Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_A12
         (350 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclas...    29   0.71 
Z78066-8|CAE48546.1|  204|Caenorhabditis elegans Hypothetical pr...    28   1.6  
Z78066-7|CAE48544.1|  570|Caenorhabditis elegans Hypothetical pr...    28   1.6  
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr...    28   1.6  
Z78066-5|CAB01523.1|  222|Caenorhabditis elegans Hypothetical pr...    28   1.6  
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr...    28   1.6  
AL034488-8|CAE46690.1|  395|Caenorhabditis elegans Hypothetical ...    28   1.6  
AL034488-7|CAA22452.1|  396|Caenorhabditis elegans Hypothetical ...    28   1.6  
AF039710-10|AAB96693.2|  393|Caenorhabditis elegans Hypothetical...    27   3.8  

>U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclase
           protein 11 protein.
          Length = 1032

 Score = 29.5 bits (63), Expect = 0.71
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -3

Query: 132 INDSSGSRTLHSVGPDSAIMTLLRNAALQ 46
           IN+S    T+HS GP  ++M LLRN  L+
Sbjct: 547 INESDLIFTIHSYGPRKSLMDLLRNDDLR 575


>Z78066-8|CAE48546.1|  204|Caenorhabditis elegans Hypothetical
           protein W06A7.3e protein.
          Length = 204

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 268 FRIYENVLQAVQKTNDGHPFKWLLEKD 348
           FR+++ V   ++KT+  HPF  +L +D
Sbjct: 58  FRVFKKVEAQIKKTDSEHPFSEILAQD 84


>Z78066-7|CAE48544.1|  570|Caenorhabditis elegans Hypothetical
           protein W06A7.3d protein.
          Length = 570

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 268 FRIYENVLQAVQKTNDGHPFKWLLEKD 348
           FR+++ V   ++KT+  HPF  +L +D
Sbjct: 424 FRVFKKVEAQIKKTDSEHPFSEILAQD 450


>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
            W06A7.3c protein.
          Length = 2484

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 268  FRIYENVLQAVQKTNDGHPFKWLLEKD 348
            FR+++ V   ++KT+  HPF  +L +D
Sbjct: 2338 FRVFKKVEAQIKKTDSEHPFSEILAQD 2364


>Z78066-5|CAB01523.1|  222|Caenorhabditis elegans Hypothetical
           protein W06A7.3b protein.
          Length = 222

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 268 FRIYENVLQAVQKTNDGHPFKWLLEKD 348
           FR+++ V   ++KT+  HPF  +L +D
Sbjct: 76  FRVFKKVEAQIKKTDSEHPFSEILAQD 102


>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
            W06A7.3a protein.
          Length = 2607

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +1

Query: 268  FRIYENVLQAVQKTNDGHPFKWLLEKD 348
            FR+++ V   ++KT+  HPF  +L +D
Sbjct: 2461 FRVFKKVEAQIKKTDSEHPFSEILAQD 2487


>AL034488-8|CAE46690.1|  395|Caenorhabditis elegans Hypothetical
           protein Y54G11A.8b protein.
          Length = 395

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 307 SFVQPGARSRRSGTRRPHGEHQQRGVREHRHDGTAGE 197
           S V+P A +  +GT R H    +   + HRH G+ G+
Sbjct: 11  STVRPVAAAFSTGTTRQHHSSGRSRQQHHRHGGSGGK 47


>AL034488-7|CAA22452.1|  396|Caenorhabditis elegans Hypothetical
           protein Y54G11A.8a protein.
          Length = 396

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 307 SFVQPGARSRRSGTRRPHGEHQQRGVREHRHDGTAGE 197
           S V+P A +  +GT R H    +   + HRH G+ G+
Sbjct: 11  STVRPVAAAFSTGTTRQHHSSGRSRQQHHRHGGSGGK 47


>AF039710-10|AAB96693.2|  393|Caenorhabditis elegans Hypothetical
           protein C46E10.9 protein.
          Length = 393

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 273 DLRERAPGCTKDQRWSPLQVAAGE 344
           DL   AP  T   RWSP+ V+  E
Sbjct: 326 DLTSSAPASTCSTRWSPMTVSTSE 349


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,060,759
Number of Sequences: 27780
Number of extensions: 81876
Number of successful extensions: 314
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)