Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_A13
         (379 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29609-1|CAA82726.1|   98|Homo sapiens immunoglobulin heavy chai...    29   3.8  
Z27511-1|CAA81831.1|   98|Homo sapiens Ig H-chain V-region (DP-8...    29   3.8  

>Z29609-1|CAA82726.1|   98|Homo sapiens immunoglobulin heavy chain
           variable region (HC16-12) protein.
          Length = 98

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +2

Query: 227 VESAGRSNG*PKGLLSITKASNG--VRSWLLDSNGYTKTKELEWISTFSTS 373
           VES GR    P G L ++ A++G  V SW +        K LEW+S  S+S
Sbjct: 5   VES-GRGLAQPGGYLKLSGAASGFTVGSWYMSWIHQAPGKGLEWVSYISSS 54


>Z27511-1|CAA81831.1|   98|Homo sapiens Ig H-chain V-region (DP-84)
           protein.
          Length = 98

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +2

Query: 227 VESAGRSNG*PKGLLSITKASNG--VRSWLLDSNGYTKTKELEWISTFSTS 373
           VES GR    P G L ++ A++G  V SW +        K LEW+S  S+S
Sbjct: 5   VES-GRGLAQPGGYLKLSGAASGFTVGSWYMSWIHQAPGKGLEWVSYISSS 54


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,965,866
Number of Sequences: 237096
Number of extensions: 1057714
Number of successful extensions: 2138
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2138
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)