Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_A14
(545 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g35930.1 68418.m04322 AMP-dependent synthetase and ligase fam... 78 3e-15
At3g21230.1 68416.m02683 4-coumarate--CoA ligase, putative / 4-c... 54 6e-08
At1g51680.1 68414.m05822 4-coumarate--CoA ligase 1 / 4-coumaroyl... 50 1e-06
At3g48990.1 68416.m05351 AMP-dependent synthetase and ligase fam... 50 1e-06
At4g05160.1 68417.m00775 4-coumarate--CoA ligase, putative / 4-c... 46 2e-05
At3g21240.1 68416.m02684 4-coumarate--CoA ligase 2 / 4-coumaroyl... 45 4e-05
At1g20560.1 68414.m02563 AMP-dependent synthetase and ligase fam... 45 4e-05
At5g38120.1 68418.m04592 4-coumarate--CoA ligase family protein ... 40 0.001
At5g36880.1 68418.m04418 acetyl-CoA synthetase, putative / aceta... 38 0.004
At5g16340.1 68418.m01910 AMP-binding protein, putative similar t... 37 0.010
At1g77590.1 68414.m09034 long-chain-fatty-acid--CoA ligase famil... 36 0.018
At1g51680.2 68414.m05823 4-coumarate--CoA ligase 1 / 4-coumaroyl... 34 0.071
At1g65060.1 68414.m07375 4-coumarate--CoA ligase 3 / 4-coumaroyl... 33 0.12
At5g27600.1 68418.m03305 AMP-binding protein, putative similar t... 32 0.29
At2g47240.1 68415.m05899 long-chain-fatty-acid--CoA ligase famil... 32 0.29
At5g66290.1 68418.m08358 expressed protein 30 1.2
At1g70710.1 68414.m08151 endo-1,4-beta-glucanase (EGASE) / cellu... 30 1.2
At4g19470.1 68417.m02864 disease resistance protein-related simi... 29 1.5
At4g34100.1 68417.m04838 zinc finger (C3HC4-type RING finger) fa... 28 3.5
At1g40230.1 68414.m04784 hypothetical protein 28 4.7
At2g20210.1 68415.m02363 leucine-rich repeat family protein cont... 27 6.2
At1g62700.1 68414.m07077 no apical meristem (NAM) family protein... 27 6.2
>At5g35930.1 68418.m04322 AMP-dependent synthetase and ligase family
protein similar to iturin A synthetase C [Bacillus
subtilis] GI:16040972; contains Pfam profile PF00501:
AMP-binding enzyme
Length = 1040
Score = 78.2 bits (184), Expect = 3e-15
Identities = 61/188 (32%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Frame = +3
Query: 21 TVPIGVPISNNYVYLLDENMRCVREGEPGEVCVAGFNLARGYVRGK---DPHRFIHNP-- 185
+VPIG ISN V LL + + GE+CV+G L++GY+ + + +HN
Sbjct: 284 SVPIGKSISNCKVVLLGDEDKPYE----GEICVSGLCLSQGYMHSSIESEGYVKLHNNSL 339
Query: 186 --HNTHPNFAKLY-RTGDFGI-LDKGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCV 353
H T+ ++LY RTGD+G L G +++ GR D VK+ G R+ L+E++ + P +
Sbjct: 340 CNHLTNDCGSQLYYRTGDYGRQLSSGDLIFIGRRDRTVKLNGKRMALEEIETTLELNPDI 399
Query: 354 DNCVVLCYGVESSNPEILAFVTINPEARMS---AKNIEAELTSSLTDYMIP-QVIEIETV 521
VVL E+ + AFV +N E+ S +I + L MIP + +E +
Sbjct: 400 AEAVVLLSRDETELASLKAFVVLNKESNSSDGIIFSIRNWMGGKLPPVMIPNHFVLVEKL 459
Query: 522 PVLVNGKV 545
P+ +GKV
Sbjct: 460 PLTSSGKV 467
>At3g21230.1 68416.m02683 4-coumarate--CoA ligase, putative /
4-coumaroyl-CoA synthase, putative (4CL) similar to 4CL2
[gi:12229665] and 4CL1 [gi:12229649] from [Arabidopsis
thaliana], 4CL1 [gi:12229631] from Nicotiana tabacum
Length = 570
Score = 54.0 bits (124), Expect = 6e-08
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 5/176 (2%)
Frame = +3
Query: 33 GVPISNNYVYLLD-ENMRCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFA 209
G I N + ++D E + + GE+CV G L +GY +++P T
Sbjct: 389 GTVIRNAEMKVVDTETGISLPRNKSGEICVRGHQLMKGY---------LNDPEATARTID 439
Query: 210 K--LYRTGDFGIL-DKGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYG 380
K TGD G + D I R +K +G++V E++ + + P +D+ V+
Sbjct: 440 KDGWLHTGDIGFVDDDDEIFIVDRLKELIKFKGYQVAPAELEALLISHPSIDDAAVVAMK 499
Query: 381 VESSNPEILAFVTINPEARMSAKNIEAELTSSLTDY-MIPQVIEIETVPVLVNGKV 545
E ++ +AFV + ++++ ++++ + + Y I V IE +P V+GK+
Sbjct: 500 DEVADEVPVAFVARSQGSQLTEDDVKSYVNKQVVHYKRIKMVFFIEVIPKAVSGKI 555
>At1g51680.1 68414.m05822 4-coumarate--CoA ligase 1 /
4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524
4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)
(4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}
Length = 561
Score = 50.0 bits (114), Expect = 1e-06
Identities = 39/176 (22%), Positives = 82/176 (46%), Gaps = 5/176 (2%)
Frame = +3
Query: 33 GVPISNNYVYLLDENMR-CVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFA 209
G + N + ++D + + +PGE+C+ G + +GY ++NP T
Sbjct: 382 GTVVRNAEMKIVDPDTGDSLSRNQPGEICIRGHQIMKGY---------LNNPAATAETID 432
Query: 210 K--LYRTGDFGILDKGVILY-AGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYG 380
K TGD G++D L+ R +K +G +V E++ + P + + V+
Sbjct: 433 KDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMK 492
Query: 381 VESSNPEILAFVTINPEARMSAKNIEAELTSSLTDY-MIPQVIEIETVPVLVNGKV 545
E++ +AFV + ++ +S +++ ++ + Y I +V E++P +GK+
Sbjct: 493 EEAAGEVPVAFVVKSKDSELSEDDVKQFVSKQVVFYKRINKVFFTESIPKAPSGKI 548
>At3g48990.1 68416.m05351 AMP-dependent synthetase and ligase family
protein similar to peroxisomal-coenzyme A synthetase
(FAT2) [gi:586339] from Saccharomyces cerevisiae;
contains Pfam AMP-binding enzyme domain PF00501;
identical to cDNA; identical to cDNA adenosine
monophosphate binding protein 3 AMPBP3
(AMPBP3)GI:20799714
Length = 514
Score = 49.6 bits (113), Expect = 1e-06
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 3/175 (1%)
Frame = +3
Query: 30 IGVPISNNYVYLLDENMRCVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFA 209
+G P+ +L+E GEVC+ G N+ +GY +NP F
Sbjct: 337 VGKPVGQEMA-ILNEKGEIQEPNNKGEVCIRGPNVTKGYK---------NNPEANKAGFE 386
Query: 210 -KLYRTGDFGILD-KGVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGV 383
+ TGD G D G + GR + G ++ EVD + T P V V
Sbjct: 387 FGWFHTGDIGYFDTDGYLHLVGRIKELINRGGEKISPIEVDAVLLTHPDVSQGVAFGVPD 446
Query: 384 ESSNPEILAFVTINPEARMSAKNIEAELTSSLTDYMIPQVIEI-ETVPVLVNGKV 545
E EI V ++ ++I+A +L + +P+ + I + +P +GK+
Sbjct: 447 EKYGEEINCAVIPREGTTVTEEDIKAFCKKNLAAFKVPKRVFITDNLPKTASGKI 501
>At4g05160.1 68417.m00775 4-coumarate--CoA ligase, putative /
4-coumaroyl-CoA synthase, putative similar to 4CL2
[gi:12229665] from Arabidopsis thaliana, 4CL1
[gi:12229631] from Nicotiana tabacum; contains Pfam
AMP-binding enzyme domain PF00501; acyl-activating
enzyme superfamily; identical to cDNA 4-coumarate-CoA
ligase-like protein (At4g05160) GI:29893226
Length = 544
Score = 45.6 bits (103), Expect = 2e-05
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Frame = +3
Query: 99 EPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAK--LYRTGDFGILDKGVILY-AG 269
+ GE+ V G N+ +GY ++NP T K TGD G ++ LY
Sbjct: 388 QQGEIWVRGPNMMKGY---------LNNPQATKETIDKKSWVHTGDLGYFNEDGNLYVVD 438
Query: 270 RADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVTINPEARMSAK 449
R +K +G +V E++ + + P + + VV+ + E + +AFV +P + ++ +
Sbjct: 439 RIKELIKYKGFQVAPAELEGLLVSHPDILDAVVIPFPDEEAGEVPIAFVVRSPNSSITEQ 498
Query: 450 NIEAELTSSLTDY-MIPQVIEIETVPVLVNGKV 545
+I+ + + Y + +V I VP GK+
Sbjct: 499 DIQKFIAKQVAPYKRLRRVSFISLVPKSAAGKI 531
>At3g21240.1 68416.m02684 4-coumarate--CoA ligase 2 /
4-coumaroyl-CoA synthase 2 (4CL2) identical to SP|Q9S725
4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2)
(4-coumaroyl-CoA synthase 2) {Arabidopsis thaliana}
Length = 556
Score = 44.8 bits (101), Expect = 4e-05
Identities = 39/176 (22%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Frame = +3
Query: 33 GVPISNNYVYLLDENMR-CVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFA 209
G + N + +LD + + +PGE+C+ G + +GY +++P T
Sbjct: 375 GTVVRNAEMKILDPDTGDSLPRNKPGEICIRGNQIMKGY---------LNDPLATASTID 425
Query: 210 K--LYRTGDFGILDKGVILY-AGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYG 380
K TGD G +D L+ R +K +G +V E++ + P +++ V+
Sbjct: 426 KDGWLHTGDVGFIDDDDELFIVDRLKELIKYKGFQVAPAELESLLIGHPEINDVAVVAMK 485
Query: 381 VESSNPEILAFVTINPEARMSAKNIEAELTSSLTDY-MIPQVIEIETVPVLVNGKV 545
E + +AFV + ++ +S I+ ++ + Y I +V +++P +GK+
Sbjct: 486 EEDAGEVPVAFVVRSKDSNISEDEIKQFVSKQVVFYKRINKVFFTDSIPKAPSGKI 541
>At1g20560.1 68414.m02563 AMP-dependent synthetase and ligase family
protein similar to AMP-binding protein GI:1903034 from
[Brassica napus]; contains Pfam AMP-binding domain
PF00501; identical to adenosine monophosphate binding
protein 1 AMPBP1 (AMPBP1) GI:20799710
Length = 556
Score = 44.8 bits (101), Expect = 4e-05
Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Frame = +3
Query: 171 FIHNPHNTHPNF-AKLYRTGDFGILDK-GVILYAGRADSQVKIRGHRVDLQEVDHAVSTI 344
++ NP T F + +GD G+ G I R+ + G + EV+ + T
Sbjct: 407 YLKNPEATKEAFKGGWFWSGDLGVKHPDGYIELKDRSKDIIISGGENISSIEVESTLFTH 466
Query: 345 PCVDNCVVLCYGVESSNPEILAFVTINPEARMSAKNIEAELTSSLTDYMIPQVIEIETVP 524
PCV V+ E AFV + ++ SA+ + + L YM P+ I E +P
Sbjct: 467 PCVLEAAVVARPDEYWGETACAFVKLKDGSKASAEELISYCRDRLPHYMAPRSIVFEDLP 526
Query: 525 VLVNGKV 545
GKV
Sbjct: 527 KTSTGKV 533
>At5g38120.1 68418.m04592 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to 4CL2,
Arabidopsis thaliana [gi:12229665], 4CL1, Nicotiana
tabacum [gi:12229631]; contains Pfam AMP-binding enzyme
domain PF00501
Length = 550
Score = 39.9 bits (89), Expect = 0.001
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Frame = +3
Query: 99 EPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAKLYRTGDFGILDK-GVILYAGRA 275
+ GE+ + G ++A+GY R ++ I T + K TGD +D G + R
Sbjct: 397 QTGELWLKGPSIAKGYFRNEE--EII-----TSEGWLK---TGDLCYIDNDGFLFIVDRL 446
Query: 276 DSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVTINPEARMSAKNI 455
+K +G++V E++ + P + + V+ + + + +A+V PE+ + K +
Sbjct: 447 KELIKYKGYQVPPAELEALLLNHPDILDAAVIPFPDKEAGQFPMAYVARKPESNLCEKKV 506
Query: 456 EAELTSSLTDY-MIPQVIEIETVPVLVNGK 542
++ + Y I +V I+++P +GK
Sbjct: 507 IDFISKQVAPYKKIRKVAFIDSIPKTPSGK 536
>At5g36880.1 68418.m04418 acetyl-CoA synthetase, putative /
acetate-CoA ligase, putative similar to SP|P27550
(Escherichia coli) and gi:8439651 (Homo sapiens);
contains Pfam AMP-binding enzyme domain PF00501
Length = 693
Score = 37.9 bits (84), Expect = 0.004
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +3
Query: 204 FAKLYRTGDFGILDK-GVILYAGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYG 380
FA Y +GD DK G GR D + + GHR+ EV+ A+ P V+
Sbjct: 538 FAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVLHPQCAEAAVVGIE 597
Query: 381 VESSNPEILAFVTI 422
E I AFVT+
Sbjct: 598 HEVKGQGIYAFVTL 611
>At5g16340.1 68418.m01910 AMP-binding protein, putative similar to
AMP-binding protein GI:1903034 from [Brassica napus];
contains Pfam AMP-binding domain PF00501; identical to
adenosine monophosphate binding protein 6 AMPBP6
(AMPBP6) GI:20799720
Length = 550
Score = 36.7 bits (81), Expect = 0.010
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 7/159 (4%)
Frame = +3
Query: 90 REGEP-GEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAKLYRTGDFGILDK-GVILY 263
R GE GE+ + G ++ GY+ KDP N + TGD G++ G +
Sbjct: 384 RNGETVGEIVMRGSSVMLGYL--KDPVGTEKALKNGW------FYTGDVGVIHSDGYLEI 435
Query: 264 AGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVTINPEARMS 443
R+ + G V EV+ + TIP V+ V+ E AFV++ + S
Sbjct: 436 KDRSKDIIITGGENVSSVEVETVLYTIPAVNEVAVVARPDEFWGETPCAFVSL--KNGFS 493
Query: 444 AKNIEAEL----TSSLTDYMIPQVIE-IETVPVLVNGKV 545
K E EL + YM+P+ + ++ +P GKV
Sbjct: 494 GKPTEEELMEYCRKKMPKYMVPKTVSFMDELPKSSTGKV 532
>At1g77590.1 68414.m09034 long-chain-fatty-acid--CoA ligase family
protein / long-chain acyl-CoA synthetase family protein
(LACS9) similar to LACS 3 [SP|O95573] from Homo Sapiens,
LACS 3 [SP|Q63151] from Rattus norvegicus; contains Pfam
HMM hit: AMP-binding enzymes PF00501
Length = 691
Score = 35.9 bits (79), Expect = 0.018
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Frame = +3
Query: 30 IGVPISNNYVYLLD-ENMRCVREGEP---GEVCVAGFNLARGYVRGKDPHRFIHNPHNTH 197
+G P+ ++V L+D + +P GE+ + G N+ GY + ++ + + +
Sbjct: 469 VGAPLPCSFVKLVDWAEGGYLTSDKPMPRGEIVIGGSNITLGYFKNEEKTKEV---YKVD 525
Query: 198 PNFAKLYRTGDFG-ILDKGVILYAGRADSQVKIR-GHRVDLQEVDHAVSTIPCVDNCVV 368
+ + TGD G G + R VK++ G V L +V+ A+S P V+N +V
Sbjct: 526 EKGMRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSISPYVENIMV 584
>At1g51680.2 68414.m05823 4-coumarate--CoA ligase 1 /
4-coumaroyl-CoA synthase 1 (4CL1) identical to SP|Q42524
4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)
(4-coumaroyl-CoA synthase 1) {Arabidopsis thaliana}
Length = 490
Score = 33.9 bits (74), Expect = 0.071
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Frame = +3
Query: 33 GVPISNNYVYLLDENMR-CVREGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFA 209
G + N + ++D + + +PGE+C+ G + +GY ++NP T
Sbjct: 382 GTVVRNAEMKIVDPDTGDSLSRNQPGEICIRGHQIMKGY---------LNNPAATAETID 432
Query: 210 K--LYRTGDFGILDKGVILY-AGRADSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVL 371
K TGD G++D L+ R +K +G +V E++ + P + + V+
Sbjct: 433 KDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVV 489
>At1g65060.1 68414.m07375 4-coumarate--CoA ligase 3 /
4-coumaroyl-CoA synthase 3 (4CL3) identical to SP|Q9S777
4-coumarate--CoA ligase 3 (EC 6.2.1.12) (4CL 3)
(4-coumaroyl-CoA synthase 3) {Arabidopsis thaliana}
Length = 561
Score = 33.1 bits (72), Expect = 0.12
Identities = 31/151 (20%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
Frame = +3
Query: 99 EPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAKLYRTGDFGILDK-GVILYAGRA 275
+PGE+C+ G + + Y+ DP T L+ TGD G +D+ I R
Sbjct: 408 QPGEICIRGQQIMKEYL--NDPEA----TSATIDEEGWLH-TGDIGYVDEDDEIFIVDRL 460
Query: 276 DSQVKIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVTINPEARMSAKNI 455
+K +G +V E++ + + + V+ E + +AFV + ++ +++
Sbjct: 461 KEVIKFKGFQVPPAELESLLINHHSIADAAVVPQNDEVAGEVPVAFVVRSNGNDITEEDV 520
Query: 456 EAELTSSLTDY-MIPQVIEIETVPVLVNGKV 545
+ + + Y + +V + ++P +GK+
Sbjct: 521 KEYVAKQVVFYKRLHKVFFVASIPKSPSGKI 551
>At5g27600.1 68418.m03305 AMP-binding protein, putative similar to
AMP-binding protein (MF39P) gi:1617274 from Brassica
napus, long-chain-fatty-acid--CoA ligase - Brassica
napus, EMBL:Z72152; contains Pfam AMP-binding enzyme
domain PF00501
Length = 700
Score = 31.9 bits (69), Expect = 0.29
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Frame = +3
Query: 30 IGVPISNNYVYLLD-ENMRCVREGEP---GEVCVAGFNLARGYVRGKDPHRFIHNPHNTH 197
+G P V L+D M + +P GE+CV G + +GY + ++ R I +
Sbjct: 470 VGSPNPACEVKLVDVPEMNYTSDDQPYPRGEICVRGPIIFKGYYKDEEQTREILDGDG-- 527
Query: 198 PNFAKLYRTGDFGI-LDKGVILYAGRADSQVKI-RGHRVDLQEVDHAVSTIPCVDNCVVL 371
TGD G+ L G + R + K+ +G + +++++ + V C +
Sbjct: 528 -----WLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYTKCRFVSQCFI- 581
Query: 372 CYGVESSNPEILAFVTINPE 431
+G +S N ++A V+++PE
Sbjct: 582 -HG-DSFNSSLVAIVSVDPE 599
>At2g47240.1 68415.m05899 long-chain-fatty-acid--CoA ligase family
protein / long-chain acyl-CoA synthetase family protein
similar to GI:1617270 (MF7P) and gi:1617628 (MF45P) from
[Brassica napus] ; contains Pfam AMP-binding enzyme
domain PF00501
Length = 660
Score = 31.9 bits (69), Expect = 0.29
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = +3
Query: 93 EGEPGEVCVAGFNLARGYVRGKDPHRFIHNPHNTHPNFAK-LYRTGDFG-ILDKGVILYA 266
E GE+C+ G + GY + NP T + TGD G IL GV+
Sbjct: 462 ENPAGEICIRGQCMFSGYYK---------NPELTEEVMKDGWFHTGDIGEILPNGVLKII 512
Query: 267 GRADSQVKI-RGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVTINPE 431
R + +K+ +G V L+ +++ V + + YG +S ++A V NPE
Sbjct: 513 DRKKNLIKLSQGEYVALEHLENIFGQNSVVQD--IWVYG-DSFKSMLVAVVVPNPE 565
>At5g66290.1 68418.m08358 expressed protein
Length = 202
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +3
Query: 288 KIRGHRVDLQEVDHAVSTIPCVDNCVVLCYGVESSNPEILAFVTINPEARMSAKNIEAEL 467
++ G +V+L E+ ++ + + NC LC + S PE L T+ P + S ++
Sbjct: 136 QVHGLQVELGELKGRLTEV--ISNCDTLCKRINSEGPESLR-STVAPFSLASPDSVSINT 192
Query: 468 TSSLT 482
T++L+
Sbjct: 193 TTTLS 197
>At1g70710.1 68414.m08151 endo-1,4-beta-glucanase (EGASE) /
cellulase identical to endo-1,4-beta-glucanase
GB:CAA67157 GI:2440035 from [Arabidopsis thaliana]
Length = 492
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 527 NRYRFDFNNLRYHVICEGTCQFSLY 453
NRYR ++N YH +C C F+ Y
Sbjct: 211 NRYRGAYSNSLYHAVCPFYCDFNGY 235
>At4g19470.1 68417.m02864 disease resistance protein-related similar
to disease resistance protein RPS4-Ler
(GI:5823587)[Arabidopsis thaliana]; similar to TMV
resistance protein N, Nicotiana glutinosa, PIR2:A54810;
contains Pfam PF00560: Leucine Rich Repeat domains
Length = 417
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -1
Query: 482 CEGTCQFSLYVFSGHSRFWVDCDKRQNLGITAFHAVAQNDTIIH 351
C T F +V G ++ +DC + G++ +A +ND +H
Sbjct: 298 CNTTASFKFFVTDGRAKRKLDCCEVVKCGMSLLYAPDENDCRLH 341
>At4g34100.1 68417.m04838 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 1092
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 218 IQFGKIRVSVMRVMDEAMRIFTAHISSSKIETSHTH 111
I F R++ +R EA R+F +HIS++ I T H
Sbjct: 169 ITFWIWRLAFVRTFGEAQRLFLSHISTTVILTDCLH 204
>At1g40230.1 68414.m04784 hypothetical protein
Length = 303
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 126 NQPHTPHRVHLPERIAYSHPEGKRNCSISVHQ*VL*EIYAF 4
N P +P VH PE +++SH + S V + L IYA+
Sbjct: 224 NSPFSPFVVHPPELLSHSHEHSTAHLSTGVRR--LSIIYAY 262
>At2g20210.1 68415.m02363 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 604
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/63 (23%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +3
Query: 282 QVKIRGH---RVDLQEVDHAVSTIPCVDNCVVLCYGVESSN-PEILAFVTINPEARMSAK 449
++ +RG+ R D + + HA+ +P +++ + +E S ++++ T NP++R++
Sbjct: 359 KLNLRGNELDRYDAENLAHALLHMPGLESLDLSGNPIEDSGIRSLISYFTKNPDSRLADL 418
Query: 450 NIE 458
N+E
Sbjct: 419 NLE 421
>At1g62700.1 68414.m07077 no apical meristem (NAM) family protein
similar to NAC2 (GI:6456751) [Arabidopsis thaliana];
contains Pfam PF02365 : No apical meristem (NAM) protein
Length = 394
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 533 HQNRYRFDFNNLRYHVICEG 474
HQN + D N YHVI EG
Sbjct: 341 HQNNVKIDTRNTGYHVIDEG 360
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,971,166
Number of Sequences: 28952
Number of extensions: 288072
Number of successful extensions: 768
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1023490624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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