEAELTSSLTDYMIPQ-VIEIETVPVLVNGKV 545
++A +T+ + + A+ ++ +L +YMIP I E +P L +GKV
Sbjct: 456 LSPSPGQQLVVAHLTLVDKTKGFQAQQAVVKMKIALPEYMIPNGYIIHEELPTLASGKV 514
>SB_54338| Best HMM Match : Ligase_CoA (HMM E-Value=0)
Length = 445
Score = 47.6 bits (108), Expect = 7e-06
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 3/146 (2%)
Frame = +3
Query: 57 VYLLDENMRCVREGEPGEVCVAGFNLARGYVRG--KDPHRFIHNPHNTHPNFAKLYRTGD 230
V +LD + V GE G + + L G + ++ RF NT+ + Y +GD
Sbjct: 301 VQILDAKGKPVAAGEQGSIAIK-LPLPPGCLPTIWRNHERFEAGYLNTYKGY---YVSGD 356
Query: 231 FGILDK-GVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEIL 407
G+LD G + GR D + + GHR+ E++ V+ V C V+ E L
Sbjct: 357 GGMLDNDGYLFVLGRTDDIINVAGHRLSTGEMEEVVAGHDAVAECAVIGQNSALKGEEPL 416
Query: 408 AFVTINPEARMSAKNIEAELTSSLTD 485
V + + + ++ EL + D
Sbjct: 417 GLVLLKDGVDIDEEQLKKELVQRVRD 442
>SB_18329| Best HMM Match : AMP-binding (HMM E-Value=2.7e-18)
Length = 1076
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/107 (23%), Positives = 52/107 (48%)
Frame = +3
Query: 24 VPIGVPISNNYVYLLDENMRCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPN 203
+PIG P+ + V + DE + + G + + Y+ G + F++N + P
Sbjct: 294 IPIGEPLQDTLVDIRDEEGKKISHG-----------IGQMYIGGHNRICFLNNEMDVSPG 342
Query: 204 FAKLYRTGDFGILDKGVILYAGRADSQVKIRGHRVDLQEVDHAVSTI 344
+ +GD+ +++ I + GR D Q+K G R +L ++ A++ +
Sbjct: 343 TMRA--SGDWALINNDQIWFLGRKDRQIKRLGQRTNLLWIEQALARV 387
>SB_54379| Best HMM Match : AMP-binding (HMM E-Value=0.0023)
Length = 277
Score = 35.5 bits (78), Expect = 0.029
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Frame = +3
Query: 96 GEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAKLYRTGDFGILDKGVILY-AGR 272
G+ GE+C+ G + +GY+ + NT + L+ TGD G D Y GR
Sbjct: 112 GKQGEICIKGPLMMKGYLNNPEA------TANTIDHEGWLH-TGDIGYYDDQEHFYIVGR 164
Query: 273 ADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVTI 422
+K +G +V E++ + + P + + V+ E + AFV +
Sbjct: 165 VKELIKYKGFQVPPAELEDLLQSHPDIADAAVIGVPDEEAGELPKAFVVL 214
>SB_53246| Best HMM Match : AMP-binding (HMM E-Value=7.8e-37)
Length = 497
Score = 34.7 bits (76), Expect = 0.050
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Frame = +3
Query: 42 ISNNYVYLLDENMRCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTH--PNFAKL 215
+ N V ++ + + VR G PGE+CV L + YV NP T
Sbjct: 308 LPGNEVKIVGDEDKIVRRGTPGEICVRTAMLFQEYV---------GNPEATKRAKTATGW 358
Query: 216 YRTGDFGILDK-GVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESS 392
YR GD ++D+ G I GR +K ++ E++ V V + VV+ +
Sbjct: 359 YRLGDICVMDESGKIKVLGREKDFIKRATVKIFPAEIERVVLQHADVADVVVVGVPDQRF 418
Query: 393 NPEILAFVTI 422
+ EI A V +
Sbjct: 419 HEEICACVIL 428
>SB_16214| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 549
Score = 34.7 bits (76), Expect = 0.050
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 3/130 (2%)
Frame = +3
Query: 42 ISNNYVYLLDENMRCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTH--PNFAKL 215
+ N V ++ + + VR G PGE+CV L + YV NP T
Sbjct: 360 LPGNEVKIVGDEDKIVRRGTPGEICVRTAMLFQEYV---------GNPEATKRAKTATGW 410
Query: 216 YRTGDFGILDK-GVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESS 392
YR GD ++D+ G I GR +K ++ E++ V V + VV+ +
Sbjct: 411 YRLGDICVMDESGKIKVLGREKDFIKRATVKIFPAEIERVVLQHADVADVVVVGVPDQRF 470
Query: 393 NPEILAFVTI 422
+ EI A V +
Sbjct: 471 HEEICACVIL 480
>SB_57182| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 566
Score = 34.3 bits (75), Expect = 0.066
Identities = 32/147 (21%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Frame = +3
Query: 63 LLDENMRCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAKLYRTGDFGIL 242
++D+ V GE GE+CV + GY+ ++ + + +P R GD G++
Sbjct: 387 IIDDKGCLVPRGEMGEICVRNECVFMGYLGQEETTKKVKSPDG-------WIRMGDLGVM 439
Query: 243 D-KGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVT 419
D +G + GR +K ++ E++ ++ P + VV+ + EI A V
Sbjct: 440 DEEGRLQVLGRKVEVIKKASVKIVPGEIEASLMQHPLLARAVVIGVPDQVFYQEICACVE 499
Query: 420 INPEARMSAKNIEAELTSSLTDYMIPQ 500
+ + ++ I EL + ++ P+
Sbjct: 500 FHGKGEDASTKI-MELDNWCIEHFPPR 525
>SB_39565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 34.3 bits (75), Expect = 0.066
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Frame = +3
Query: 57 VYLLDENMRCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAKLYRTGDFG 236
V ++D N + V GEPGE+C + GY+ + +P T D G
Sbjct: 52 VKIVDANNKVVPRGEPGEICCRSECVFLGYLGNLEATSRAKSPQG-------WLHTEDLG 104
Query: 237 IL-DKGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAF 413
+ D+G+I GR +K ++ E+ + P V + +V+ + + EI A
Sbjct: 105 TMDDQGMIEVIGRTSEIIKRATVKIFPGEIKAELLKNPLVADAIVIGVPDQRLHEEICAC 164
Query: 414 V 416
V
Sbjct: 165 V 165
>SB_36835| Best HMM Match : AMP-binding (HMM E-Value=6.2e-13)
Length = 874
Score = 32.7 bits (71), Expect = 0.20
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +3
Query: 30 IGVPISNNYVYLLD-ENMRCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNF 206
+GV + N ++D + V +G+ GE+C+ G + +GY+ K+P T +
Sbjct: 206 VGVLLPNLECKIIDLSSGEEVEQGKEGEICIRGPTVMKGYL--KNPEA----TARTLDSE 259
Query: 207 AKLYRTGDFGILDKGVILY-AGRADSQVKIRGHRV 308
L+ TGD G D+G Y R +K +G +V
Sbjct: 260 GWLH-TGDIGHCDQGDFFYITDRLKELIKYKGFQV 293
>SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18)
Length = 817
Score = 31.5 bits (68), Expect = 0.46
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 216 YRTGDFGILDK-GVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVL 371
Y TGD + D+ G + + GR+D + G+R+ EV+ A+ P V V+
Sbjct: 432 YLTGDRAVRDEDGYLWFIGRSDDVIISAGYRIGPFEVESALIEHPAVAEAAVV 484
>SB_19092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 30.7 bits (66), Expect = 0.81
Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 1/127 (0%)
Frame = +3
Query: 57 VYLLDENMRCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAKLYRTGDFG 236
V ++D + + V G+PGE+C + GY+ + + +P T D G
Sbjct: 46 VKIVDTDGKVVPRGQPGEICCRSECVFLGYLGNPEATSRVKSPQG-------WLHTEDLG 98
Query: 237 IL-DKGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAF 413
+ D+ +I GR +K ++ E+ + P V + +V+ + + EI A
Sbjct: 99 TMDDQDMIEVTGRKSEIIKRATVKIFPGEIRAELVKNPIVADTIVIGVPDKMLHEEICAC 158
Query: 414 VTINPEA 434
V + A
Sbjct: 159 VVLRKNA 165
>SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4)
Length = 242
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 372 TKRHNYPHTG**RQHDLPPAGQHGDPLS*PESQHDPHT 259
T+ + PHT R H P QH ++QH PHT
Sbjct: 141 TRTRHEPHTDTTRTHTDPTQTQHRPNTDPTQTQHRPHT 178
>SB_19482| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.4e-11)
Length = 431
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +3
Query: 399 EILAFVTINPEARMSAKNIEAELTSSLTDYMIPQVIEIE 515
E++ +P R++ +N+E E+TS ++ + P+V +I+
Sbjct: 187 EVMRKCWADPNKRLTIRNVETEITSLMSQELGPRVHQIQ 225
>SB_57704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 3 QMHIFLTVPIGVPISNNYVYLLD-ENMRCVREGEPGEVCVAGFNLARGYV 149
QM + +G P+ V L+D M GE+C+ G N+ +GY+
Sbjct: 133 QMRHGMLCHVGAPVPCATVKLVDVPEMDYYASNNQGEICIRGRNVFKGYL 182
>SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 379
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 274 ARPAYKITPLSRMPKSPVRYSL 209
ARP+Y PLSR+P SP SL
Sbjct: 314 ARPSYLYKPLSRIPTSPSLVSL 335
>SB_45441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 30 IGVPISNNYVYLLD-ENMRCVREGEPGEVCVAGFNLARGY 146
+G N ++D E+ V PGE+C G+N+ +GY
Sbjct: 52 VGTMAPNVEAKIIDSEHGNVVPINTPGEICFRGYNVMQGY 91
>SB_43771| Best HMM Match : AMP-binding (HMM E-Value=0.041)
Length = 339
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 30 IGVPISNNYVYLLD-ENMRCVREGEPGEVCVAGFNLARGY 146
+G N ++D E+ V PGE+C G+N+ +GY
Sbjct: 174 VGTMAPNVEAKIIDSEHGNVVPINTPGEICFRGYNVMQGY 213
>SB_13709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -3
Query: 327 DLPPAGQHGDPLS*PESQHDPHTRSRLYPGCRNHQCDTV 211
D PPA P S P ++ + S PGC NH D++
Sbjct: 87 DFPPASGGAVPWSRPPARFNFFFSSVHIPGCNNHIADSL 125
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 27.9 bits (59), Expect = 5.7
Identities = 34/128 (26%), Positives = 46/128 (35%), Gaps = 7/128 (5%)
Frame = -3
Query: 414 QTPESRDYCFPRRSTKRHNYPHTG**RQHDLPPAG-QHGDPLS*PESQHDPHTRSRLYPG 238
+TP D R+ H+ T HD P QHG + ++QH PHT P
Sbjct: 71 RTPHGHD-TDTTRTRHGHDTDTTRTPHGHDTDPTQTQHGHDTNPTQTQHGPHTNPTQTP- 128
Query: 237 CRNHQCDTVW----QN*GECYEGYG*SDADLYRAHIL*QD*NQPHTPHRVHL-PERIAYS 73
D W N +G + H D TPHR H+ P R ++
Sbjct: 129 -HGPHTDPTWTPHRPNTDPTRTPHGPHTDPTWTPHRPHMD--PTRTPHRPHMDPTRTSHG 185
Query: 72 -HPEGKRN 52
H + RN
Sbjct: 186 PHTDPTRN 193
>SB_31957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 27.9 bits (59), Expect = 5.7
Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 3/140 (2%)
Frame = +3
Query: 57 VYLLDENMRCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTH--PNFAKLYRTGD 230
V ++ + V G PGE+CV + YV NP T +R GD
Sbjct: 354 VKIVGDGDEVVPRGTPGEICVRSAMVFSEYV---------GNPEATKQAKTATGWFRLGD 404
Query: 231 FGIL-DKGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEIL 407
G++ + G + GR +K ++ +++ + V + VV + + EI
Sbjct: 405 IGVMNESGKVKVLGRKKDFIKRATLKISSLQIEKVILGHADVSDAVVFGVPDQQLHEEIC 464
Query: 408 AFVTINPEARMSAKNIEAEL 467
A V + +A + + +E L
Sbjct: 465 ACVIL--KAANNDRGLEVRL 482
>SB_42135| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 174 IHNPHNTHPNFAKLYRTGDFGILDKGVILYAGRADSQVKIRGH 302
I +PHN + K+ TG F + + G Y R ++ IRGH
Sbjct: 7 IGSPHNKGSH--KVQNTGSFEVHNTGHTKYTIRGHTKYTIRGH 47
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,118,487
Number of Sequences: 59808
Number of extensions: 439264
Number of successful extensions: 1159
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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