Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_A10
(390 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces pomb... 31 0.063
SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase Ggt2|Schizosacc... 28 0.44
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 27 0.77
SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase |Schi... 27 1.0
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 1.0
SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase |Schizosac... 27 1.0
SPCC1494.04c |tyr1||prephenate dehydrogenase [NADP+] |Schizosacc... 27 1.4
SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi... 26 2.4
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos... 26 2.4
SPBC1604.03c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 3.1
SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase Gut2|Schi... 25 4.1
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 25 5.5
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 25 5.5
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 24 7.2
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 24 7.2
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 24 9.5
SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces p... 24 9.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 24 9.5
SPAC16A10.06c |nse2||Smc5-6 complex non-SMC subunit 2 |Schizosac... 24 9.5
>SPAC186.08c |||L-lactate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 31.1 bits (67), Expect = 0.063
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +2
Query: 23 VMASKFKSEKVGIVGSGLIGRSWA--MLFASVGYQVTLFDVVEKQITDAIADI 175
V +S FKS K+ IVG+G +G + A +L + + ++ + D+ +K+ D+
Sbjct: 13 VRSSSFKSIKIVIVGAGNVGSTTAFTLLLSGLAAEIVIIDLNKKKAEGEAMDL 65
>SPAC56E4.06c |ggt2||gamma-glutamyltranspeptidase
Ggt2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 28.3 bits (60), Expect = 0.44
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = -1
Query: 234 SAFRFPLRSPSFSKVFNCTLISAIASVICFSTTSNKVTW---YPTEANNIAHDLPISPLP 64
SA R P F + + ++S + S S N ++ YP E N ++DLPIS
Sbjct: 361 SAGRTQFGDPDFLPLDHLDVVSKLLSKEFASQIRNNISLSKTYPWEHYNPSYDLPISHGT 420
Query: 63 TIPTFSDLNLEAMTTRSVCN 4
T + D N A++ S N
Sbjct: 421 THVSTVDSNNLAVSITSTVN 440
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 27.5 bits (58), Expect = 0.77
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 269 LAIAVXDAIFVQECVPENLELKKKVFQNLDNVVDDNTI 382
L A + ++ +P + L KK+F+N +NVV+++++
Sbjct: 1284 LTYAFNEEKTIRASLPTLICLSKKIFENAENVVENHSL 1321
>SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 1.0
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +2
Query: 35 KFKSEKVGIVGSGLIGRSWAMLFASVGYQVTLFDVV 142
+ + + +GI+G G IG ++L ++G V +D++
Sbjct: 192 EIRGKTLGIIGYGHIGSQLSVLAEAMGLHVVYYDIL 227
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.1 bits (57), Expect = 1.0
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 3/123 (2%)
Frame = -1
Query: 372 SSTTLSKFWNTFFLSSKFSGTHSCTKIASXTAIAKSQVPFTHWN---CSSAFRFPLRSPS 202
SST LS + ++ + + + + S TA + S P T N +SA PL S +
Sbjct: 320 SSTPLSSVSSANSTTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVN 379
Query: 201 FSKVFNCTLISAIASVICFSTTSNKVTWYPTEANNIAHDLPISPLPTIPTFSDLNLEAMT 22
+ + T S+ STTS V+ + N + LP S + + P S N T
Sbjct: 380 ST---SATSASSTPLTSANSTTSTSVS-STAPSYNTSSVLPTSSVSSTP-LSSANSTTAT 434
Query: 21 TRS 13
+ S
Sbjct: 435 SAS 437
Score = 24.2 bits (50), Expect = 7.2
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = -1
Query: 372 SSTTLSKFWNTFFLSSKFSGTHSCTKIASXTAIAKSQVPFTHWNCSSAFRFPLRSPSF-- 199
SST L+ +T S+ S T T + S +A + S P T N +++ +PS+
Sbjct: 469 SSTPLTSVNSTTATSA--SST-PLTSVNSTSATSASSTPLTSANSTTSTSVSSTAPSYNT 525
Query: 198 SKVFNCTLISAIASVICFSTTSNKVTWYPTEANN 97
S V + +S+ STT+ + P + N
Sbjct: 526 SSVLPTSSVSSTPLSSANSTTATSASSTPLTSVN 559
>SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 340
Score = 27.1 bits (57), Expect = 1.0
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 47 EKVGIVGSGLIGRSWAMLFASVGYQV 124
++VGI+G G IG+S+A +G ++
Sbjct: 160 KRVGIIGMGAIGKSFAQKILPLGCEI 185
>SPCC1494.04c |tyr1||prephenate dehydrogenase [NADP+]
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 431
Score = 26.6 bits (56), Expect = 1.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 50 KVGIVGSGLIGRSWAMLFASVGYQVTLFD 136
+VGI+G G +GR +A + G++V + D
Sbjct: 6 QVGIIGFGDMGRLYAEYISKAGWRVNVCD 34
>SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase
Dld1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 25.8 bits (54), Expect = 2.4
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 47 EKVGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADI-KVQLKTLEKDGL 211
+K+ ++G G+IG +++ +G +VT+ + + ADI K + + K G+
Sbjct: 218 KKMTVLGGGIIGLEMGSVWSRLGAEVTVVEFLPAVGGPMDADISKALSRIISKQGI 273
>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 25.8 bits (54), Expect = 2.4
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 306 NASRKIWNSKRKYSKIWTMS-SMTTLSY 386
NA RK+WN +R+Y S S T +SY
Sbjct: 36 NAIRKLWNERRRYRMPKDESISPTPISY 63
>SPBC1604.03c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 330
Score = 25.4 bits (53), Expect = 3.1
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = -1
Query: 213 RSPSFSKVF---NCTLISAIASVICFSTTSNKVTWYPTEANNIAHDLPISPLPTIPT 52
R+P + K +CT ++ +A + + + + T A D I+P+PT+P+
Sbjct: 127 RNPEYIKGLCYDSCTPLANLAVGLSLNIQEVLIDCFATAACFTTEDTSINPIPTLPS 183
>SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase
Gut2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 649
Score = 25.0 bits (52), Expect = 4.1
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = -1
Query: 144 STTSNKVTWY-PTEANNIAH--DLPISPLPTIPTFSDLNLE 31
ST+ N+V ++ P + IA D P+S +PT PT S+ +++
Sbjct: 336 STSDNRVMFFLPWQGKVIAGTTDKPLSSVPTNPTPSEDDIQ 376
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 24.6 bits (51), Expect = 5.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1
Query: 348 WNTFFLSSKFSGTHS 304
WN FFL +KF HS
Sbjct: 364 WNIFFLCTKFWSLHS 378
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 24.6 bits (51), Expect = 5.5
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -3
Query: 217 P*ESIFL*SFQLHLNISD--CIGNLLLNNIEQSYLVSD 110
P E+I + + L ISD C+G LL I +Y+V +
Sbjct: 735 PIETIGVDKYTTFLFISDKKCVGLLLAERISSAYIVDE 772
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 24.2 bits (50), Expect = 7.2
Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 3/19 (15%)
Frame = -1
Query: 141 TTSNKVTWYPT---EANNI 94
TT ++V WYPT EAN I
Sbjct: 21 TTGSEVAWYPTALDEANEI 39
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 24.2 bits (50), Expect = 7.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 381 IVLSSTTLSKFWNTFF 334
+VL T +K+WN FF
Sbjct: 310 VVLKMCTKTKYWNVFF 325
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 23.8 bits (49), Expect = 9.5
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 287 DAIFVQECVPENLELKKK 340
DA V E +P N+ELKKK
Sbjct: 64 DADAVDEEMPSNVELKKK 81
>SPAC17A2.06c |vps8||WD repeat protein Vps8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1272
Score = 23.8 bits (49), Expect = 9.5
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 302 QECVPENLELKKKVFQNLDNVVDDNTILS 388
+ C NL++ K NLD+++ D + +S
Sbjct: 222 KHCTSWNLDMSKSNSLNLDSIIVDTSSIS 250
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 23.8 bits (49), Expect = 9.5
Identities = 26/98 (26%), Positives = 33/98 (33%), Gaps = 1/98 (1%)
Frame = -1
Query: 309 HSCTKIASXTAIAKSQVPFTHWNCSSAFRFPLRS-PSFSKVFNCTLISAIASVICFSTTS 133
+S T + S P T NC+++ P S P S T + SV TS
Sbjct: 404 NSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSV---PYTS 460
Query: 132 NKVTWYPTEANNIAHDLPISPLPTIPTFSDLNLEAMTT 19
VT P N I T T + L TT
Sbjct: 461 TPVTSTPLTTTNCTTSTSIPYTSTPVTSTPLTTTNCTT 498
>SPAC16A10.06c |nse2||Smc5-6 complex non-SMC subunit 2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 250
Score = 23.8 bits (49), Expect = 9.5
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = -1
Query: 288 SXTAIAKSQVPFTHWNCSSAFRFPLRSPSFSKVFNCTLISA 166
S A++++ +P +CS F+ S +V C L++A
Sbjct: 9 SLEALSQNLLPGNQNHCSFDFQLKEIDDSIKQVIKCALVAA 49
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,696,834
Number of Sequences: 5004
Number of extensions: 32974
Number of successful extensions: 112
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 128029482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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