Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_A10
(390 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 1e-04
SB_53765| Best HMM Match : 3HCDH_N (HMM E-Value=9.2e-12) 41 4e-04
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.083
SB_8863| Best HMM Match : DAO (HMM E-Value=0.04) 32 0.14
SB_22397| Best HMM Match : DAO (HMM E-Value=7.6e-06) 31 0.44
SB_15161| Best HMM Match : MAP1B_neuraxin (HMM E-Value=2.7) 31 0.44
SB_57609| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.58
SB_9370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_17988| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_45640| Best HMM Match : Epimerase (HMM E-Value=9.4e-38) 27 4.1
SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.1
SB_38953| Best HMM Match : 7tm_1 (HMM E-Value=1.4) 27 5.4
SB_14751| Best HMM Match : DUF1602 (HMM E-Value=1.9) 27 5.4
SB_43678| Best HMM Match : Ribonuclease_BN (HMM E-Value=0.81) 27 7.2
SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23) 27 7.2
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_41180| Best HMM Match : DUF229 (HMM E-Value=0) 27 7.2
SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17) 26 9.5
>SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 812
Score = 42.3 bits (95), Expect = 1e-04
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = +2
Query: 53 VGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADIKVQLKTLEKDGLLRGNLNA 232
V ++G+GL+G A A G +V L+D Q + ++ +Q +K+ L R + A
Sbjct: 8 VAVIGAGLMGTCIAGELAYHGARVNLYD-RSAQAMEKSKEMLIQ----QKEQLKREEVMA 62
Query: 233 DEQFQCVKGTCD-LAIAVXDAIFVQECVPENLELKKKVFQNLDNVVDDNTILS 388
F C+ L AV ++ + E ENLE+KK VF+++ N +++
Sbjct: 63 TSDFIGTVAFCESLEEAVVNSGLIFEATIENLEVKKSVFKSISQFCRTNAVIA 115
>SB_53765| Best HMM Match : 3HCDH_N (HMM E-Value=9.2e-12)
Length = 120
Score = 40.7 bits (91), Expect = 4e-04
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2
Query: 305 ECVPENLELKKKVFQNLDNVVDDNTIL 385
EC PENLELKKKVFQNL+ + + ++
Sbjct: 1 ECTPENLELKKKVFQNLEATLSSSEVI 27
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 33.1 bits (72), Expect = 0.083
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 209 LLRGNLNADEQFQ--CVKGTCDLAIAVXDAIFVQECVPENL 325
LLR + DE + C++ CD+A+ V D F+ +CV ++L
Sbjct: 806 LLRDTNDTDECMKECCLRDECDVAVMVSDYCFMADCVSDSL 846
>SB_8863| Best HMM Match : DAO (HMM E-Value=0.04)
Length = 485
Score = 32.3 bits (70), Expect = 0.14
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 50 KVGIVGSGLIGRSWAMLFASVGYQVTLFD 136
+V IVG GL+G A+ FA GY+V L++
Sbjct: 165 EVAIVGGGLVGALSAVFFAKRGYKVDLYE 193
>SB_22397| Best HMM Match : DAO (HMM E-Value=7.6e-06)
Length = 456
Score = 30.7 bits (66), Expect = 0.44
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +2
Query: 26 MASKFKSEKVGIVGSGLIGRSWAMLFASVGYQVTL 130
++S F ++V ++G+G+IG + A + GY+VT+
Sbjct: 13 LSSPFGGQRVLVIGAGVIGLTTAYELLTAGYEVTV 47
>SB_15161| Best HMM Match : MAP1B_neuraxin (HMM E-Value=2.7)
Length = 210
Score = 30.7 bits (66), Expect = 0.44
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 138 TSNKVTWYPTEANNIAHDLPISPLPTIPTFSDLNL 34
TS K +WYP N D+P+S LP+I S + L
Sbjct: 55 TSEKNSWYPNPEN----DIPLSTLPSIQPLSKVKL 85
>SB_57609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 416
Score = 30.3 bits (65), Expect = 0.58
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 50 KVGIVGSGLIGRSWAMLFASVGYQVTLFDVVE 145
KVGIVGSG+ G S A L G +V L++ E
Sbjct: 2 KVGIVGSGIAGLSAAWLLTLRGNEVHLYEKQE 33
>SB_9370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 41 KSEKVGIVGSGLIGRSWAMLFASVGYQVTLFDVVEK 148
KS KV IVGSG+ G A S G VT+ + E+
Sbjct: 249 KSPKVIIVGSGIAGLMAARQLQSFGIDVTMVEARER 284
>SB_17988| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 28.3 bits (60), Expect = 2.4
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 251 VKGTCDLAIAVXDAIFVQECVPENLELKKKVFQNLD 358
+K + D+ +V DA V E + ENL K K+F LD
Sbjct: 13 LKISLDVPGSVADADLVIEAIVENLRTKHKLFTALD 48
>SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3051
Score = 28.3 bits (60), Expect = 2.4
Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 15/88 (17%)
Frame = +2
Query: 107 SVGYQVTLFDVVEKQITDAIADIK-VQLKTLEKDGLLRGNLNADE--------------Q 241
S Y + V +++ +A+ K Q +E D L+G +NA + Q
Sbjct: 1981 SAFYNPKIAFVTHRKVFEAVISHKRCQSSVIENDVTLQGGINAGKFTDLGQMTDMQECVQ 2040
Query: 242 FQCVKGTCDLAIAVXDAIFVQECVPENL 325
C K TCD+A + D + C+ L
Sbjct: 2041 RCCAKSTCDVAFMLEDECYGVSCISNTL 2068
>SB_45640| Best HMM Match : Epimerase (HMM E-Value=9.4e-38)
Length = 451
Score = 27.5 bits (58), Expect = 4.1
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Frame = +2
Query: 65 GSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAI-ADIKVQLKTLEKDGLLRGNLNADEQ 241
G+G +G S + GY+VT++D I+ +L+ + D L G+L+
Sbjct: 148 GAGYLGSSLVPILLDQGYKVTVYDRFLWGISSLYPCASNPRLQIINGDILDVGHLS---- 203
Query: 242 FQCVKGTCDLAIAVXDAIFVQECVPENLELKKKVFQNLDNVVD 370
QC+ CD I + + C + + + Q NVVD
Sbjct: 204 -QCI-SECDAVIHLASIVGYPACEKDPQKATEVNEQGTRNVVD 244
>SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1810
Score = 27.5 bits (58), Expect = 4.1
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = -1
Query: 228 FRFPLRSPSFSKVFNCTLISAIASVICFSTTSNKVTWYPTEANNIAHDLPISPLPTIPTF 49
+ FPL KV + + S+IAS + S S W P+ A + L +SP+ P
Sbjct: 672 YPFPLEPGWGLKVVSASSSSSIASSVPSSMYSGPTPWIPSSA--ARYTLAVSPMLQSPRS 729
Query: 48 S 46
S
Sbjct: 730 S 730
>SB_38953| Best HMM Match : 7tm_1 (HMM E-Value=1.4)
Length = 324
Score = 27.1 bits (57), Expect = 5.4
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 16 ACRHGFQV*IGKSWNCWEWTDREIMGY--VVRFSRIPSNFVRC 138
AC H F +G S W+W R+ +GY V+R S RC
Sbjct: 11 ACHHFFHFFVGASGARWQWL-RQCVGYTSVLRMLVSVSGARRC 52
>SB_14751| Best HMM Match : DUF1602 (HMM E-Value=1.9)
Length = 334
Score = 27.1 bits (57), Expect = 5.4
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 114 PTEANNIAHDLPISPLPTIPT-FSDLNLEA 28
PT + + H P PLP IPT S ++L+A
Sbjct: 82 PTSPSLVYHSYPYKPLPRIPTSLSLVSLQA 111
>SB_43678| Best HMM Match : Ribonuclease_BN (HMM E-Value=0.81)
Length = 468
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -1
Query: 177 LISAIASVICFSTTSNKVTWYPTEANNIAHDLPIS 73
+++ +SV C T S+ VTW T ++++ + +S
Sbjct: 384 VVTVCSSVTCVVTVSSSVTWVVTVSSSVTWVVTVS 418
>SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23)
Length = 434
Score = 26.6 bits (56), Expect = 7.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 275 SLNHRYLSHIGTVHPHL 225
S H Y++H T HPH+
Sbjct: 20 STTHPYITHASTTHPHI 36
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Frame = -2
Query: 293 SHP--XRQSLNHRYLSHIGTVHPHLDFPLGVH 204
+HP S H Y+ H T HP++ + H
Sbjct: 42 THPYITHASTTHHYIVHASTTHPYITYASTTH 73
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 287 PXRQSLNHRYLSHIGTVHPHLDFPLGVHLS 198
P R+ L+HR+L H+ + ++D+P LS
Sbjct: 2661 PGRKPLSHRFLRHVPVI--YVDYPGATSLS 2688
>SB_41180| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 721
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 164 IADIKVQLKTLEKDGLLRGNLNADEQFQC 250
+ D K +T+E++G GNL A +QFQC
Sbjct: 184 LVDDKGPGQTIEEEG--PGNLEAQDQFQC 210
>SB_46059| Best HMM Match : Astacin (HMM E-Value=2.8e-17)
Length = 1775
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -1
Query: 249 HWNCSSAFRFPLRSPSFSKVFNCTLISAIASVICFSTTSNKVTW 118
H+NC P+ P FNC S + S + + S+K W
Sbjct: 1681 HYNCGGISPSPVTKPPPQSGFNCNFDSNMCSFV--NMGSDKFDW 1722
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,488,119
Number of Sequences: 59808
Number of extensions: 244209
Number of successful extensions: 732
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 681761575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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